RNA–Protein interactions for RNA: ENST00000263309.7

CLNS1A-201, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-201ENST00000263309 ASB3Q9Y575 518 aa13.41□□□□□ -0.26
CLNS1A-201ENST00000263309 CCDC195A0A1B0GUA6 201 aa13.4□□□□□ -0.26
CLNS1A-201ENST00000263309 ZNF197O14709 1029 aa13.4□□□□□ -0.26
CLNS1A-201ENST00000263309 EFEMP2O95967 443 aa13.4□□□□□ -0.26
CLNS1A-201ENST00000263309 PDGFRBP09619 1106 aa13.4□□□□□ -0.26
CLNS1A-201ENST00000263309 CCDC172P0C7W6 258 aa13.4□□□□□ -0.26
CLNS1A-201ENST00000263309 RPL17P18621 184 aaKnown RBP13.4□□□□□ -0.26
CLNS1A-201ENST00000263309 HOXA9P31269 272 aa13.4□□□□□ -0.26
CLNS1A-201ENST00000263309 MCCD1P59942 119 aaPredicted RBP13.4□□□□□ -0.26
CLNS1A-201ENST00000263309 ROR1Q01973 937 aa13.4□□□□□ -0.26
CLNS1A-201ENST00000263309 CYP27A1Q02318 531 aa13.4□□□□□ -0.26
CLNS1A-201ENST00000263309 ADCY1Q08828 1119 aa13.4□□□□□ -0.26
CLNS1A-201ENST00000263309 SOWAHAQ2M3V2 549 aa13.4□□□□□ -0.26
CLNS1A-201ENST00000263309 MGAT5BQ3V5L5 792 aa13.4□□□□□ -0.26
CLNS1A-201ENST00000263309 TJAP1Q5JTD0 557 aa13.4□□□□□ -0.26
CLNS1A-201ENST00000263309 C15orf39Q6ZRI6 1047 aa13.4□□□□□ -0.26
CLNS1A-201ENST00000263309 ADGRD2Q7Z7M1 963 aa13.4□□□□□ -0.26
CLNS1A-201ENST00000263309 PPM1KQ8N3J5 372 aa13.4□□□□□ -0.26
CLNS1A-201ENST00000263309 AOPEPQ8N6M6 819 aa13.4□□□□□ -0.26
CLNS1A-201ENST00000263309 ACSF2Q96CM8 615 aaPredicted RBP13.4□□□□□ -0.26
CLNS1A-201ENST00000263309 FUBP3Q96I24 572 aaKnown RBP eCLIP13.4□□□□□ -0.26
CLNS1A-201ENST00000263309 GZF1Q9H116 711 aaPredicted RBP13.4□□□□□ -0.26
CLNS1A-201ENST00000263309 BARX2Q9UMQ3 279 aaPredicted RBP13.4□□□□□ -0.26
CLNS1A-201ENST00000263309 COQ4Q9Y3A0 265 aa13.4□□□□□ -0.26
CLNS1A-201ENST00000263309 NR2E1Q9Y466 385 aa13.4□□□□□ -0.26
CLNS1A-201ENST00000263309 BDP1A6H8Y1 2624 aa13.39□□□□□ -0.27
CLNS1A-201ENST00000263309 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.39□□□□□ -0.27
CLNS1A-201ENST00000263309 SPTLC1O15269 473 aa13.39□□□□□ -0.27
CLNS1A-201ENST00000263309 MED7O43513 233 aa13.39□□□□□ -0.27
CLNS1A-201ENST00000263309 ZMYND10O75800 440 aa13.39□□□□□ -0.27
CLNS1A-201ENST00000263309 ABLIM3O94929 683 aa13.39□□□□□ -0.27
CLNS1A-201ENST00000263309 C8AP07357 584 aa13.39□□□□□ -0.27
CLNS1A-201ENST00000263309 PTPN2P17706 415 aa13.39□□□□□ -0.27
CLNS1A-201ENST00000263309 RFX1P22670 979 aa13.39□□□□□ -0.27
CLNS1A-201ENST00000263309 GRIK1P39086 918 aa13.39□□□□□ -0.27
CLNS1A-201ENST00000263309 SNX16P57768 344 aa13.39□□□□□ -0.27
CLNS1A-201ENST00000263309 BPIFB4P59827 614 aa13.39□□□□□ -0.27
CLNS1A-201ENST00000263309 LEXMQ3ZCV2 418 aa13.39□□□□□ -0.27
CLNS1A-201ENST00000263309 TCEAL8Q8IYN2 117 aa13.39□□□□□ -0.27
CLNS1A-201ENST00000263309 CEP295NLQ96MC4 621 aa13.39□□□□□ -0.27
CLNS1A-201ENST00000263309 HEXIM2Q96MH2 286 aaKnown RBP13.39□□□□□ -0.27
CLNS1A-201ENST00000263309 SEPT5Q99719 369 aaPredicted RBP13.39□□□□□ -0.27
CLNS1A-201ENST00000263309 SYT15Q9BQS2 421 aa13.39□□□□□ -0.27
CLNS1A-201ENST00000263309 VN1R3Q9BXE9 311 aa13.39□□□□□ -0.27
CLNS1A-201ENST00000263309 ZCWPW1Q9H0M4 648 aa13.39□□□□□ -0.27
CLNS1A-201ENST00000263309 ADAM7Q9H2U9 754 aa13.39□□□□□ -0.27
CLNS1A-201ENST00000263309 ABCB6Q9NP58 842 aa13.39□□□□□ -0.27
CLNS1A-201ENST00000263309 GCNT4Q9P109 453 aa13.39□□□□□ -0.27
CLNS1A-201ENST00000263309 HESX1Q9UBX0 185 aa13.39□□□□□ -0.27
CLNS1A-201ENST00000263309 L1RE1Q9UN81 338 aa13.39□□□□□ -0.27
CLNS1A-201ENST00000263309 PTPRSQ13332 1948 aa13.39□□□□□ -0.27
CLNS1A-201ENST00000263309 PTPRJQ12913 1337 aa13.39□□□□□ -0.27
CLNS1A-201ENST00000263309 GBF1Q92538 1859 aa13.38□□□□□ -0.27
CLNS1A-201ENST00000263309 GABRDO14764 452 aa13.38□□□□□ -0.27
CLNS1A-201ENST00000263309 PPEF2O14830 753 aa13.38□□□□□ -0.27
CLNS1A-201ENST00000263309 TRIM66O15016 1216 aa13.38□□□□□ -0.27
CLNS1A-201ENST00000263309 CBFA2T2O43439 604 aa13.38□□□□□ -0.27
CLNS1A-201ENST00000263309 SPATA31D3P0C874 917 aa13.38□□□□□ -0.27
CLNS1A-201ENST00000263309 EPCAMP16422 314 aa13.38□□□□□ -0.27
CLNS1A-201ENST00000263309 PTPN1P18031 435 aaKnown RBP13.38□□□□□ -0.27
CLNS1A-201ENST00000263309 CD58P19256 250 aa13.38□□□□□ -0.27
CLNS1A-201ENST00000263309 WNT7BP56706 349 aa13.38□□□□□ -0.27
CLNS1A-201ENST00000263309 GCNT1Q02742 428 aa13.38□□□□□ -0.27
CLNS1A-201ENST00000263309 UBXN1Q04323 297 aa13.38□□□□□ -0.27
CLNS1A-201ENST00000263309 LRMPQ12912 555 aa13.38□□□□□ -0.27
CLNS1A-201ENST00000263309 SMAD4Q13485 552 aaKnown RBP13.38□□□□□ -0.27
CLNS1A-201ENST00000263309 STILQ15468 1287 aa13.38□□□□□ -0.27
CLNS1A-201ENST00000263309 HSP90AA4PQ58FG1 418 aa13.38□□□□□ -0.27
CLNS1A-201ENST00000263309 INTS6LQ5JSJ4 861 aaKnown RBP13.38□□□□□ -0.27
CLNS1A-201ENST00000263309 RARS2Q5T160 578 aaKnown RBP13.38□□□□□ -0.27
CLNS1A-201ENST00000263309 LRSAM1Q6UWE0 723 aa13.38□□□□□ -0.27
CLNS1A-201ENST00000263309 VSTM1Q6UX27 236 aa13.38□□□□□ -0.27
CLNS1A-201ENST00000263309 CD300LGQ6UXG3 332 aa13.38□□□□□ -0.27
CLNS1A-201ENST00000263309 SCARA5Q6ZMJ2 495 aa13.38□□□□□ -0.27
CLNS1A-201ENST00000263309 SPATA31D4Q6ZUB0 917 aa13.38□□□□□ -0.27
CLNS1A-201ENST00000263309 CMASQ8NFW8 434 aaPredicted RBP13.38□□□□□ -0.27
CLNS1A-201ENST00000263309 VN1R2Q8NFZ6 395 aa13.38□□□□□ -0.27
CLNS1A-201ENST00000263309 SLC7A14Q8TBB6 771 aa13.38□□□□□ -0.27
CLNS1A-201ENST00000263309 MYCBPAPQ8TBZ2 947 aa13.38□□□□□ -0.27
CLNS1A-201ENST00000263309 PLEKHO2Q8TD55 490 aa13.38□□□□□ -0.27
CLNS1A-201ENST00000263309 SLC22A17Q8WUG5 538 aa13.38□□□□□ -0.27
CLNS1A-201ENST00000263309 SMG7Q92540 1137 aaKnown RBP13.38□□□□□ -0.27
CLNS1A-201ENST00000263309 PRKD2Q9BZL6 878 aa13.38□□□□□ -0.27
CLNS1A-201ENST00000263309 ELOVL4Q9GZR5 314 aa13.38□□□□□ -0.27
CLNS1A-201ENST00000263309 VPS16Q9H269 839 aa13.38□□□□□ -0.27
CLNS1A-201ENST00000263309 UBE2TQ9NPD8 197 aaPredicted RBP13.38□□□□□ -0.27
CLNS1A-201ENST00000263309 SAMSN1Q9NSI8 373 aaKnown RBP13.38□□□□□ -0.27
CLNS1A-201ENST00000263309 ABI2Q9NYB9 513 aaPredicted RBP13.38□□□□□ -0.27
CLNS1A-201ENST00000263309 UXTQ9UBK9 157 aaPredicted RBP13.38□□□□□ -0.27
CLNS1A-201ENST00000263309 ZMYM5Q9UJ78 669 aa13.38□□□□□ -0.27
CLNS1A-201ENST00000263309 PCDHB4Q9Y5E5 795 aa13.38□□□□□ -0.27
CLNS1A-201ENST00000263309 CITO14578 2027 aa13.38□□□□□ -0.27
CLNS1A-201ENST00000263309 RBAK-RBAKDNI3L0D1 243 aa13.37□□□□□ -0.27
CLNS1A-201ENST00000263309 VNN1O95497 513 aa13.37□□□□□ -0.27
CLNS1A-201ENST00000263309 TPM1P09493 284 aa13.37□□□□□ -0.27
CLNS1A-201ENST00000263309 WEE2P0C1S8 567 aa13.37□□□□□ -0.27
CLNS1A-201ENST00000263309 DUSP4Q13115 394 aa13.37□□□□□ -0.27
CLNS1A-201ENST00000263309 CUL2Q13617 745 aa13.37□□□□□ -0.27
CLNS1A-201ENST00000263309 CTC1Q2NKJ3 1217 aa13.37□□□□□ -0.27
CLNS1A-201ENST00000263309 CBWD6Q4V339 395 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms