RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 TADA2BQ86TJ2 420 aa11.8□□□□□ -0.52
MSH3-201ENST00000265081 EXOC3L1Q86VI1 746 aa11.8□□□□□ -0.52
MSH3-201ENST00000265081 XYLT1Q86Y38 959 aa11.8□□□□□ -0.52
MSH3-201ENST00000265081 LRRC71Q8N4P6 559 aa11.8□□□□□ -0.52
MSH3-201ENST00000265081 OPTNQ96CV9 577 aa11.8□□□□□ -0.52
MSH3-201ENST00000265081 FETUBQ9UGM5 382 aa11.8□□□□□ -0.52
MSH3-201ENST00000265081 FAM170AA1A519 330 aa11.8□□□□□ -0.52
MSH3-201ENST00000265081 GPR25O00155 361 aa11.8□□□□□ -0.52
MSH3-201ENST00000265081 DNALI1O14645 258 aaPredicted RBP11.8□□□□□ -0.52
MSH3-201ENST00000265081 NDC80O14777 642 aa11.8□□□□□ -0.52
MSH3-201ENST00000265081 TNFAIP2Q03169 654 aa11.8□□□□□ -0.52
MSH3-201ENST00000265081 LAMC2Q13753 1193 aa11.8□□□□□ -0.52
MSH3-201ENST00000265081 CNGA2Q16280 664 aa11.8□□□□□ -0.52
MSH3-201ENST00000265081 ZNF699Q32M78 642 aa11.8□□□□□ -0.52
MSH3-201ENST00000265081 PTPN20Q4JDL3 420 aa11.8□□□□□ -0.52
MSH3-201ENST00000265081 TFDP3Q5H9I0 405 aa11.8□□□□□ -0.52
MSH3-201ENST00000265081 VSTM1Q6UX27 236 aa11.8□□□□□ -0.52
MSH3-201ENST00000265081 AFG1LQ8WV93 481 aa11.8□□□□□ -0.52
MSH3-201ENST00000265081 PPM1EQ8WY54 764 aa11.8□□□□□ -0.52
MSH3-201ENST00000265081 P3H4Q92791 437 aa11.8□□□□□ -0.52
MSH3-201ENST00000265081 ANKRD36BP1Q96IX9 119 aa11.8□□□□□ -0.52
MSH3-201ENST00000265081 DDX23Q9BUQ8 820 aaKnown RBP11.8□□□□□ -0.52
MSH3-201ENST00000265081 RNPEPQ9H4A4 650 aa11.8□□□□□ -0.52
MSH3-201ENST00000265081 IVNS1ABPQ9Y6Y0 642 aa11.8□□□□□ -0.52
MSH3-201ENST00000265081 HPDP32754 393 aaPredicted RBP11.79□□□□□ -0.52
MSH3-201ENST00000265081 ZNF268Q14587 947 aaPredicted RBP11.79□□□□□ -0.52
MSH3-201ENST00000265081 PPP1R7Q15435 360 aa11.79□□□□□ -0.52
MSH3-201ENST00000265081 WDR72Q3MJ13 1102 aa11.79□□□□□ -0.52
MSH3-201ENST00000265081 ZC3H12AQ5D1E8 599 aaKnown RBP11.79□□□□□ -0.52
MSH3-201ENST00000265081 EFCAB12Q6NXP0 572 aa11.79□□□□□ -0.52
MSH3-201ENST00000265081 DENND1BQ6P3S1 775 aa11.79□□□□□ -0.52
MSH3-201ENST00000265081 VSIG1Q86XK7 387 aa11.79□□□□□ -0.52
MSH3-201ENST00000265081 DHX37Q8IY37 1157 aaKnown RBP11.79□□□□□ -0.52
MSH3-201ENST00000265081 RIBC1Q8N443 379 aaPredicted RBP11.79□□□□□ -0.52
MSH3-201ENST00000265081 WDR35Q9P2L0 1181 aa11.79□□□□□ -0.52
MSH3-201ENST00000265081 C2CD2Q9Y426 696 aa11.79□□□□□ -0.52
MSH3-201ENST00000265081 MAGEB2O15479 319 aa11.79□□□□□ -0.52
MSH3-201ENST00000265081 ATF2P15336 505 aa11.79□□□□□ -0.52
MSH3-201ENST00000265081 CHN1P15882 459 aa11.79□□□□□ -0.52
MSH3-201ENST00000265081 MARCH8Q5T0T0 291 aa11.79□□□□□ -0.52
MSH3-201ENST00000265081 ZBTB33Q86T24 672 aa11.79□□□□□ -0.52
MSH3-201ENST00000265081 TAX1BP1Q86VP1 789 aa11.79□□□□□ -0.52
MSH3-201ENST00000265081 TMEM192Q8IY95 271 aa11.79□□□□□ -0.52
MSH3-201ENST00000265081 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.79□□□□□ -0.52
MSH3-201ENST00000265081 DERAQ9Y315 318 aa11.79□□□□□ -0.52
MSH3-201ENST00000265081 RASGRF2O14827 1237 aa11.79□□□□□ -0.52
MSH3-201ENST00000265081 MED7O43513 233 aa11.79□□□□□ -0.52
MSH3-201ENST00000265081 TJP3O95049 919 aa11.79□□□□□ -0.52
MSH3-201ENST00000265081 LGALS2P05162 132 aa11.79□□□□□ -0.52
MSH3-201ENST00000265081 RPL34P49207 117 aaKnown RBP11.79□□□□□ -0.52
MSH3-201ENST00000265081 VCPP55072 806 aaKnown RBP11.79□□□□□ -0.52
MSH3-201ENST00000265081 IFFO1Q0D2I5 559 aa11.79□□□□□ -0.52
MSH3-201ENST00000265081 KCTD2Q14681 263 aa11.79□□□□□ -0.52
MSH3-201ENST00000265081 PKDCCQ504Y2 493 aa11.79□□□□□ -0.52
MSH3-201ENST00000265081 RNASEH2BQ5TBB1 312 aaKnown RBP11.79□□□□□ -0.52
MSH3-201ENST00000265081 MFSD7Q6UXD7 560 aa11.79□□□□□ -0.52
MSH3-201ENST00000265081 MICALCLQ6ZW33 695 aa11.79□□□□□ -0.52
MSH3-201ENST00000265081 ARMCX2Q7L311 632 aa11.79□□□□□ -0.52
MSH3-201ENST00000265081 RHPN2Q8IUC4 686 aa11.79□□□□□ -0.52
MSH3-201ENST00000265081 KIAA0319LQ8IZA0 1049 aa11.79□□□□□ -0.52
MSH3-201ENST00000265081 CHMP6Q96FZ7 201 aa11.79□□□□□ -0.52
MSH3-201ENST00000265081 MCEEQ96PE7 176 aa11.79□□□□□ -0.52
MSH3-201ENST00000265081 F8VP50 259 aa11.78□□□□□ -0.52
MSH3-201ENST00000265081 TNNC2P02585 160 aa11.78□□□□□ -0.52
MSH3-201ENST00000265081 PRKG1Q13976 671 aa11.78□□□□□ -0.52
MSH3-201ENST00000265081 TXNRD3NBQ6F5E7 133 aa11.78□□□□□ -0.52
MSH3-201ENST00000265081 COPS5Q92905 334 aa11.78□□□□□ -0.52
MSH3-201ENST00000265081 PDGFCQ9NRA1 345 aa11.78□□□□□ -0.52
MSH3-201ENST00000265081 ZMYND8Q9ULU4 1186 aaPredicted RBP11.78□□□□□ -0.52
MSH3-201ENST00000265081 E7EVH7 732 aa11.78□□□□□ -0.52
MSH3-201ENST00000265081 RGS16O15492 202 aaPredicted RBP11.78□□□□□ -0.52
MSH3-201ENST00000265081 GJB6O95452 261 aa11.78□□□□□ -0.52
MSH3-201ENST00000265081 NFICP08651 508 aa11.78□□□□□ -0.52
MSH3-201ENST00000265081 SRGAP2CP0DJJ0 459 aa11.78□□□□□ -0.52
MSH3-201ENST00000265081 ITIH4Q14624 930 aa11.78□□□□□ -0.52
MSH3-201ENST00000265081 MORF4L2Q15014 288 aa11.78□□□□□ -0.52
MSH3-201ENST00000265081 DNAJC24Q6P3W2 148 aa11.78□□□□□ -0.52
MSH3-201ENST00000265081 CNPY4Q8N129 248 aa11.78□□□□□ -0.52
MSH3-201ENST00000265081 CMASQ8NFW8 434 aaPredicted RBP11.78□□□□□ -0.52
MSH3-201ENST00000265081 MS4A4AQ96JQ5 239 aa11.78□□□□□ -0.52
MSH3-201ENST00000265081 GTF2IRD1Q9UHL9 959 aa11.78□□□□□ -0.52
MSH3-201ENST00000265081 ITGA11Q9UKX5 1188 aa11.78□□□□□ -0.52
MSH3-201ENST00000265081 POLIQ9UNA4 740 aa11.78□□□□□ -0.52
MSH3-201ENST00000265081 LACTBL1A8MY62 500 aa11.78□□□□□ -0.52
MSH3-201ENST00000265081 LRCH4O75427 683 aa11.78□□□□□ -0.52
MSH3-201ENST00000265081 HMGCRP04035 888 aa11.78□□□□□ -0.52
MSH3-201ENST00000265081 TXNP10599 105 aaKnown RBP11.78□□□□□ -0.52
MSH3-201ENST00000265081 GHRP10912 638 aa11.78□□□□□ -0.52
MSH3-201ENST00000265081 PHKA2P46019 1235 aa11.78□□□□□ -0.52
MSH3-201ENST00000265081 ILDR2Q71H61 639 aa11.78□□□□□ -0.52
MSH3-201ENST00000265081 LIMS2Q7Z4I7 341 aa11.78□□□□□ -0.52
MSH3-201ENST00000265081 ELOVL4Q9GZR5 314 aa11.78□□□□□ -0.52
MSH3-201ENST00000265081 PCDH9Q9HC56 1237 aa11.78□□□□□ -0.52
MSH3-201ENST00000265081 PPP1R1BQ9UD71 204 aaPredicted RBP11.78□□□□□ -0.52
MSH3-201ENST00000265081 DNPEPQ9ULA0 475 aa11.78□□□□□ -0.52
MSH3-201ENST00000265081 TRPM7Q96QT4 1865 aa11.77□□□□□ -0.52
MSH3-201ENST00000265081 ZNF487B1APH4 448 aa11.77□□□□□ -0.52
MSH3-201ENST00000265081 E7ESA3 106 aa11.77□□□□□ -0.52
MSH3-201ENST00000265081 CXCL8P10145 99 aa11.77□□□□□ -0.52
MSH3-201ENST00000265081 CD58P19256 250 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms