RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 COL4A1P02462 1669 aa15.24■□□□□ 0.03
PDLIM2-201ENST00000265810 DARSP14868 501 aaKnown RBP15.24■□□□□ 0.03
PDLIM2-201ENST00000265810 VEPH1Q14D04 833 aa15.24■□□□□ 0.03
PDLIM2-201ENST00000265810 EMBQ6PCB8 327 aa15.24■□□□□ 0.03
PDLIM2-201ENST00000265810 SH3TC2Q8TF17 1288 aa15.24■□□□□ 0.03
PDLIM2-201ENST00000265810 ZNF518BQ9C0D4 1074 aa15.24■□□□□ 0.03
PDLIM2-201ENST00000265810 WNK3Q9BYP7 1800 aa15.24■□□□□ 0.03
PDLIM2-201ENST00000265810 A0A0U1RQJ8 604 aa15.24■□□□□ 0.03
PDLIM2-201ENST00000265810 ATP1A2P50993 1020 aa15.24■□□□□ 0.03
PDLIM2-201ENST00000265810 SCNN1GP51170 649 aa15.24■□□□□ 0.03
PDLIM2-201ENST00000265810 SNX17Q15036 470 aa15.24■□□□□ 0.03
PDLIM2-201ENST00000265810 ANKRD42Q8N9B4 389 aa15.24■□□□□ 0.03
PDLIM2-201ENST00000265810 ZSWIM2Q8NEG5 633 aa15.24■□□□□ 0.03
PDLIM2-201ENST00000265810 MGARPQ8TDB4 240 aa15.24■□□□□ 0.03
PDLIM2-201ENST00000265810 EPS8L1Q8TE68 723 aa15.24■□□□□ 0.03
PDLIM2-201ENST00000265810 TMEM169Q96HH4 297 aa15.24■□□□□ 0.03
PDLIM2-201ENST00000265810 FAM118BQ9BPY3 351 aa15.24■□□□□ 0.03
PDLIM2-201ENST00000265810 OSBPL8Q9BZF1 889 aa15.24■□□□□ 0.03
PDLIM2-201ENST00000265810 TMEM39AQ9NV64 488 aa15.24■□□□□ 0.03
PDLIM2-201ENST00000265810 TSPAN16Q9UKR8 245 aa15.24■□□□□ 0.03
PDLIM2-201ENST00000265810 PCDHA2Q9Y5H9 948 aa15.24■□□□□ 0.03
PDLIM2-201ENST00000265810 EFHC1Q5JVL4 640 aa15.24■□□□□ 0.03
PDLIM2-201ENST00000265810 LBHD1Q9BQE6 289 aaPredicted RBP15.24■□□□□ 0.03
PDLIM2-201ENST00000265810 DDX43Q9NXZ2 648 aaKnown RBP15.24■□□□□ 0.03
PDLIM2-201ENST00000265810 RSPH14Q9UHP6 348 aa15.24■□□□□ 0.03
PDLIM2-201ENST00000265810 NFIL3Q16649 462 aa15.23■□□□□ 0.03
PDLIM2-201ENST00000265810 PDIK1LQ8N165 341 aa15.23■□□□□ 0.03
PDLIM2-201ENST00000265810 EMC1Q8N766 993 aa15.23■□□□□ 0.03
PDLIM2-201ENST00000265810 NOA1Q8NC60 698 aaKnown RBP15.23■□□□□ 0.03
PDLIM2-201ENST00000265810 CRYGNQ8WXF5 182 aa15.23■□□□□ 0.03
PDLIM2-201ENST00000265810 SEMA4DQ92854 862 aa15.23■□□□□ 0.03
PDLIM2-201ENST00000265810 LPPQ93052 612 aa15.23■□□□□ 0.03
PDLIM2-201ENST00000265810 FAF2Q96CS3 445 aa15.23■□□□□ 0.03
PDLIM2-201ENST00000265810 DDX27Q96GQ7 796 aaKnown RBP15.23■□□□□ 0.03
PDLIM2-201ENST00000265810 NXF3Q9H4D5 531 aaKnown RBP15.23■□□□□ 0.03
PDLIM2-201ENST00000265810 SMYD3Q9H7B4 428 aa15.23■□□□□ 0.03
PDLIM2-201ENST00000265810 RAG1P15918 1043 aa15.23■□□□□ 0.03
PDLIM2-201ENST00000265810 PRKCIP41743 596 aa15.23■□□□□ 0.03
PDLIM2-201ENST00000265810 SLMAPQ14BN4 828 aa15.23■□□□□ 0.03
PDLIM2-201ENST00000265810 MTIF3Q9H2K0 278 aaKnown RBP15.23■□□□□ 0.03
PDLIM2-201ENST00000265810 UBN1Q9NPG3 1134 aa15.23■□□□□ 0.03
PDLIM2-201ENST00000265810 LY75O60449 1722 aa15.23■□□□□ 0.03
PDLIM2-201ENST00000265810 C22orf31O95567 290 aa15.23■□□□□ 0.03
PDLIM2-201ENST00000265810 SNAI1O95863 264 aaPredicted RBP15.23■□□□□ 0.03
PDLIM2-201ENST00000265810 SRGAP2BP0DMP2 458 aa15.23■□□□□ 0.03
PDLIM2-201ENST00000265810 SLCO1A2P46721 670 aa15.23■□□□□ 0.03
PDLIM2-201ENST00000265810 DEUP1Q05D60 604 aa15.23■□□□□ 0.03
PDLIM2-201ENST00000265810 PCBP1Q15365 356 aaKnown RBP eCLIP15.23■□□□□ 0.03
PDLIM2-201ENST00000265810 MDH1BQ5I0G3 518 aa15.23■□□□□ 0.03
PDLIM2-201ENST00000265810 ILDR2Q71H61 639 aa15.23■□□□□ 0.03
PDLIM2-201ENST00000265810 MCOLN2Q8IZK6 566 aa15.23■□□□□ 0.03
PDLIM2-201ENST00000265810 SLC7A14Q8TBB6 771 aa15.23■□□□□ 0.03
PDLIM2-201ENST00000265810 TRIM62Q9BVG3 475 aa15.23■□□□□ 0.03
PDLIM2-201ENST00000265810 KLHL8Q9P2G9 620 aaPredicted RBP15.23■□□□□ 0.03
PDLIM2-201ENST00000265810 GOLGA8MH3BSY2 632 aa15.22■□□□□ 0.03
PDLIM2-201ENST00000265810 ALDH2P05091 517 aa15.22■□□□□ 0.03
PDLIM2-201ENST00000265810 RALAP11233 206 aa15.22■□□□□ 0.03
PDLIM2-201ENST00000265810 NCAM1P13591 858 aa15.22■□□□□ 0.03
PDLIM2-201ENST00000265810 LHX1P48742 406 aa15.22■□□□□ 0.03
PDLIM2-201ENST00000265810 MAPRE1Q15691 268 aaKnown RBP15.22■□□□□ 0.03
PDLIM2-201ENST00000265810 CCDC13Q8IYE1 715 aa15.22■□□□□ 0.03
PDLIM2-201ENST00000265810 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.22■□□□□ 0.03
PDLIM2-201ENST00000265810 FBXL5Q9UKA1 691 aa15.22■□□□□ 0.03
PDLIM2-201ENST00000265810 H3BRJ5 948 aa15.22■□□□□ 0.03
PDLIM2-201ENST00000265810 TTI1O43156 1089 aa15.22■□□□□ 0.03
PDLIM2-201ENST00000265810 HOXA2O43364 376 aa15.22■□□□□ 0.03
PDLIM2-201ENST00000265810 ACSL3O95573 720 aa15.22■□□□□ 0.03
PDLIM2-201ENST00000265810 LSM8O95777 96 aaKnown RBP15.22■□□□□ 0.03
PDLIM2-201ENST00000265810 APOEP02649 317 aa15.22■□□□□ 0.03
PDLIM2-201ENST00000265810 BCAT1P54687 386 aa15.22■□□□□ 0.03
PDLIM2-201ENST00000265810 VSNL1P62760 191 aa15.22■□□□□ 0.03
PDLIM2-201ENST00000265810 TSHZ1Q6ZSZ6 1077 aa15.22■□□□□ 0.03
PDLIM2-201ENST00000265810 SHC3Q92529 594 aa15.22■□□□□ 0.03
PDLIM2-201ENST00000265810 MED4Q9NPJ6 270 aa15.22■□□□□ 0.03
PDLIM2-201ENST00000265810 CPP00450 1065 aa15.22■□□□□ 0.03
PDLIM2-201ENST00000265810 KRT14P02533 472 aa15.22■□□□□ 0.03
PDLIM2-201ENST00000265810 ADSSP30520 456 aa15.22■□□□□ 0.03
PDLIM2-201ENST00000265810 GPS1Q13098 491 aa15.22■□□□□ 0.03
PDLIM2-201ENST00000265810 HHATQ5VTY9 493 aa15.22■□□□□ 0.03
PDLIM2-201ENST00000265810 ELMOD1Q8N336 334 aa15.22■□□□□ 0.03
PDLIM2-201ENST00000265810 CARD9Q9H257 536 aa15.22■□□□□ 0.03
PDLIM2-201ENST00000265810 TAS2R14Q9NYV8 317 aa15.22■□□□□ 0.03
PDLIM2-201ENST00000265810 F5H423 210 aaPredicted RBP15.22■□□□□ 0.03
PDLIM2-201ENST00000265810 GPR25O00155 361 aa15.22■□□□□ 0.03
PDLIM2-201ENST00000265810 ATP8B1O43520 1251 aa15.22■□□□□ 0.03
PDLIM2-201ENST00000265810 KCNJ1P48048 391 aa15.22■□□□□ 0.03
PDLIM2-201ENST00000265810 CCL23P55773 120 aa15.22■□□□□ 0.03
PDLIM2-201ENST00000265810 FAM71AQ8IYT1 594 aa15.22■□□□□ 0.03
PDLIM2-201ENST00000265810 USP38Q8NB14 1042 aa15.22■□□□□ 0.03
PDLIM2-201ENST00000265810 ZSWIM1Q9BR11 485 aa15.22■□□□□ 0.03
PDLIM2-201ENST00000265810 TSPYL2Q9H2G4 693 aaPredicted RBP15.22■□□□□ 0.03
PDLIM2-201ENST00000265810 PLEKHA5Q9HAU0 1116 aa15.22■□□□□ 0.03
PDLIM2-201ENST00000265810 FAN1Q9Y2M0 1017 aa15.22■□□□□ 0.03
PDLIM2-201ENST00000265810 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.22■□□□□ 0.03
PDLIM2-201ENST00000265810 TBKBP1A7MCY6 615 aa15.21■□□□□ 0.03
PDLIM2-201ENST00000265810 GOLGA8KD6RF30 607 aa15.21■□□□□ 0.03
PDLIM2-201ENST00000265810 GRM5P41594 1212 aa15.21■□□□□ 0.03
PDLIM2-201ENST00000265810 ARHGAP25P42331 645 aa15.21■□□□□ 0.03
PDLIM2-201ENST00000265810 PPM1FP49593 454 aaPredicted RBP15.21■□□□□ 0.03
PDLIM2-201ENST00000265810 MAP3K7CLP57077 242 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms