RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 MIEF2Q96C03 454 aa9.62□□□□□ -0.87
MSH4-201ENST00000263187 PRR11Q96HE9 360 aaPredicted RBP9.62□□□□□ -0.87
MSH4-201ENST00000263187 FBXL18Q96ME1 805 aa9.62□□□□□ -0.87
MSH4-201ENST00000263187 CFAP57Q96MR6 1250 aa9.62□□□□□ -0.87
MSH4-201ENST00000263187 PLCD4Q9BRC7 762 aa9.62□□□□□ -0.87
MSH4-201ENST00000263187 ST6GALNAC4Q9H4F1 302 aa9.62□□□□□ -0.87
MSH4-201ENST00000263187 MRPL47Q9HD33 250 aaKnown RBP9.62□□□□□ -0.87
MSH4-201ENST00000263187 SLC17A7Q9P2U7 560 aa9.62□□□□□ -0.87
MSH4-201ENST00000263187 PRKAG3Q9UGI9 489 aa9.62□□□□□ -0.87
MSH4-201ENST00000263187 ZNFX1Q9P2E3 1918 aaKnown RBP9.62□□□□□ -0.87
MSH4-201ENST00000263187 WDR46O15213 610 aaKnown RBP9.62□□□□□ -0.87
MSH4-201ENST00000263187 GRAP2O75791 330 aa9.62□□□□□ -0.87
MSH4-201ENST00000263187 DGAT1O75907 488 aa9.62□□□□□ -0.87
MSH4-201ENST00000263187 ITGBL1O95965 494 aaPredicted RBP9.62□□□□□ -0.87
MSH4-201ENST00000263187 PSAPP07602 524 aa9.62□□□□□ -0.87
MSH4-201ENST00000263187 KCNA2P16389 499 aa9.62□□□□□ -0.87
MSH4-201ENST00000263187 GLRA2P23416 452 aa9.62□□□□□ -0.87
MSH4-201ENST00000263187 CCND2P30279 289 aa9.62□□□□□ -0.87
MSH4-201ENST00000263187 SFNP31947 248 aa9.62□□□□□ -0.87
MSH4-201ENST00000263187 MAPK6Q16659 721 aa9.62□□□□□ -0.87
MSH4-201ENST00000263187 RAB6CQ53S08 254 aa9.62□□□□□ -0.87
MSH4-201ENST00000263187 MDH1BQ5I0G3 518 aa9.62□□□□□ -0.87
MSH4-201ENST00000263187 FAXCQ5TGI0 409 aa9.62□□□□□ -0.87
MSH4-201ENST00000263187 PPP1R21Q6ZMI0 780 aa9.62□□□□□ -0.87
MSH4-201ENST00000263187 SPOCD1Q6ZMY3 1216 aa9.62□□□□□ -0.87
MSH4-201ENST00000263187 C3orf62Q6ZUJ4 267 aa9.62□□□□□ -0.87
MSH4-201ENST00000263187 LRRC71Q8N4P6 559 aa9.62□□□□□ -0.87
MSH4-201ENST00000263187 ZCCHC9Q8N567 271 aaKnown RBP9.62□□□□□ -0.87
MSH4-201ENST00000263187 CEP120Q8N960 986 aa9.62□□□□□ -0.87
MSH4-201ENST00000263187 FAM71DQ8N9W8 422 aa9.62□□□□□ -0.87
MSH4-201ENST00000263187 TFAP2BQ92481 460 aa9.62□□□□□ -0.87
MSH4-201ENST00000263187 CALN1Q9BXU9 219 aa9.62□□□□□ -0.87
MSH4-201ENST00000263187 RAB6CQ9H0N0 254 aa9.62□□□□□ -0.87
MSH4-201ENST00000263187 PARVAQ9NVD7 372 aa9.62□□□□□ -0.87
MSH4-201ENST00000263187 NOP53Q9NZM5 478 aaKnown RBP9.62□□□□□ -0.87
MSH4-201ENST00000263187 CHMP2BQ9UQN3 213 aa9.62□□□□□ -0.87
MSH4-201ENST00000263187 GJA3Q9Y6H8 435 aa9.62□□□□□ -0.87
MSH4-201ENST00000263187 DNALI1O14645 258 aaPredicted RBP9.62□□□□□ -0.87
MSH4-201ENST00000263187 CST8O60676 142 aa9.62□□□□□ -0.87
MSH4-201ENST00000263187 STBD1O95210 358 aa9.62□□□□□ -0.87
MSH4-201ENST00000263187 LYPLA2O95372 231 aa9.62□□□□□ -0.87
MSH4-201ENST00000263187 ASMTLO95671 621 aa9.62□□□□□ -0.87
MSH4-201ENST00000263187 GM2AP17900 193 aa9.62□□□□□ -0.87
MSH4-201ENST00000263187 ATP4AP20648 1035 aa9.62□□□□□ -0.87
MSH4-201ENST00000263187 RFC1P35251 1148 aaPredicted RBP9.62□□□□□ -0.87
MSH4-201ENST00000263187 CTCFP49711 727 aaPredicted RBP9.62□□□□□ -0.87
MSH4-201ENST00000263187 OTUD4Q01804 1114 aaKnown RBP9.62□□□□□ -0.87
MSH4-201ENST00000263187 TLDC1Q6P9B6 456 aa9.62□□□□□ -0.87
MSH4-201ENST00000263187 NPNTQ6UXI9 565 aa9.62□□□□□ -0.87
MSH4-201ENST00000263187 TRIM50Q86XT4 487 aa9.62□□□□□ -0.87
MSH4-201ENST00000263187 KATNAL2Q8IYT4 538 aa9.62□□□□□ -0.87
MSH4-201ENST00000263187 RFWD2Q8NHY2 731 aa9.62□□□□□ -0.87
MSH4-201ENST00000263187 JOSD2Q8TAC2 188 aa9.62□□□□□ -0.87
MSH4-201ENST00000263187 ACTL9Q8TC94 416 aa9.62□□□□□ -0.87
MSH4-201ENST00000263187 PYROXD1Q8WU10 500 aa9.62□□□□□ -0.87
MSH4-201ENST00000263187 MAIP1Q8WWC4 291 aa9.62□□□□□ -0.87
MSH4-201ENST00000263187 L3MBTL3Q96JM7 780 aaPredicted RBP9.62□□□□□ -0.87
MSH4-201ENST00000263187 SYNCQ9H7C4 482 aa9.62□□□□□ -0.87
MSH4-201ENST00000263187 AVENQ9NQS1 362 aaPredicted RBP9.62□□□□□ -0.87
MSH4-201ENST00000263187 ARHGEF3Q9NR81 526 aa9.62□□□□□ -0.87
MSH4-201ENST00000263187 METTL5Q9NRN9 209 aaKnown RBP9.62□□□□□ -0.87
MSH4-201ENST00000263187 POLIQ9UNA4 740 aa9.62□□□□□ -0.87
MSH4-201ENST00000263187 CFAP69A5D8W1 941 aa9.61□□□□□ -0.87
MSH4-201ENST00000263187 FAM155BO75949 473 aa9.61□□□□□ -0.87
MSH4-201ENST00000263187 TJP3O95049 919 aa9.61□□□□□ -0.87
MSH4-201ENST00000263187 UNC5CO95185 931 aa9.61□□□□□ -0.87
MSH4-201ENST00000263187 MAN1A1P33908 653 aa9.61□□□□□ -0.87
MSH4-201ENST00000263187 CETN2P41208 172 aa9.61□□□□□ -0.87
MSH4-201ENST00000263187 CPA2P48052 419 aa9.61□□□□□ -0.87
MSH4-201ENST00000263187 GPX6P59796 221 aa9.61□□□□□ -0.87
MSH4-201ENST00000263187 SPARCL1Q14515 664 aa9.61□□□□□ -0.87
MSH4-201ENST00000263187 CDO1Q16878 200 aa9.61□□□□□ -0.87
MSH4-201ENST00000263187 EAPPQ56P03 285 aaPredicted RBP9.61□□□□□ -0.87
MSH4-201ENST00000263187 PLEKHG4Q58EX7 1191 aa9.61□□□□□ -0.87
MSH4-201ENST00000263187 LRRC6Q86X45 466 aa9.61□□□□□ -0.87
MSH4-201ENST00000263187 SAMD3Q8N6K7 520 aa9.61□□□□□ -0.87
MSH4-201ENST00000263187 EXD1Q8NHP7 514 aa9.61□□□□□ -0.87
MSH4-201ENST00000263187 SLCO2A1Q92959 643 aa9.61□□□□□ -0.87
MSH4-201ENST00000263187 GMLQ99445 158 aa9.61□□□□□ -0.87
MSH4-201ENST00000263187 TRIM56Q9BRZ2 755 aaKnown RBP9.61□□□□□ -0.87
MSH4-201ENST00000263187 MYOZ2Q9NPC6 264 aa9.61□□□□□ -0.87
MSH4-201ENST00000263187 RBBP6Q7Z6E9 1792 aaKnown RBP9.61□□□□□ -0.87
MSH4-201ENST00000263187 MAPK13O15264 365 aa9.61□□□□□ -0.87
MSH4-201ENST00000263187 PSTPIP1O43586 416 aa9.61□□□□□ -0.87
MSH4-201ENST00000263187 ATP2A2P16615 1042 aaKnown RBP9.61□□□□□ -0.87
MSH4-201ENST00000263187 PSMA2P25787 234 aa9.61□□□□□ -0.87
MSH4-201ENST00000263187 IL1R2P27930 398 aa9.61□□□□□ -0.87
MSH4-201ENST00000263187 BPIFB4P59827 614 aa9.61□□□□□ -0.87
MSH4-201ENST00000263187 PSMD6Q15008 389 aa9.61□□□□□ -0.87
MSH4-201ENST00000263187 ANKRD20A2Q5SQ80 823 aa9.61□□□□□ -0.87
MSH4-201ENST00000263187 SH3PXD2AQ5TCZ1 1133 aa9.61□□□□□ -0.87
MSH4-201ENST00000263187 ANKRD20A1Q5TYW2 823 aa9.61□□□□□ -0.87
MSH4-201ENST00000263187 ANKRD20A3Q5VUR7 823 aa9.61□□□□□ -0.87
MSH4-201ENST00000263187 RFWD3Q6PCD5 774 aa9.61□□□□□ -0.87
MSH4-201ENST00000263187 OTOAQ7RTW8 1153 aa9.61□□□□□ -0.87
MSH4-201ENST00000263187 FBXO36Q8NEA4 188 aa9.61□□□□□ -0.87
MSH4-201ENST00000263187 TTC17Q96AE7 1141 aa9.61□□□□□ -0.87
MSH4-201ENST00000263187 IMPG2Q9BZV3 1241 aa9.61□□□□□ -0.87
MSH4-201ENST00000263187 FBXO6Q9NRD1 293 aaPredicted RBP9.61□□□□□ -0.87
MSH4-201ENST00000263187 ARHGAP28Q9P2N2 729 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms