RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 DCDC2Q9UHG0 476 aa13.41□□□□□ -0.26
TTC39A-202ENST00000262676 MORC2Q9Y6X9 1032 aaPredicted RBP13.41□□□□□ -0.26
TTC39A-202ENST00000262676 FLT3P36888 993 aa13.41□□□□□ -0.26
TTC39A-202ENST00000262676 TMEM143Q96AN5 459 aa13.41□□□□□ -0.26
TTC39A-202ENST00000262676 PNMA8BQ9ULN7 279 aaPredicted RBP13.41□□□□□ -0.26
TTC39A-202ENST00000262676 AP3B1O00203 1094 aa13.41□□□□□ -0.26
TTC39A-202ENST00000262676 PDHXO00330 501 aa13.41□□□□□ -0.26
TTC39A-202ENST00000262676 EPB42P16452 691 aa13.41□□□□□ -0.26
TTC39A-202ENST00000262676 NLRP11P59045 1033 aaKnown RBP13.41□□□□□ -0.26
TTC39A-202ENST00000262676 MTHFD1LQ6UB35 978 aa13.41□□□□□ -0.26
TTC39A-202ENST00000262676 ARHGEF38Q9NXL2 777 aa13.41□□□□□ -0.26
TTC39A-202ENST00000262676 CLASP1Q7Z460 1538 aa13.41□□□□□ -0.26
TTC39A-202ENST00000262676 IGF2BP3O00425 579 aaKnown RBP eCLIP13.41□□□□□ -0.26
TTC39A-202ENST00000262676 DSG1Q02413 1049 aa13.41□□□□□ -0.26
TTC39A-202ENST00000262676 GTF2H3Q13889 308 aa13.41□□□□□ -0.26
TTC39A-202ENST00000262676 MIER2Q8N344 545 aa13.41□□□□□ -0.26
TTC39A-202ENST00000262676 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.41□□□□□ -0.26
TTC39A-202ENST00000262676 TRIM51Q9BSJ1 452 aa13.41□□□□□ -0.26
TTC39A-202ENST00000262676 TMEM39AQ9NV64 488 aa13.41□□□□□ -0.26
TTC39A-202ENST00000262676 CDC42BPAQ5VT25 1732 aa13.41□□□□□ -0.26
TTC39A-202ENST00000262676 PDZK1P1A8MUH7 402 aa13.41□□□□□ -0.26
TTC39A-202ENST00000262676 SULT1E1P49888 294 aa13.41□□□□□ -0.26
TTC39A-202ENST00000262676 PSMC5P62195 406 aa13.41□□□□□ -0.26
TTC39A-202ENST00000262676 HPCAP84074 193 aa13.41□□□□□ -0.26
TTC39A-202ENST00000262676 PLIN5Q00G26 463 aa13.41□□□□□ -0.26
TTC39A-202ENST00000262676 COX10Q12887 443 aa13.41□□□□□ -0.26
TTC39A-202ENST00000262676 ARMCX4Q5H9R4 360 aa13.41□□□□□ -0.26
TTC39A-202ENST00000262676 CALML6Q8TD86 181 aa13.41□□□□□ -0.26
TTC39A-202ENST00000262676 BHMTQ93088 406 aa13.41□□□□□ -0.26
TTC39A-202ENST00000262676 PPP1R37O75864 691 aa13.4□□□□□ -0.26
TTC39A-202ENST00000262676 ITGAXP20702 1163 aa13.4□□□□□ -0.26
TTC39A-202ENST00000262676 AKT1P31749 480 aa13.4□□□□□ -0.26
TTC39A-202ENST00000262676 CSE1LP55060 971 aaKnown RBP13.4□□□□□ -0.26
TTC39A-202ENST00000262676 COASYQ13057 564 aa13.4□□□□□ -0.26
TTC39A-202ENST00000262676 IFNLR1Q8IU57 520 aaPredicted RBP13.4□□□□□ -0.26
TTC39A-202ENST00000262676 RTL3Q8N8U3 475 aaKnown RBP13.4□□□□□ -0.26
TTC39A-202ENST00000262676 OR2W6PQ8NHA6 318 aa13.4□□□□□ -0.26
TTC39A-202ENST00000262676 IMPAD1Q9NX62 359 aa13.4□□□□□ -0.26
TTC39A-202ENST00000262676 XPO7Q9UIA9 1087 aaKnown RBP13.4□□□□□ -0.26
TTC39A-202ENST00000262676 EIF2S1P05198 315 aaKnown RBP13.4□□□□□ -0.26
TTC39A-202ENST00000262676 KRT16P08779 473 aa13.4□□□□□ -0.26
TTC39A-202ENST00000262676 DNAJB2P25686 324 aa13.4□□□□□ -0.26
TTC39A-202ENST00000262676 RPS7P62081 194 aaKnown RBP13.4□□□□□ -0.26
TTC39A-202ENST00000262676 AP3B2Q13367 1082 aa13.4□□□□□ -0.26
TTC39A-202ENST00000262676 LAMC2Q13753 1193 aa13.4□□□□□ -0.26
TTC39A-202ENST00000262676 DHX34Q14147 1143 aaKnown RBP13.4□□□□□ -0.26
TTC39A-202ENST00000262676 NFIL3Q16649 462 aa13.4□□□□□ -0.26
TTC39A-202ENST00000262676 ARMC6Q6NXE6 501 aa13.4□□□□□ -0.26
TTC39A-202ENST00000262676 TRPM8Q7Z2W7 1104 aa13.4□□□□□ -0.26
TTC39A-202ENST00000262676 KCNK10P57789 538 aa13.4□□□□□ -0.26
TTC39A-202ENST00000262676 USP39Q53GS9 565 aaKnown RBP13.4□□□□□ -0.26
TTC39A-202ENST00000262676 RSBN1Q5VWQ0 802 aaPredicted RBP13.4□□□□□ -0.26
TTC39A-202ENST00000262676 BTBD8Q5XKL5 378 aa13.4□□□□□ -0.26
TTC39A-202ENST00000262676 XXYLT1Q8NBI6 393 aa13.4□□□□□ -0.26
TTC39A-202ENST00000262676 PSD3Q9NYI0 1048 aa13.4□□□□□ -0.26
TTC39A-202ENST00000262676 LOC100653049A0A140TA62 436 aa13.4□□□□□ -0.26
TTC39A-202ENST00000262676 TPST1O60507 370 aa13.4□□□□□ -0.26
TTC39A-202ENST00000262676 KRT34O76011 436 aa13.4□□□□□ -0.26
TTC39A-202ENST00000262676 AGTP01019 485 aa13.4□□□□□ -0.26
TTC39A-202ENST00000262676 TPP2P29144 1249 aaPredicted RBP13.4□□□□□ -0.26
TTC39A-202ENST00000262676 CPT1AP50416 773 aa13.4□□□□□ -0.26
TTC39A-202ENST00000262676 LRRC71Q8N4P6 559 aa13.4□□□□□ -0.26
TTC39A-202ENST00000262676 C19orf18Q8NEA5 215 aa13.4□□□□□ -0.26
TTC39A-202ENST00000262676 HDHD2Q9H0R4 259 aa13.4□□□□□ -0.26
TTC39A-202ENST00000262676 SLC40A1Q9NP59 571 aa13.4□□□□□ -0.26
TTC39A-202ENST00000262676 PIPSLA2A3N6 862 aa13.4□□□□□ -0.26
TTC39A-202ENST00000262676 PRR23AA6NEV1 266 aa13.4□□□□□ -0.26
TTC39A-202ENST00000262676 APOA4P06727 396 aa13.4□□□□□ -0.26
TTC39A-202ENST00000262676 CYP2C9P11712 490 aa13.4□□□□□ -0.26
TTC39A-202ENST00000262676 VSNL1P62760 191 aa13.4□□□□□ -0.26
TTC39A-202ENST00000262676 RAD54LQ92698 747 aa13.4□□□□□ -0.26
TTC39A-202ENST00000262676 KIF2CQ99661 725 aa13.4□□□□□ -0.26
TTC39A-202ENST00000262676 LXNQ9BS40 222 aa13.4□□□□□ -0.26
TTC39A-202ENST00000262676 SENP6Q9GZR1 1112 aaPredicted RBP13.4□□□□□ -0.26
TTC39A-202ENST00000262676 PARVAQ9NVD7 372 aa13.4□□□□□ -0.26
TTC39A-202ENST00000262676 POTEFA5A3E0 1075 aa13.39□□□□□ -0.27
TTC39A-202ENST00000262676 POTECB2RU33 542 aa13.39□□□□□ -0.27
TTC39A-202ENST00000262676 KLHL2O95198 593 aa13.39□□□□□ -0.27
TTC39A-202ENST00000262676 POTEIP0CG38 1075 aa13.39□□□□□ -0.27
TTC39A-202ENST00000262676 QARSP47897 775 aaKnown RBP13.39□□□□□ -0.27
TTC39A-202ENST00000262676 TRIM32Q13049 653 aa13.39□□□□□ -0.27
TTC39A-202ENST00000262676 PCSK7Q16549 785 aa13.39□□□□□ -0.27
TTC39A-202ENST00000262676 POTEGQ6S5H5 508 aa13.39□□□□□ -0.27
TTC39A-202ENST00000262676 POTEEQ6S8J3 1075 aa13.39□□□□□ -0.27
TTC39A-202ENST00000262676 ERO1BQ86YB8 467 aa13.39□□□□□ -0.27
TTC39A-202ENST00000262676 KRT78Q8N1N4 520 aa13.39□□□□□ -0.27
TTC39A-202ENST00000262676 ARRDC4Q8NCT1 418 aa13.39□□□□□ -0.27
TTC39A-202ENST00000262676 SHCBP1Q8NEM2 672 aa13.39□□□□□ -0.27
TTC39A-202ENST00000262676 FAM25AB3EWG3 89 aa13.39□□□□□ -0.27
TTC39A-202ENST00000262676 FAM25CB3EWG5 89 aa13.39□□□□□ -0.27
TTC39A-202ENST00000262676 FAM25GB3EWG6 89 aa13.39□□□□□ -0.27
TTC39A-202ENST00000262676 EIF3HO15372 352 aaKnown RBP eCLIP13.39□□□□□ -0.27
TTC39A-202ENST00000262676 ASAP3Q8TDY4 903 aa13.39□□□□□ -0.27
TTC39A-202ENST00000262676 PTPRN2Q92932 1015 aa13.39□□□□□ -0.27
TTC39A-202ENST00000262676 FAM129AQ9BZQ8 928 aa13.39□□□□□ -0.27
TTC39A-202ENST00000262676 TK2O00142 265 aa13.39□□□□□ -0.27
TTC39A-202ENST00000262676 APRTP07741 180 aa13.39□□□□□ -0.27
TTC39A-202ENST00000262676 FEN1P39748 380 aaKnown RBP13.39□□□□□ -0.27
TTC39A-202ENST00000262676 PLEKHA7Q6IQ23 1121 aa13.39□□□□□ -0.27
TTC39A-202ENST00000262676 VMP1Q96GC9 406 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms