RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 TBC1D25Q3MII6 688 aa13.02□□□□□ -0.32
CHMP2B-201ENST00000263780 SH2D4BQ5SQS7 431 aa13.02□□□□□ -0.32
CHMP2B-201ENST00000263780 CAPN12Q6ZSI9 719 aa13.02□□□□□ -0.32
CHMP2B-201ENST00000263780 SCUBE1Q8IWY4 988 aa13.02□□□□□ -0.32
CHMP2B-201ENST00000263780 PIP4K2CQ8TBX8 421 aa13.02□□□□□ -0.32
CHMP2B-201ENST00000263780 CPA5Q8WXQ8 436 aa13.02□□□□□ -0.32
CHMP2B-201ENST00000263780 RBM17Q96I25 401 aaKnown RBP13.02□□□□□ -0.32
CHMP2B-201ENST00000263780 FHDC1Q9C0D6 1143 aaPredicted RBP13.02□□□□□ -0.32
CHMP2B-201ENST00000263780 KCNK4Q9NYG8 393 aa13.02□□□□□ -0.32
CHMP2B-201ENST00000263780 WRAP73Q9P2S5 460 aaPredicted RBP13.02□□□□□ -0.32
CHMP2B-201ENST00000263780 GREB1LQ9C091 1923 aaPredicted RBP13.02□□□□□ -0.33
CHMP2B-201ENST00000263780 TISP43B9A030 160 aa13.02□□□□□ -0.33
CHMP2B-201ENST00000263780 KLF11O14901 512 aa13.02□□□□□ -0.33
CHMP2B-201ENST00000263780 GNPATO15228 680 aa13.02□□□□□ -0.33
CHMP2B-201ENST00000263780 KCNQ2O43526 872 aa13.02□□□□□ -0.33
CHMP2B-201ENST00000263780 LPXNO60711 386 aa13.02□□□□□ -0.33
CHMP2B-201ENST00000263780 P4HBP07237 508 aaKnown RBP13.02□□□□□ -0.33
CHMP2B-201ENST00000263780 ADRB2P07550 413 aa13.02□□□□□ -0.33
CHMP2B-201ENST00000263780 CD58P19256 250 aa13.02□□□□□ -0.33
CHMP2B-201ENST00000263780 VCPP55072 806 aaKnown RBP13.02□□□□□ -0.33
CHMP2B-201ENST00000263780 ZFYVE27Q5T4F4 411 aa13.02□□□□□ -0.33
CHMP2B-201ENST00000263780 LRRC38Q5VT99 294 aa13.02□□□□□ -0.33
CHMP2B-201ENST00000263780 CIAPIN1Q6FI81 312 aa13.02□□□□□ -0.33
CHMP2B-201ENST00000263780 AAGABQ6PD74 315 aa13.02□□□□□ -0.33
CHMP2B-201ENST00000263780 HHIPL2Q6UWX4 724 aa13.02□□□□□ -0.33
CHMP2B-201ENST00000263780 IZUMO2Q6UXV1 221 aa13.02□□□□□ -0.33
CHMP2B-201ENST00000263780 MON1BQ7L1V2 547 aa13.02□□□□□ -0.33
CHMP2B-201ENST00000263780 ADGRG6Q86SQ4 1221 aa13.02□□□□□ -0.33
CHMP2B-201ENST00000263780 NKD2Q969F2 451 aaPredicted RBP13.02□□□□□ -0.33
CHMP2B-201ENST00000263780 CCDC127Q96BQ5 260 aa13.02□□□□□ -0.33
CHMP2B-201ENST00000263780 PAFAH2Q99487 392 aa13.02□□□□□ -0.33
CHMP2B-201ENST00000263780 FRMD8P1Q9BZ68 369 aaPredicted RBP13.02□□□□□ -0.33
CHMP2B-201ENST00000263780 KCNK13Q9HB14 408 aa13.02□□□□□ -0.33
CHMP2B-201ENST00000263780 C1orf112Q9NSG2 853 aa13.02□□□□□ -0.33
CHMP2B-201ENST00000263780 MYPNQ86TC9 1320 aa13.02□□□□□ -0.33
CHMP2B-201ENST00000263780 ZNF335Q9H4Z2 1342 aaPredicted RBP13.02□□□□□ -0.33
CHMP2B-201ENST00000263780 MYH11P35749 1972 aa13.01□□□□□ -0.33
CHMP2B-201ENST00000263780 SPECC1L-ADORA2AF8WAN1 911 aa13.01□□□□□ -0.33
CHMP2B-201ENST00000263780 TM7SF2O76062 418 aa13.01□□□□□ -0.33
CHMP2B-201ENST00000263780 NDUFB10O96000 172 aa13.01□□□□□ -0.33
CHMP2B-201ENST00000263780 DHRS4L1P0CG22 281 aa13.01□□□□□ -0.33
CHMP2B-201ENST00000263780 PTPN7P35236 360 aa13.01□□□□□ -0.33
CHMP2B-201ENST00000263780 ECE1P42892 770 aa13.01□□□□□ -0.33
CHMP2B-201ENST00000263780 TAS2R40P59535 323 aa13.01□□□□□ -0.33
CHMP2B-201ENST00000263780 XIAPP98170 497 aa13.01□□□□□ -0.33
CHMP2B-201ENST00000263780 CDK18Q07002 472 aa13.01□□□□□ -0.33
CHMP2B-201ENST00000263780 TMCO4Q5TGY1 634 aa13.01□□□□□ -0.33
CHMP2B-201ENST00000263780 CDC42EP5Q6NZY7 148 aa13.01□□□□□ -0.33
CHMP2B-201ENST00000263780 B3GNT9Q6UX72 402 aa13.01□□□□□ -0.33
CHMP2B-201ENST00000263780 C3orf62Q6ZUJ4 267 aa13.01□□□□□ -0.33
CHMP2B-201ENST00000263780 MARK2Q7KZI7 788 aaKnown RBP13.01□□□□□ -0.33
CHMP2B-201ENST00000263780 LRRC6Q86X45 466 aa13.01□□□□□ -0.33
CHMP2B-201ENST00000263780 MYLK4Q86YV6 388 aaPredicted RBP13.01□□□□□ -0.33
CHMP2B-201ENST00000263780 PALM2Q8IXS6 379 aa13.01□□□□□ -0.33
CHMP2B-201ENST00000263780 PPIL6Q8IXY8 311 aa13.01□□□□□ -0.33
CHMP2B-201ENST00000263780 HAPLN3Q96S86 360 aa13.01□□□□□ -0.33
CHMP2B-201ENST00000263780 COA1Q9GZY4 146 aa13.01□□□□□ -0.33
CHMP2B-201ENST00000263780 IKBKGQ9Y6K9 419 aa13.01□□□□□ -0.33
CHMP2B-201ENST00000263780 NUMBLQ9Y6R0 609 aa13.01□□□□□ -0.33
CHMP2B-201ENST00000263780 GOLGA8IPA6NC78 632 aa13.01□□□□□ -0.33
CHMP2B-201ENST00000263780 GOLGA8JA6NMD2 632 aa13.01□□□□□ -0.33
CHMP2B-201ENST00000263780 I3L4J1 428 aa13.01□□□□□ -0.33
CHMP2B-201ENST00000263780 MYL2P10916 166 aa13.01□□□□□ -0.33
CHMP2B-201ENST00000263780 RANBP1P43487 201 aa13.01□□□□□ -0.33
CHMP2B-201ENST00000263780 GPX6P59796 221 aa13.01□□□□□ -0.33
CHMP2B-201ENST00000263780 ACTR3P61158 418 aa13.01□□□□□ -0.33
CHMP2B-201ENST00000263780 RPL26P61254 145 aaKnown RBP13.01□□□□□ -0.33
CHMP2B-201ENST00000263780 NOP14P78316 857 aaKnown RBP13.01□□□□□ -0.33
CHMP2B-201ENST00000263780 LSAMPQ13449 338 aa13.01□□□□□ -0.33
CHMP2B-201ENST00000263780 HP1BP3Q5SSJ5 553 aaPredicted RBP13.01□□□□□ -0.33
CHMP2B-201ENST00000263780 MIER3Q7Z3K6 550 aa13.01□□□□□ -0.33
CHMP2B-201ENST00000263780 LCA5Q86VQ0 697 aa13.01□□□□□ -0.33
CHMP2B-201ENST00000263780 CBWD2Q8IUF1 395 aa13.01□□□□□ -0.33
CHMP2B-201ENST00000263780 KBTBD2Q8IY47 623 aa13.01□□□□□ -0.33
CHMP2B-201ENST00000263780 TAS1R2Q8TE23 839 aa13.01□□□□□ -0.33
CHMP2B-201ENST00000263780 SLITRK1Q96PX8 696 aa13.01□□□□□ -0.33
CHMP2B-201ENST00000263780 FBXO6Q9NRD1 293 aaPredicted RBP13.01□□□□□ -0.33
CHMP2B-201ENST00000263780 PARVAQ9NVD7 372 aa13.01□□□□□ -0.33
CHMP2B-201ENST00000263780 CHCHD3Q9NX63 227 aaKnown RBP13.01□□□□□ -0.33
CHMP2B-201ENST00000263780 PI4KBQ9UBF8 816 aa13.01□□□□□ -0.33
CHMP2B-201ENST00000263780 USTQ9Y2C2 406 aa13.01□□□□□ -0.33
CHMP2B-201ENST00000263780 CFBP00751 764 aa13□□□□□ -0.33
CHMP2B-201ENST00000263780 ZSCAN5DPP0CG00 497 aa13□□□□□ -0.33
CHMP2B-201ENST00000263780 GJC1P36383 396 aa13□□□□□ -0.33
CHMP2B-201ENST00000263780 MAMLD1Q13495 774 aa13□□□□□ -0.33
CHMP2B-201ENST00000263780 HNRNPDQ14103 355 aaKnown RBP13□□□□□ -0.33
CHMP2B-201ENST00000263780 TFDP1Q14186 410 aa13□□□□□ -0.33
CHMP2B-201ENST00000263780 WDR44Q5JSH3 913 aa13□□□□□ -0.33
CHMP2B-201ENST00000263780 KAZNQ674X7 775 aa13□□□□□ -0.33
CHMP2B-201ENST00000263780 PLEKHA7Q6IQ23 1121 aa13□□□□□ -0.33
CHMP2B-201ENST00000263780 ACAD11Q709F0 780 aa13□□□□□ -0.33
CHMP2B-201ENST00000263780 APOPT1Q96IL0 206 aa13□□□□□ -0.33
CHMP2B-201ENST00000263780 MFSD14AQ96MC6 490 aa13□□□□□ -0.33
CHMP2B-201ENST00000263780 CYTH2Q99418 400 aa13□□□□□ -0.33
CHMP2B-201ENST00000263780 SENP7Q9BQF6 1050 aa13□□□□□ -0.33
CHMP2B-201ENST00000263780 DDX56Q9NY93 547 aaKnown RBP13□□□□□ -0.33
CHMP2B-201ENST00000263780 SLC17A7Q9P2U7 560 aa13□□□□□ -0.33
CHMP2B-201ENST00000263780 TAGLN3Q9UI15 199 aa13□□□□□ -0.33
CHMP2B-201ENST00000263780 SYNPO2Q9UMS6 1093 aa13□□□□□ -0.33
CHMP2B-201ENST00000263780 WASF2Q9Y6W5 498 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms