RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 INHAP05111 366 aa9.85□□□□□ -0.83
SSR3-201ENST00000265044 PDGFRAP16234 1089 aa9.85□□□□□ -0.83
SSR3-201ENST00000265044 CHRNB2P17787 502 aa9.85□□□□□ -0.83
SSR3-201ENST00000265044 SCNN1GP51170 649 aa9.85□□□□□ -0.83
SSR3-201ENST00000265044 AMPD2Q01433 879 aa9.85□□□□□ -0.83
SSR3-201ENST00000265044 PPARDQ03181 441 aa9.85□□□□□ -0.83
SSR3-201ENST00000265044 DNAJC21Q5F1R6 531 aaKnown RBP9.85□□□□□ -0.83
SSR3-201ENST00000265044 PPP6R3Q5H9R7 873 aaPredicted RBP9.85□□□□□ -0.83
SSR3-201ENST00000265044 C12orf29Q8N999 325 aa9.85□□□□□ -0.83
SSR3-201ENST00000265044 SH3TC2Q8TF17 1288 aa9.85□□□□□ -0.83
SSR3-201ENST00000265044 PNKPQ96T60 521 aa9.85□□□□□ -0.83
SSR3-201ENST00000265044 NFKBIZQ9BYH8 718 aa9.85□□□□□ -0.83
SSR3-201ENST00000265044 CARD9Q9H257 536 aa9.85□□□□□ -0.83
SSR3-201ENST00000265044 RNF39Q9H2S5 420 aa9.85□□□□□ -0.83
SSR3-201ENST00000265044 FAM105AQ9NUU6 356 aa9.85□□□□□ -0.83
SSR3-201ENST00000265044 OGFRQ9NZT2 677 aa9.85□□□□□ -0.83
SSR3-201ENST00000265044 DDX20Q9UHI6 824 aaKnown RBP9.85□□□□□ -0.83
SSR3-201ENST00000265044 GTF2IRD1Q9UHL9 959 aa9.85□□□□□ -0.83
SSR3-201ENST00000265044 PAPPA2Q9BXP8 1791 aa9.85□□□□□ -0.83
SSR3-201ENST00000265044 KIF3CO14782 793 aa9.85□□□□□ -0.83
SSR3-201ENST00000265044 HSPA6P17066 643 aa9.85□□□□□ -0.83
SSR3-201ENST00000265044 SDC4P31431 198 aa9.85□□□□□ -0.83
SSR3-201ENST00000265044 SLC1A1P43005 524 aa9.85□□□□□ -0.83
SSR3-201ENST00000265044 PCBP1Q15365 356 aaKnown RBP eCLIP9.85□□□□□ -0.83
SSR3-201ENST00000265044 TAF12Q16514 161 aa9.85□□□□□ -0.83
SSR3-201ENST00000265044 SMTNL2Q2TAL5 461 aa9.85□□□□□ -0.83
SSR3-201ENST00000265044 MARCH8Q5T0T0 291 aa9.85□□□□□ -0.83
SSR3-201ENST00000265044 DAB2IPQ5VWQ8 1189 aa9.85□□□□□ -0.83
SSR3-201ENST00000265044 RFX6Q8HWS3 928 aa9.85□□□□□ -0.83
SSR3-201ENST00000265044 REM2Q8IYK8 340 aaPredicted RBP9.85□□□□□ -0.83
SSR3-201ENST00000265044 TMEM130Q8N3G9 435 aa9.85□□□□□ -0.83
SSR3-201ENST00000265044 KRT35Q92764 455 aa9.85□□□□□ -0.83
SSR3-201ENST00000265044 FAM118BQ9BPY3 351 aa9.85□□□□□ -0.83
SSR3-201ENST00000265044 ZSWIM1Q9BR11 485 aa9.85□□□□□ -0.83
SSR3-201ENST00000265044 GPR88Q9GZN0 384 aa9.85□□□□□ -0.83
SSR3-201ENST00000265044 KATNBL1Q9H079 304 aa9.85□□□□□ -0.83
SSR3-201ENST00000265044 METTL5Q9NRN9 209 aaKnown RBP9.85□□□□□ -0.83
SSR3-201ENST00000265044 DMGDHQ9UI17 866 aaKnown RBP9.85□□□□□ -0.83
SSR3-201ENST00000265044 PADI3Q9ULW8 664 aa9.85□□□□□ -0.83
SSR3-201ENST00000265044 ADGRA2Q96PE1 1338 aa9.85□□□□□ -0.83
SSR3-201ENST00000265044 GOLGA6BA6NDN3 693 aa9.85□□□□□ -0.83
SSR3-201ENST00000265044 OR1G1P47890 313 aa9.85□□□□□ -0.83
SSR3-201ENST00000265044 FAM187BQ17R55 369 aa9.85□□□□□ -0.83
SSR3-201ENST00000265044 KCTD19Q17RG1 926 aaPredicted RBP9.85□□□□□ -0.83
SSR3-201ENST00000265044 DENND1BQ6P3S1 775 aa9.85□□□□□ -0.83
SSR3-201ENST00000265044 ADGRF2Q8IZF7 708 aa9.85□□□□□ -0.83
SSR3-201ENST00000265044 URGCPQ8TCY9 931 aa9.85□□□□□ -0.83
SSR3-201ENST00000265044 ANKRD7Q92527 254 aa9.85□□□□□ -0.83
SSR3-201ENST00000265044 DEFB118Q96PH6 123 aa9.85□□□□□ -0.83
SSR3-201ENST00000265044 ASNSD1Q9NWL6 643 aa9.85□□□□□ -0.83
SSR3-201ENST00000265044 VPS18Q9P253 973 aa9.85□□□□□ -0.83
SSR3-201ENST00000265044 SNX24Q9Y343 169 aa9.85□□□□□ -0.83
SSR3-201ENST00000265044 CSPG5O95196 566 aa9.84□□□□□ -0.83
SSR3-201ENST00000265044 KCNJ1P48048 391 aa9.84□□□□□ -0.83
SSR3-201ENST00000265044 GJA9P57773 515 aa9.84□□□□□ -0.83
SSR3-201ENST00000265044 NOMO3P69849 1222 aa9.84□□□□□ -0.83
SSR3-201ENST00000265044 STILQ15468 1287 aa9.84□□□□□ -0.83
SSR3-201ENST00000265044 RSRC2Q7L4I2 434 aaKnown RBP9.84□□□□□ -0.83
SSR3-201ENST00000265044 MAP7D3Q8IWC1 876 aa9.84□□□□□ -0.83
SSR3-201ENST00000265044 SCN4BQ8IWT1 228 aa9.84□□□□□ -0.83
SSR3-201ENST00000265044 TMEM40Q8WWA1 233 aa9.84□□□□□ -0.83
SSR3-201ENST00000265044 TRIM7Q9C029 511 aa9.84□□□□□ -0.83
SSR3-201ENST00000265044 WDR35Q9P2L0 1181 aa9.84□□□□□ -0.83
SSR3-201ENST00000265044 TTI1O43156 1089 aa9.84□□□□□ -0.83
SSR3-201ENST00000265044 CABYRO75952 493 aa9.84□□□□□ -0.83
SSR3-201ENST00000265044 ECEL1O95672 775 aa9.84□□□□□ -0.83
SSR3-201ENST00000265044 GLE1Q53GS7 698 aaKnown RBP9.84□□□□□ -0.83
SSR3-201ENST00000265044 FAM117BQ6P1L5 589 aa9.84□□□□□ -0.83
SSR3-201ENST00000265044 CCDC137Q6PK04 289 aaKnown RBP9.84□□□□□ -0.83
SSR3-201ENST00000265044 HOOK3Q86VS8 718 aa9.84□□□□□ -0.83
SSR3-201ENST00000265044 THEM5Q8N1Q8 247 aa9.84□□□□□ -0.83
SSR3-201ENST00000265044 CCDC89Q8N998 374 aa9.84□□□□□ -0.83
SSR3-201ENST00000265044 UHMK1Q8TAS1 419 aaKnown RBP9.84□□□□□ -0.83
SSR3-201ENST00000265044 PPP1R12CQ9BZL4 782 aa9.84□□□□□ -0.83
SSR3-201ENST00000265044 ZNF518BQ9C0D4 1074 aa9.84□□□□□ -0.83
SSR3-201ENST00000265044 SENP6Q9GZR1 1112 aaPredicted RBP9.84□□□□□ -0.83
SSR3-201ENST00000265044 TSPYL2Q9H2G4 693 aaPredicted RBP9.84□□□□□ -0.83
SSR3-201ENST00000265044 RSAD1Q9HA92 442 aa9.84□□□□□ -0.83
SSR3-201ENST00000265044 PRDM10Q9NQV6 1147 aa9.84□□□□□ -0.83
SSR3-201ENST00000265044 COG5Q9UP83 839 aa9.84□□□□□ -0.83
SSR3-201ENST00000265044 PASKQ96RG2 1323 aa9.84□□□□□ -0.83
SSR3-201ENST00000265044 RAD51CO43502 376 aa9.84□□□□□ -0.83
SSR3-201ENST00000265044 MICAL2O94851 1124 aa9.84□□□□□ -0.83
SSR3-201ENST00000265044 LSM8O95777 96 aaKnown RBP9.84□□□□□ -0.83
SSR3-201ENST00000265044 RPLP2P05387 115 aaKnown RBP9.84□□□□□ -0.83
SSR3-201ENST00000265044 CFHP08603 1231 aa9.84□□□□□ -0.83
SSR3-201ENST00000265044 LMAN1P49257 510 aa9.84□□□□□ -0.83
SSR3-201ENST00000265044 ACLYP53396 1101 aa9.84□□□□□ -0.83
SSR3-201ENST00000265044 EPHB4P54760 987 aa9.84□□□□□ -0.83
SSR3-201ENST00000265044 C1QBPQ07021 282 aaKnown RBP9.84□□□□□ -0.83
SSR3-201ENST00000265044 CASP8Q14790 479 aa9.84□□□□□ -0.83
SSR3-201ENST00000265044 KCNT1Q5JUK3 1230 aa9.84□□□□□ -0.83
SSR3-201ENST00000265044 AADACL2Q6P093 401 aa9.84□□□□□ -0.83
SSR3-201ENST00000265044 RSAD2Q8WXG1 361 aa9.84□□□□□ -0.83
SSR3-201ENST00000265044 LRRC45Q96CN5 670 aa9.84□□□□□ -0.83
SSR3-201ENST00000265044 PRDM5Q9NQX1 630 aaPredicted RBP9.84□□□□□ -0.83
SSR3-201ENST00000265044 CYBAP13498 195 aa9.83□□□□□ -0.84
SSR3-201ENST00000265044 VEGFBP49765 207 aa9.83□□□□□ -0.84
SSR3-201ENST00000265044 RPL7AP62424 266 aaKnown RBP9.83□□□□□ -0.84
SSR3-201ENST00000265044 TAP1Q03518 808 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms