RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 RSBN1LQ6PCB5 846 aaPredicted RBP17.81■□□□□ 0.44
RTN1-201ENST00000267484 ZFP69BQ9UJL9 534 aa17.81■□□□□ 0.44
RTN1-201ENST00000267484 CTDP1Q9Y5B0 961 aaPredicted RBP17.81■□□□□ 0.44
RTN1-201ENST00000267484 ZNF646O15015 1829 aaPredicted RBP17.8■□□□□ 0.44
RTN1-201ENST00000267484 A0A0G2JND7 137 aa17.8■□□□□ 0.44
RTN1-201ENST00000267484 LRRIQ4A6NIV6 560 aa17.8■□□□□ 0.44
RTN1-201ENST00000267484 ASNSP08243 561 aa17.8■□□□□ 0.44
RTN1-201ENST00000267484 GNAZP19086 355 aa17.8■□□□□ 0.44
RTN1-201ENST00000267484 ALDH3A1P30838 453 aa17.8■□□□□ 0.44
RTN1-201ENST00000267484 GCKP35557 465 aa17.8■□□□□ 0.44
RTN1-201ENST00000267484 PSMD6Q15008 389 aa17.8■□□□□ 0.44
RTN1-201ENST00000267484 PHF13Q86YI8 300 aaPredicted RBP17.8■□□□□ 0.44
RTN1-201ENST00000267484 TEX2Q8IWB9 1127 aa17.8■□□□□ 0.44
RTN1-201ENST00000267484 RCOR2Q8IZ40 523 aa17.8■□□□□ 0.44
RTN1-201ENST00000267484 WDR83Q9BRX9 315 aaKnown RBP17.8■□□□□ 0.44
RTN1-201ENST00000267484 TJP2Q9UDY2 1190 aa17.8■□□□□ 0.44
RTN1-201ENST00000267484 CCDC189A1A4V9 331 aa17.8■□□□□ 0.44
RTN1-201ENST00000267484 ONECUT3O60422 494 aaPredicted RBP17.8■□□□□ 0.44
RTN1-201ENST00000267484 SMNDC1O75940 238 aaKnown RBP eCLIP17.8■□□□□ 0.44
RTN1-201ENST00000267484 CST3P01034 146 aaPredicted RBP17.8■□□□□ 0.44
RTN1-201ENST00000267484 TPBGLP0DKB5 382 aa17.8■□□□□ 0.44
RTN1-201ENST00000267484 CALB2P22676 271 aa17.8■□□□□ 0.44
RTN1-201ENST00000267484 RHPN2Q8IUC4 686 aa17.8■□□□□ 0.44
RTN1-201ENST00000267484 PTPRN2Q92932 1015 aa17.8■□□□□ 0.44
RTN1-201ENST00000267484 CYP26B1Q9NR63 512 aa17.8■□□□□ 0.44
RTN1-201ENST00000267484 ARHGAP28Q9P2N2 729 aa17.8■□□□□ 0.44
RTN1-201ENST00000267484 KANSL3Q9P2N6 904 aa17.8■□□□□ 0.44
RTN1-201ENST00000267484 IP6K2Q9UHH9 426 aa17.8■□□□□ 0.44
RTN1-201ENST00000267484 SCINQ9Y6U3 715 aa17.8■□□□□ 0.44
RTN1-201ENST00000267484 TMEM191CA6NGB0 347 aa17.79■□□□□ 0.44
RTN1-201ENST00000267484 TTLL13PA6NNM8 815 aa17.79■□□□□ 0.44
RTN1-201ENST00000267484 ALOX15BO15296 676 aa17.79■□□□□ 0.44
RTN1-201ENST00000267484 TMEM191BP0C7N4 346 aa17.79■□□□□ 0.44
RTN1-201ENST00000267484 POTEJP0CG39 1038 aa17.79■□□□□ 0.44
RTN1-201ENST00000267484 CETN2P41208 172 aa17.79■□□□□ 0.44
RTN1-201ENST00000267484 VCPP55072 806 aaKnown RBP17.79■□□□□ 0.44
RTN1-201ENST00000267484 CAPRIN2Q6IMN6 1127 aaKnown RBP17.79■□□□□ 0.44
RTN1-201ENST00000267484 CENPUQ71F23 418 aa17.79■□□□□ 0.44
RTN1-201ENST00000267484 TCP10LQ8TDR4 215 aa17.79■□□□□ 0.44
RTN1-201ENST00000267484 MIPEPQ99797 713 aa17.79■□□□□ 0.44
RTN1-201ENST00000267484 CYP39A1Q9NYL5 469 aa17.79■□□□□ 0.44
RTN1-201ENST00000267484 PSMC3IPQ9P2W1 217 aaPredicted RBP17.79■□□□□ 0.44
RTN1-201ENST00000267484 DOCK5Q9H7D0 1870 aa17.79■□□□□ 0.44
RTN1-201ENST00000267484 MYH9P35579 1960 aaKnown RBP17.79■□□□□ 0.44
RTN1-201ENST00000267484 hCG_1818297A0A087WSY0 165 aa17.79■□□□□ 0.44
RTN1-201ENST00000267484 DCTN3O75935 186 aa17.79■□□□□ 0.44
RTN1-201ENST00000267484 OASLQ15646 514 aaKnown RBP17.79■□□□□ 0.44
RTN1-201ENST00000267484 SCARA5Q6ZMJ2 495 aa17.79■□□□□ 0.44
RTN1-201ENST00000267484 LRRC6Q86X45 466 aa17.79■□□□□ 0.44
RTN1-201ENST00000267484 AGGF1Q8N302 714 aaeCLIP17.79■□□□□ 0.44
RTN1-201ENST00000267484 ZNF526Q8TF50 670 aaPredicted RBP17.79■□□□□ 0.44
RTN1-201ENST00000267484 STK32AQ8WU08 396 aa17.79■□□□□ 0.44
RTN1-201ENST00000267484 RBM41Q96IZ5 413 aaKnown RBP17.79■□□□□ 0.44
RTN1-201ENST00000267484 ZNF277Q9NRM2 450 aaPredicted RBP17.79■□□□□ 0.44
RTN1-201ENST00000267484 FBXO40Q9UH90 709 aa17.79■□□□□ 0.44
RTN1-201ENST00000267484 SMG5Q9UPR3 1016 aaKnown RBP17.79■□□□□ 0.44
RTN1-201ENST00000267484 RGS20O76081 388 aa17.79■□□□□ 0.44
RTN1-201ENST00000267484 ITGBL1O95965 494 aaPredicted RBP17.79■□□□□ 0.44
RTN1-201ENST00000267484 NR3C2P08235 984 aa17.79■□□□□ 0.44
RTN1-201ENST00000267484 MMP8P22894 467 aa17.79■□□□□ 0.44
RTN1-201ENST00000267484 CTCFP49711 727 aaPredicted RBP17.79■□□□□ 0.44
RTN1-201ENST00000267484 ERFP50548 548 aa17.79■□□□□ 0.44
RTN1-201ENST00000267484 HIF1AQ16665 826 aa17.79■□□□□ 0.44
RTN1-201ENST00000267484 PARP6Q2NL67 630 aa17.79■□□□□ 0.44
RTN1-201ENST00000267484 DNAJC24Q6P3W2 148 aa17.79■□□□□ 0.44
RTN1-201ENST00000267484 C3orf62Q6ZUJ4 267 aa17.79■□□□□ 0.44
RTN1-201ENST00000267484 ASAP3Q8TDY4 903 aa17.79■□□□□ 0.44
RTN1-201ENST00000267484 TTC25Q96NG3 672 aa17.79■□□□□ 0.44
RTN1-201ENST00000267484 BATF3Q9NR55 127 aa17.79■□□□□ 0.44
RTN1-201ENST00000267484 RABGEF1Q9UJ41 708 aa17.79■□□□□ 0.44
RTN1-201ENST00000267484 CFAP69A5D8W1 941 aa17.78■□□□□ 0.44
RTN1-201ENST00000267484 LMNB2Q03252 620 aa17.78■□□□□ 0.44
RTN1-201ENST00000267484 NR1H3Q13133 447 aa17.78■□□□□ 0.44
RTN1-201ENST00000267484 SEPT7Q16181 437 aaKnown RBP17.78■□□□□ 0.44
RTN1-201ENST00000267484 TDRPQ86YL5 185 aa17.78■□□□□ 0.44
RTN1-201ENST00000267484 TMEM130Q8N3G9 435 aa17.78■□□□□ 0.44
RTN1-201ENST00000267484 PYROXD1Q8WU10 500 aa17.78■□□□□ 0.44
RTN1-201ENST00000267484 ATG4CQ96DT6 458 aa17.78■□□□□ 0.44
RTN1-201ENST00000267484 OSBPL1AQ9BXW6 950 aa17.78■□□□□ 0.44
RTN1-201ENST00000267484 PCNTO95613 3336 aa17.78■□□□□ 0.44
RTN1-201ENST00000267484 DGAT1O75907 488 aa17.78■□□□□ 0.44
RTN1-201ENST00000267484 MTMR2Q13614 643 aa17.78■□□□□ 0.44
RTN1-201ENST00000267484 MORF4L2Q15014 288 aa17.78■□□□□ 0.44
RTN1-201ENST00000267484 BBS9Q3SYG4 887 aa17.78■□□□□ 0.44
RTN1-201ENST00000267484 ACTL9Q8TC94 416 aa17.78■□□□□ 0.44
RTN1-201ENST00000267484 PAFAH2Q99487 392 aa17.78■□□□□ 0.44
RTN1-201ENST00000267484 MSTO1Q9BUK6 570 aa17.78■□□□□ 0.44
RTN1-201ENST00000267484 YIPF3Q9GZM5 350 aa17.78■□□□□ 0.44
RTN1-201ENST00000267484 FBXO6Q9NRD1 293 aaPredicted RBP17.78■□□□□ 0.44
RTN1-201ENST00000267484 KAT6AQ92794 2004 aa17.78■□□□□ 0.44
RTN1-201ENST00000267484 CD48P09326 243 aa17.78■□□□□ 0.44
RTN1-201ENST00000267484 TNFSF9P41273 254 aa17.78■□□□□ 0.44
RTN1-201ENST00000267484 C1QBPQ07021 282 aaKnown RBP17.78■□□□□ 0.44
RTN1-201ENST00000267484 NCOA4Q13772 614 aa17.78■□□□□ 0.44
RTN1-201ENST00000267484 PDLIM7Q9NR12 457 aa17.78■□□□□ 0.44
RTN1-201ENST00000267484 ENO4A6NNW6 628 aa17.77■□□□□ 0.44
RTN1-201ENST00000267484 WEE2P0C1S8 567 aa17.77■□□□□ 0.44
RTN1-201ENST00000267484 PCK1P35558 622 aa17.77■□□□□ 0.44
RTN1-201ENST00000267484 CDKN2BP42772 138 aa17.77■□□□□ 0.44
RTN1-201ENST00000267484 PTDSS1P48651 473 aaKnown RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms