RNA–Protein interactions for RNA: ENST00000273064.10

CNOT9-201, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT9, Length 4,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-201ENST00000273064 TRPM8Q7Z2W7 1104 aa15.32■□□□□ 0.04
CNOT9-201ENST00000273064 IFT122Q9HBG6 1241 aa15.32■□□□□ 0.04
CNOT9-201ENST00000273064 PDGFCQ9NRA1 345 aa15.32■□□□□ 0.04
CNOT9-201ENST00000273064 TSR3Q9UJK0 312 aaKnown RBP15.32■□□□□ 0.04
CNOT9-201ENST00000273064 PCDHA2Q9Y5H9 948 aa15.32■□□□□ 0.04
CNOT9-201ENST00000273064 KIAA0391O15091 583 aaKnown RBP15.32■□□□□ 0.04
CNOT9-201ENST00000273064 SERPINB6P35237 376 aa15.32■□□□□ 0.04
CNOT9-201ENST00000273064 PLCB4Q15147 1175 aa15.32■□□□□ 0.04
CNOT9-201ENST00000273064 C4orf50Q6ZRC1 276 aa15.32■□□□□ 0.04
CNOT9-201ENST00000273064 TRMT10CQ7L0Y3 403 aaKnown RBP15.32■□□□□ 0.04
CNOT9-201ENST00000273064 BEST2Q8NFU1 509 aa15.32■□□□□ 0.04
CNOT9-201ENST00000273064 CCHCR1Q8TD31 782 aa15.32■□□□□ 0.04
CNOT9-201ENST00000273064 TMC2Q8TDI7 906 aa15.32■□□□□ 0.04
CNOT9-201ENST00000273064 HASPINQ8TF76 798 aa15.32■□□□□ 0.04
CNOT9-201ENST00000273064 SHC3Q92529 594 aa15.32■□□□□ 0.04
CNOT9-201ENST00000273064 PNMA3Q9UL41 463 aa15.32■□□□□ 0.04
CNOT9-201ENST00000273064 NAALADL1Q9UQQ1 740 aa15.32■□□□□ 0.04
CNOT9-201ENST00000273064 KNL1Q8NG31 2342 aa15.32■□□□□ 0.04
CNOT9-201ENST00000273064 CCL15-CCL14A0A0B4J2E2 113 aa15.32■□□□□ 0.04
CNOT9-201ENST00000273064 IQANK1A0A1B0GTG1 560 aa15.32■□□□□ 0.04
CNOT9-201ENST00000273064 PDHA1P08559 390 aa15.32■□□□□ 0.04
CNOT9-201ENST00000273064 PECAM1P16284 738 aaPredicted RBP15.32■□□□□ 0.04
CNOT9-201ENST00000273064 RFC1P35251 1148 aaPredicted RBP15.32■□□□□ 0.04
CNOT9-201ENST00000273064 CCL15Q16663 113 aa15.32■□□□□ 0.04
CNOT9-201ENST00000273064 SPOUT1Q5T280 376 aaKnown RBP15.32■□□□□ 0.04
CNOT9-201ENST00000273064 AGBL2Q5U5Z8 902 aa15.32■□□□□ 0.04
CNOT9-201ENST00000273064 FAM71AQ8IYT1 594 aa15.32■□□□□ 0.04
CNOT9-201ENST00000273064 TTC13Q8NBP0 860 aa15.32■□□□□ 0.04
CNOT9-201ENST00000273064 NT5C1AQ9BXI3 368 aa15.32■□□□□ 0.04
CNOT9-201ENST00000273064 TRIM55Q9BYV6 548 aa15.32■□□□□ 0.04
CNOT9-201ENST00000273064 ASCC2Q9H1I8 757 aaPredicted RBP15.32■□□□□ 0.04
CNOT9-201ENST00000273064 ZC3H7BQ9UGR2 993 aaKnown RBP15.32■□□□□ 0.04
CNOT9-201ENST00000273064 USP15Q9Y4E8 981 aaPredicted RBP15.32■□□□□ 0.04
CNOT9-201ENST00000273064 ROBO1Q9Y6N7 1651 aa15.31■□□□□ 0.04
CNOT9-201ENST00000273064 RIPK2O43353 540 aa15.31■□□□□ 0.04
CNOT9-201ENST00000273064 BNIP3LO60238 219 aa15.31■□□□□ 0.04
CNOT9-201ENST00000273064 CYP2C9P11712 490 aa15.31■□□□□ 0.04
CNOT9-201ENST00000273064 ACAT1P24752 427 aaKnown RBP15.31■□□□□ 0.04
CNOT9-201ENST00000273064 ALDH5A1P51649 535 aaPredicted RBP15.31■□□□□ 0.04
CNOT9-201ENST00000273064 ATXN3P54252 364 aaPredicted RBP15.31■□□□□ 0.04
CNOT9-201ENST00000273064 RBP5P82980 135 aa15.31■□□□□ 0.04
CNOT9-201ENST00000273064 GOLGA7BQ2TAP0 167 aa15.31■□□□□ 0.04
CNOT9-201ENST00000273064 PACS2Q86VP3 889 aa15.31■□□□□ 0.04
CNOT9-201ENST00000273064 SMC1BQ8NDV3 1235 aa15.31■□□□□ 0.04
CNOT9-201ENST00000273064 CHST13Q8NET6 341 aa15.31■□□□□ 0.04
CNOT9-201ENST00000273064 HES6Q96HZ4 224 aa15.31■□□□□ 0.04
CNOT9-201ENST00000273064 FHDC1Q9C0D6 1143 aaPredicted RBP15.31■□□□□ 0.04
CNOT9-201ENST00000273064 C17orf75Q9HAS0 396 aa15.31■□□□□ 0.04
CNOT9-201ENST00000273064 SIX2Q9NPC8 291 aa15.31■□□□□ 0.04
CNOT9-201ENST00000273064 ZFP69BQ9UJL9 534 aa15.31■□□□□ 0.04
CNOT9-201ENST00000273064 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.31■□□□□ 0.04
CNOT9-201ENST00000273064 ZNF142P52746 1687 aaPredicted RBP15.31■□□□□ 0.04
CNOT9-201ENST00000273064 FAM47DPA6NHR8 397 aa15.31■□□□□ 0.04
CNOT9-201ENST00000273064 SLC26A4O43511 780 aa15.31■□□□□ 0.04
CNOT9-201ENST00000273064 PPFIA2O75334 1257 aa15.31■□□□□ 0.04
CNOT9-201ENST00000273064 STAT4Q14765 748 aa15.31■□□□□ 0.04
CNOT9-201ENST00000273064 C15orf59Q2T9L4 293 aaPredicted RBP15.31■□□□□ 0.04
CNOT9-201ENST00000273064 GCOM2Q9BZD3 368 aaPredicted RBP15.31■□□□□ 0.04
CNOT9-201ENST00000273064 PCMTD2Q9NV79 361 aa15.31■□□□□ 0.04
CNOT9-201ENST00000273064 PCDHA3Q9Y5H8 950 aa15.31■□□□□ 0.04
CNOT9-201ENST00000273064 O00370 1275 aa15.31■□□□□ 0.04
CNOT9-201ENST00000273064 GYG2O15488 501 aa15.31■□□□□ 0.04
CNOT9-201ENST00000273064 BMPR2Q13873 1038 aa15.31■□□□□ 0.04
CNOT9-201ENST00000273064 PIGHQ14442 188 aaPredicted RBP15.31■□□□□ 0.04
CNOT9-201ENST00000273064 ASTE1Q2TB18 679 aaPredicted RBP15.31■□□□□ 0.04
CNOT9-201ENST00000273064 PARP9Q8IXQ6 854 aa15.31■□□□□ 0.04
CNOT9-201ENST00000273064 HACE1Q8IYU2 909 aa15.31■□□□□ 0.04
CNOT9-201ENST00000273064 ANKRD13AQ8IZ07 590 aa15.31■□□□□ 0.04
CNOT9-201ENST00000273064 PGBD4Q96DM1 585 aa15.31■□□□□ 0.04
CNOT9-201ENST00000273064 MRIQ9BWK5 157 aa15.31■□□□□ 0.04
CNOT9-201ENST00000273064 SLC40A1Q9NP59 571 aa15.31■□□□□ 0.04
CNOT9-201ENST00000273064 MYO5AQ9Y4I1 1855 aaKnown RBP15.31■□□□□ 0.04
CNOT9-201ENST00000273064 NUP98P52948 1817 aa15.31■□□□□ 0.04
CNOT9-201ENST00000273064 GON4LQ3T8J9 2241 aa15.3■□□□□ 0.04
CNOT9-201ENST00000273064 XPOTO43592 962 aaKnown RBP15.3■□□□□ 0.04
CNOT9-201ENST00000273064 CAV1Q03135 178 aa15.3■□□□□ 0.04
CNOT9-201ENST00000273064 PRAMEF19Q5SWL8 479 aa15.3■□□□□ 0.04
CNOT9-201ENST00000273064 ADAM32Q8TC27 787 aa15.3■□□□□ 0.04
CNOT9-201ENST00000273064 RXFP2Q8WXD0 754 aa15.3■□□□□ 0.04
CNOT9-201ENST00000273064 FAM111AQ96PZ2 611 aa15.3■□□□□ 0.04
CNOT9-201ENST00000273064 CGRRF1Q99675 332 aa15.3■□□□□ 0.04
CNOT9-201ENST00000273064 CCT8L1PA6NM43 557 aa15.3■□□□□ 0.04
CNOT9-201ENST00000273064 ADCY3O60266 1144 aa15.3■□□□□ 0.04
CNOT9-201ENST00000273064 TTC4O95801 387 aa15.3■□□□□ 0.04
CNOT9-201ENST00000273064 RPS12P25398 132 aaKnown RBP15.3■□□□□ 0.04
CNOT9-201ENST00000273064 TARSP26639 723 aaKnown RBP15.3■□□□□ 0.04
CNOT9-201ENST00000273064 ADSSP30520 456 aa15.3■□□□□ 0.04
CNOT9-201ENST00000273064 ABCD1P33897 745 aa15.3■□□□□ 0.04
CNOT9-201ENST00000273064 FNTAP49354 379 aa15.3■□□□□ 0.04
CNOT9-201ENST00000273064 CLEC4DQ8WXI8 215 aa15.3■□□□□ 0.04
CNOT9-201ENST00000273064 FAM193BQ96PV7 902 aaPredicted RBP15.3■□□□□ 0.04
CNOT9-201ENST00000273064 RAB3IPQ96QF0 476 aaPredicted RBP15.3■□□□□ 0.04
CNOT9-201ENST00000273064 KIF9Q9HAQ2 790 aa15.3■□□□□ 0.04
CNOT9-201ENST00000273064 MYH6P13533 1939 aa15.3■□□□□ 0.04
CNOT9-201ENST00000273064 CHUKO15111 745 aa15.3■□□□□ 0.04
CNOT9-201ENST00000273064 HBP1O60381 514 aa15.3■□□□□ 0.04
CNOT9-201ENST00000273064 CRCPO75575 148 aa15.3■□□□□ 0.04
CNOT9-201ENST00000273064 CREB1P16220 341 aa15.3■□□□□ 0.04
CNOT9-201ENST00000273064 ADCYAP1R1P41586 468 aa15.3■□□□□ 0.04
CNOT9-201ENST00000273064 TNFAIP2Q03169 654 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms