RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 CREG2Q8IUH2 290 aa17.52■□□□□ 0.4
PHRF1-201ENST00000264555 PARD3BQ8TEW8 1205 aa17.52■□□□□ 0.4
PHRF1-201ENST00000264555 ABCC6O95255 1503 aa17.52■□□□□ 0.4
PHRF1-201ENST00000264555 C3orf70A6NLC5 250 aaPredicted RBP17.52■□□□□ 0.39
PHRF1-201ENST00000264555 GRIN3BO60391 1043 aa17.52■□□□□ 0.39
PHRF1-201ENST00000264555 PRKCIP41743 596 aa17.52■□□□□ 0.39
PHRF1-201ENST00000264555 MYL6P60660 151 aa17.52■□□□□ 0.39
PHRF1-201ENST00000264555 RASIP1Q5U651 963 aa17.52■□□□□ 0.39
PHRF1-201ENST00000264555 TATDN1Q6P1N9 297 aa17.52■□□□□ 0.39
PHRF1-201ENST00000264555 ARL8AQ96BM9 186 aa17.52■□□□□ 0.39
PHRF1-201ENST00000264555 CLMNQ96JQ2 1002 aa17.52■□□□□ 0.39
PHRF1-201ENST00000264555 ADAM33Q9BZ11 813 aa17.52■□□□□ 0.39
PHRF1-201ENST00000264555 ALG13Q9NP73 1137 aaKnown RBP17.52■□□□□ 0.39
PHRF1-201ENST00000264555 HSPA8P11142 646 aaKnown RBP17.52■□□□□ 0.39
PHRF1-201ENST00000264555 PTK7Q13308 1070 aa17.52■□□□□ 0.39
PHRF1-201ENST00000264555 WDR59Q6PJI9 974 aa17.52■□□□□ 0.39
PHRF1-201ENST00000264555 NDUFAF2Q8N183 169 aa17.52■□□□□ 0.39
PHRF1-201ENST00000264555 CCNYL1Q8N7R7 359 aa17.52■□□□□ 0.39
PHRF1-201ENST00000264555 H3BQF6 201 aa17.51■□□□□ 0.39
PHRF1-201ENST00000264555 DIAPH2O60879 1101 aa17.51■□□□□ 0.39
PHRF1-201ENST00000264555 ZNF157P51786 506 aaPredicted RBP17.51■□□□□ 0.39
PHRF1-201ENST00000264555 C1QBPQ07021 282 aaKnown RBP17.51■□□□□ 0.39
PHRF1-201ENST00000264555 CBWD6Q4V339 395 aa17.51■□□□□ 0.39
PHRF1-201ENST00000264555 CBWD3Q5JTY5 395 aa17.51■□□□□ 0.39
PHRF1-201ENST00000264555 CBWD5Q5RIA9 395 aa17.51■□□□□ 0.39
PHRF1-201ENST00000264555 ZNF662Q6ZS27 426 aa17.51■□□□□ 0.39
PHRF1-201ENST00000264555 KLC4Q9NSK0 619 aa17.51■□□□□ 0.39
PHRF1-201ENST00000264555 STOML1Q9UBI4 398 aa17.51■□□□□ 0.39
PHRF1-201ENST00000264555 HNRNPCL1O60812 293 aaKnown RBP17.51■□□□□ 0.39
PHRF1-201ENST00000264555 CPB1P15086 417 aa17.51■□□□□ 0.39
PHRF1-201ENST00000264555 KCNA1Q09470 495 aa17.51■□□□□ 0.39
PHRF1-201ENST00000264555 MCOLN2Q8IZK6 566 aa17.51■□□□□ 0.39
PHRF1-201ENST00000264555 ETNPPLQ8TBG4 499 aa17.51■□□□□ 0.39
PHRF1-201ENST00000264555 ACSF2Q96CM8 615 aaPredicted RBP17.51■□□□□ 0.39
PHRF1-201ENST00000264555 NALCNQ8IZF0 1738 aa17.51■□□□□ 0.39
PHRF1-201ENST00000264555 SNHG28P0DPA3 235 aa17.51■□□□□ 0.39
PHRF1-201ENST00000264555 ATICP31939 592 aa17.51■□□□□ 0.39
PHRF1-201ENST00000264555 GCLCP48506 637 aaPredicted RBP17.51■□□□□ 0.39
PHRF1-201ENST00000264555 PRAMEP78395 509 aa17.51■□□□□ 0.39
PHRF1-201ENST00000264555 DCAF6Q58WW2 860 aa17.51■□□□□ 0.39
PHRF1-201ENST00000264555 FBXO25Q8TCJ0 367 aa17.51■□□□□ 0.39
PHRF1-201ENST00000264555 ZFYVE28Q9HCC9 887 aa17.51■□□□□ 0.39
PHRF1-201ENST00000264555 PCDHGC5Q9Y5F6 944 aa17.51■□□□□ 0.39
PHRF1-201ENST00000264555 CASZ1Q86V15 1759 aa17.51■□□□□ 0.39
PHRF1-201ENST00000264555 CYP3A43Q9HB55 503 aa17.51■□□□□ 0.39
PHRF1-201ENST00000264555 GTSE1Q9NYZ3 720 aa17.51■□□□□ 0.39
PHRF1-201ENST00000264555 SCOCQ9UIL1 159 aa17.51■□□□□ 0.39
PHRF1-201ENST00000264555 FRMD3A2A2Y4 597 aa17.5■□□□□ 0.39
PHRF1-201ENST00000264555 GEMIN4P57678 1058 aaKnown RBP17.5■□□□□ 0.39
PHRF1-201ENST00000264555 CCNG2Q16589 344 aa17.5■□□□□ 0.39
PHRF1-201ENST00000264555 C3orf20Q8ND61 904 aa17.5■□□□□ 0.39
PHRF1-201ENST00000264555 WDR18Q9BV38 432 aa17.5■□□□□ 0.39
PHRF1-201ENST00000264555 TSSK1BQ9BXA7 367 aa17.5■□□□□ 0.39
PHRF1-201ENST00000264555 TMEM150BA6NC51 233 aa17.5■□□□□ 0.39
PHRF1-201ENST00000264555 H0Y3Z8 333 aa17.5■□□□□ 0.39
PHRF1-201ENST00000264555 CASP2P42575 452 aa17.5■□□□□ 0.39
PHRF1-201ENST00000264555 CTCFP49711 727 aaPredicted RBP17.5■□□□□ 0.39
PHRF1-201ENST00000264555 POU5F1BQ06416 359 aa17.5■□□□□ 0.39
PHRF1-201ENST00000264555 NT5DC3Q86UY8 548 aa17.5■□□□□ 0.39
PHRF1-201ENST00000264555 AGAP3Q96P47 875 aa17.5■□□□□ 0.39
PHRF1-201ENST00000264555 PCDHAC2Q9Y5I4 1007 aa17.5■□□□□ 0.39
PHRF1-201ENST00000264555 PARP4Q9UKK3 1724 aaKnown RBP17.5■□□□□ 0.39
PHRF1-201ENST00000264555 SNRPAP09012 282 aaKnown RBP17.5■□□□□ 0.39
PHRF1-201ENST00000264555 HYIQ5T013 277 aa17.5■□□□□ 0.39
PHRF1-201ENST00000264555 TRPV6Q9H1D0 765 aa17.5■□□□□ 0.39
PHRF1-201ENST00000264555 CXCL11O14625 94 aa17.5■□□□□ 0.39
PHRF1-201ENST00000264555 ZPBP2Q6X784 338 aa17.5■□□□□ 0.39
PHRF1-201ENST00000264555 SLC8A2Q9UPR5 921 aa17.5■□□□□ 0.39
PHRF1-201ENST00000264555 F8W8V4 182 aa17.49■□□□□ 0.39
PHRF1-201ENST00000264555 MYCP01106 439 aaPredicted RBP17.49■□□□□ 0.39
PHRF1-201ENST00000264555 PBX1P40424 430 aa17.49■□□□□ 0.39
PHRF1-201ENST00000264555 ALDH5A1P51649 535 aaPredicted RBP17.49■□□□□ 0.39
PHRF1-201ENST00000264555 SLC12A1Q13621 1099 aa17.49■□□□□ 0.39
PHRF1-201ENST00000264555 OR6P1Q8NGX9 317 aa17.49■□□□□ 0.39
PHRF1-201ENST00000264555 VCPIP1Q96JH7 1222 aa17.49■□□□□ 0.39
PHRF1-201ENST00000264555 AFDNP55196 1824 aaKnown RBP17.49■□□□□ 0.39
PHRF1-201ENST00000264555 KCNMA1Q12791 1236 aa17.49■□□□□ 0.39
PHRF1-201ENST00000264555 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.49■□□□□ 0.394e-6■■□□□ 11.4
PHRF1-201ENST00000264555 ASTN1O14525 1302 aa17.49■□□□□ 0.39
PHRF1-201ENST00000264555 HSP90AA5PQ58FG0 334 aa17.49■□□□□ 0.39
PHRF1-201ENST00000264555 C1orf146Q5VVC0 180 aa17.49■□□□□ 0.39
PHRF1-201ENST00000264555 TRPM8Q7Z2W7 1104 aa17.49■□□□□ 0.39
PHRF1-201ENST00000264555 PPHLN1Q8NEY8 458 aaKnown RBP17.49■□□□□ 0.39
PHRF1-201ENST00000264555 SLC7A14Q8TBB6 771 aa17.49■□□□□ 0.39
PHRF1-201ENST00000264555 SMAD1Q15797 465 aaKnown RBP17.49■□□□□ 0.39
PHRF1-201ENST00000264555 MDM1Q8TC05 714 aa17.49■□□□□ 0.39
PHRF1-201ENST00000264555 UPF3AQ9H1J1 476 aaKnown RBP17.49■□□□□ 0.39
PHRF1-201ENST00000264555 UBIAD1Q9Y5Z9 338 aa17.49■□□□□ 0.39
PHRF1-201ENST00000264555 NFKBIAP25963 317 aa17.49■□□□□ 0.39
PHRF1-201ENST00000264555 HNRNPH3P31942 346 aaKnown RBP17.49■□□□□ 0.39
PHRF1-201ENST00000264555 YWHAHQ04917 246 aaPredicted RBP17.49■□□□□ 0.39
PHRF1-201ENST00000264555 PDK2Q15119 407 aa17.49■□□□□ 0.39
PHRF1-201ENST00000264555 LY6KQ17RY6 165 aa17.49■□□□□ 0.39
PHRF1-201ENST00000264555 KIF19Q2TAC6 998 aa17.49■□□□□ 0.39
PHRF1-201ENST00000264555 VSIG10LQ86VR7 867 aa17.49■□□□□ 0.39
PHRF1-201ENST00000264555 ASAP3Q8TDY4 903 aa17.49■□□□□ 0.39
PHRF1-201ENST00000264555 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.49■□□□□ 0.391e-6■□□□□ 10.4
PHRF1-201ENST00000264555 TSTA3Q13630 321 aaPredicted RBP17.48■□□□□ 0.39
PHRF1-201ENST00000264555 SPOCD1Q6ZMY3 1216 aa17.48■□□□□ 0.39
PHRF1-201ENST00000264555 PLEKHH3Q7Z736 793 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms