RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 AMACRQ9UHK6 382 aa16.22■□□□□ 0.19
SF3B4-201ENST00000271628 FEZ2Q9UHY8 353 aaPredicted RBP16.22■□□□□ 0.19
SF3B4-201ENST00000271628 UBQLN1Q9UMX0 589 aaKnown RBP16.22■□□□□ 0.19
SF3B4-201ENST00000271628 UTP11Q9Y3A2 253 aaKnown RBP16.22■□□□□ 0.19
SF3B4-201ENST00000271628 PSTPIP1O43586 416 aa16.22■□□□□ 0.19
SF3B4-201ENST00000271628 HMGCRP04035 888 aa16.22■□□□□ 0.19
SF3B4-201ENST00000271628 ATF7P17544 494 aaPredicted RBP16.22■□□□□ 0.19
SF3B4-201ENST00000271628 CHRNA3P32297 505 aa16.22■□□□□ 0.19
SF3B4-201ENST00000271628 CARSP49589 748 aaKnown RBP16.22■□□□□ 0.19
SF3B4-201ENST00000271628 DHX34Q14147 1143 aaKnown RBP16.22■□□□□ 0.19
SF3B4-201ENST00000271628 DNAJC24Q6P3W2 148 aa16.22■□□□□ 0.19
SF3B4-201ENST00000271628 PHLDB2Q86SQ0 1253 aa16.22■□□□□ 0.19
SF3B4-201ENST00000271628 RHOT1Q8IXI2 618 aa16.22■□□□□ 0.19
SF3B4-201ENST00000271628 MAIP1Q8WWC4 291 aa16.22■□□□□ 0.19
SF3B4-201ENST00000271628 IFT81Q8WYA0 676 aa16.22■□□□□ 0.19
SF3B4-201ENST00000271628 RUNDC3BQ96NL0 473 aa16.22■□□□□ 0.19
SF3B4-201ENST00000271628 GTF2IRD1Q9UHL9 959 aa16.22■□□□□ 0.19
SF3B4-201ENST00000271628 TMEM191CA6NGB0 347 aa16.21■□□□□ 0.19
SF3B4-201ENST00000271628 CD4P01730 458 aa16.21■□□□□ 0.19
SF3B4-201ENST00000271628 GUCY2FP51841 1108 aa16.21■□□□□ 0.19
SF3B4-201ENST00000271628 CNGA2Q16280 664 aa16.21■□□□□ 0.19
SF3B4-201ENST00000271628 LLGL2Q6P1M3 1020 aa16.21■□□□□ 0.19
SF3B4-201ENST00000271628 SLC13A5Q86YT5 568 aaPredicted RBP16.21■□□□□ 0.19
SF3B4-201ENST00000271628 MREGQ8N565 214 aa16.21■□□□□ 0.19
SF3B4-201ENST00000271628 C3orf20Q8ND61 904 aa16.21■□□□□ 0.19
SF3B4-201ENST00000271628 ZMAT2Q96NC0 199 aaKnown RBP16.21■□□□□ 0.19
SF3B4-201ENST00000271628 TRIM7Q9C029 511 aa16.21■□□□□ 0.19
SF3B4-201ENST00000271628 RAB17Q9H0T7 212 aa16.21■□□□□ 0.19
SF3B4-201ENST00000271628 WDR35Q9P2L0 1181 aa16.21■□□□□ 0.19
SF3B4-201ENST00000271628 TRIP11Q15643 1979 aa16.2■□□□□ 0.18
SF3B4-201ENST00000271628 MYADML2A6NDP7 307 aa16.2■□□□□ 0.18
SF3B4-201ENST00000271628 BHMG1C9JSJ3 638 aaPredicted RBP16.2■□□□□ 0.18
SF3B4-201ENST00000271628 PHF2O75151 1096 aa16.2■□□□□ 0.18
SF3B4-201ENST00000271628 RECQL4O94761 1208 aa16.2■□□□□ 0.18
SF3B4-201ENST00000271628 STILQ15468 1287 aa16.2■□□□□ 0.18
SF3B4-201ENST00000271628 DCUN1D2Q6PH85 259 aa16.2■□□□□ 0.18
SF3B4-201ENST00000271628 CASKIN2Q8WXE0 1202 aa16.2■□□□□ 0.18
SF3B4-201ENST00000271628 NT5C1AQ9BXI3 368 aa16.2■□□□□ 0.18
SF3B4-201ENST00000271628 ELOVL4Q9GZR5 314 aa16.2■□□□□ 0.18
SF3B4-201ENST00000271628 RASSF4Q9H2L5 321 aa16.2■□□□□ 0.18
SF3B4-201ENST00000271628 NXF3Q9H4D5 531 aaKnown RBP16.2■□□□□ 0.18
SF3B4-201ENST00000271628 NFU1Q9UMS0 254 aa16.2■□□□□ 0.18
SF3B4-201ENST00000271628 NR2E1Q9Y466 385 aa16.2■□□□□ 0.18
SF3B4-201ENST00000271628 HES2Q9Y543 173 aa16.2■□□□□ 0.18
SF3B4-201ENST00000271628 TCRBV5S1A1TA0A578 114 aa16.2■□□□□ 0.18
SF3B4-201ENST00000271628 FAM187AA6NFU0 413 aa16.2■□□□□ 0.18
SF3B4-201ENST00000271628 ZSCAN5CA6NGD5 496 aaPredicted RBP16.2■□□□□ 0.18
SF3B4-201ENST00000271628 KIF3CO14782 793 aa16.2■□□□□ 0.18
SF3B4-201ENST00000271628 DR1Q01658 176 aa16.2■□□□□ 0.18
SF3B4-201ENST00000271628 PRKCZQ05513 592 aa16.2■□□□□ 0.18
SF3B4-201ENST00000271628 PIGHQ14442 188 aaPredicted RBP16.2■□□□□ 0.18
SF3B4-201ENST00000271628 NBPF20Q3BBV1 942 aa16.2■□□□□ 0.18
SF3B4-201ENST00000271628 SGO2Q562F6 1265 aa16.2■□□□□ 0.18
SF3B4-201ENST00000271628 XKR4Q5GH76 650 aa16.2■□□□□ 0.18
SF3B4-201ENST00000271628 AADACL2Q6P093 401 aa16.2■□□□□ 0.18
SF3B4-201ENST00000271628 DENND1BQ6P3S1 775 aa16.2■□□□□ 0.18
SF3B4-201ENST00000271628 ADAT2Q7Z6V5 191 aaKnown RBP16.2■□□□□ 0.18
SF3B4-201ENST00000271628 CPNE8Q86YQ8 564 aa16.2■□□□□ 0.18
SF3B4-201ENST00000271628 TSEN2Q8NCE0 465 aaKnown RBP16.2■□□□□ 0.18
SF3B4-201ENST00000271628 SEC14L1Q92503 715 aa16.2■□□□□ 0.18
SF3B4-201ENST00000271628 HEXIM2Q96MH2 286 aaKnown RBP16.2■□□□□ 0.18
SF3B4-201ENST00000271628 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.2■□□□□ 0.18
SF3B4-201ENST00000271628 CASP8AP2Q9UKL3 1982 aa16.19■□□□□ 0.18
SF3B4-201ENST00000271628 ESYT3A0FGR9 886 aa16.19■□□□□ 0.18
SF3B4-201ENST00000271628 FSCN2O14926 492 aa16.19■□□□□ 0.18
SF3B4-201ENST00000271628 PGK1P00558 417 aa16.19■□□□□ 0.18
SF3B4-201ENST00000271628 KCNE1P15382 129 aa16.19■□□□□ 0.18
SF3B4-201ENST00000271628 IRAK1P51617 712 aa16.19■□□□□ 0.18
SF3B4-201ENST00000271628 NDST1P52848 882 aa16.19■□□□□ 0.18
SF3B4-201ENST00000271628 GSCP56915 257 aaPredicted RBP16.19■□□□□ 0.18
SF3B4-201ENST00000271628 SP3Q02447 781 aa16.19■□□□□ 0.18
SF3B4-201ENST00000271628 CACNB2Q08289 660 aaPredicted RBP16.19■□□□□ 0.18
SF3B4-201ENST00000271628 CYP1B1Q16678 543 aa16.19■□□□□ 0.18
SF3B4-201ENST00000271628 PPP1R15BQ5SWA1 713 aa16.19■□□□□ 0.18
SF3B4-201ENST00000271628 FOXR1Q6PIV2 292 aa16.19■□□□□ 0.18
SF3B4-201ENST00000271628 CXCL17Q6UXB2 119 aa16.19■□□□□ 0.18
SF3B4-201ENST00000271628 IQCKQ8N0W5 287 aa16.19■□□□□ 0.18
SF3B4-201ENST00000271628 C18orf8Q96DM3 657 aa16.19■□□□□ 0.18
SF3B4-201ENST00000271628 TWNKQ96RR1 684 aa16.19■□□□□ 0.18
SF3B4-201ENST00000271628 CAPS2Q9BXY5 557 aa16.19■□□□□ 0.18
SF3B4-201ENST00000271628 FAM114A2Q9NRY5 505 aa16.19■□□□□ 0.18
SF3B4-201ENST00000271628 PCYOX1Q9UHG3 505 aa16.19■□□□□ 0.18
SF3B4-201ENST00000271628 RSPH14Q9UHP6 348 aa16.19■□□□□ 0.18
SF3B4-201ENST00000271628 RASAL2Q9UJF2 1139 aa16.19■□□□□ 0.18
SF3B4-201ENST00000271628 SCN10AQ9Y5Y9 1956 aa16.19■□□□□ 0.18
SF3B4-201ENST00000271628 TTI1O43156 1089 aa16.18■□□□□ 0.18
SF3B4-201ENST00000271628 AKAP5P24588 427 aa16.18■□□□□ 0.18
SF3B4-201ENST00000271628 CETN2P41208 172 aa16.18■□□□□ 0.18
SF3B4-201ENST00000271628 PNPLA4P41247 253 aa16.18■□□□□ 0.18
SF3B4-201ENST00000271628 RPL7AP62424 266 aaKnown RBP16.18■□□□□ 0.18
SF3B4-201ENST00000271628 MRPS6P82932 125 aaKnown RBP16.18■□□□□ 0.18
SF3B4-201ENST00000271628 ZNF268Q14587 947 aaPredicted RBP16.18■□□□□ 0.18
SF3B4-201ENST00000271628 DNAJC21Q5F1R6 531 aaKnown RBP16.18■□□□□ 0.18
SF3B4-201ENST00000271628 UBXN11Q5T124 520 aa16.18■□□□□ 0.18
SF3B4-201ENST00000271628 PRELID2Q8N945 189 aa16.18■□□□□ 0.18
SF3B4-201ENST00000271628 MAGOHBQ96A72 148 aaKnown RBP16.18■□□□□ 0.18
SF3B4-201ENST00000271628 DDX27Q96GQ7 796 aaKnown RBP16.18■□□□□ 0.18
SF3B4-201ENST00000271628 MIS12Q9H081 205 aa16.18■□□□□ 0.18
SF3B4-201ENST00000271628 PLEKHA4Q9H4M7 779 aa16.18■□□□□ 0.18
SF3B4-201ENST00000271628 ERVK-5Q9HDB9 667 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms