RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 SARM1Q6SZW1 724 aa17.75■□□□□ 0.43
CHCHD3-201ENST00000262570 ENOSF1Q7L5Y1 443 aa17.75■□□□□ 0.43
CHCHD3-201ENST00000262570 UNC93AQ86WB7 457 aa17.75■□□□□ 0.43
CHCHD3-201ENST00000262570 GLYCTKQ8IVS8 523 aa17.75■□□□□ 0.43
CHCHD3-201ENST00000262570 MYLIPQ8WY64 445 aa17.75■□□□□ 0.43
CHCHD3-201ENST00000262570 JAKMIP2Q96AA8 810 aa17.75■□□□□ 0.43
CHCHD3-201ENST00000262570 TMEM209Q96SK2 561 aa17.75■□□□□ 0.43
CHCHD3-201ENST00000262570 A8MXQ7 604 aa17.74■□□□□ 0.43
CHCHD3-201ENST00000262570 PER2O15055 1255 aa17.74■□□□□ 0.43
CHCHD3-201ENST00000262570 AP5Z1O43299 807 aa17.74■□□□□ 0.43
CHCHD3-201ENST00000262570 PDGFRBP09619 1106 aa17.74■□□□□ 0.43
CHCHD3-201ENST00000262570 UCHL3P15374 230 aa17.74■□□□□ 0.43
CHCHD3-201ENST00000262570 ACO1P21399 889 aaKnown RBP17.74■□□□□ 0.43
CHCHD3-201ENST00000262570 ACAT1P24752 427 aaKnown RBP17.74■□□□□ 0.43
CHCHD3-201ENST00000262570 PBX1P40424 430 aa17.74■□□□□ 0.43
CHCHD3-201ENST00000262570 NDST1P52848 882 aa17.74■□□□□ 0.43
CHCHD3-201ENST00000262570 MFAP3P55082 362 aa17.74■□□□□ 0.43
CHCHD3-201ENST00000262570 YWHAEP62258 255 aaKnown RBP17.74■□□□□ 0.43
CHCHD3-201ENST00000262570 PTPN21Q16825 1174 aa17.74■□□□□ 0.43
CHCHD3-201ENST00000262570 RBM23Q86U06 439 aaKnown RBP17.74■□□□□ 0.43
CHCHD3-201ENST00000262570 WHAMMQ8TF30 809 aa17.74■□□□□ 0.43
CHCHD3-201ENST00000262570 PPP2R3CQ969Q6 453 aa17.74■□□□□ 0.43
CHCHD3-201ENST00000262570 NAA15Q9BXJ9 866 aaKnown RBP17.74■□□□□ 0.43
CHCHD3-201ENST00000262570 ZCWPW1Q9H0M4 648 aa17.74■□□□□ 0.43
CHCHD3-201ENST00000262570 GANQ9H2C0 597 aa17.74■□□□□ 0.43
CHCHD3-201ENST00000262570 TLE6Q9H808 572 aa17.74■□□□□ 0.43
CHCHD3-201ENST00000262570 FAM207AQ9NSI2 230 aaPredicted RBP17.74■□□□□ 0.43
CHCHD3-201ENST00000262570 HMGXB4Q9UGU5 601 aa17.74■□□□□ 0.43
CHCHD3-201ENST00000262570 CDH9Q9ULB4 789 aa17.74■□□□□ 0.43
CHCHD3-201ENST00000262570 EPHB6O15197 1021 aa17.74■□□□□ 0.43
CHCHD3-201ENST00000262570 CBFA2T2O43439 604 aa17.74■□□□□ 0.43
CHCHD3-201ENST00000262570 CLASP2O75122 1294 aaKnown RBP17.74■□□□□ 0.43
CHCHD3-201ENST00000262570 TPM3P06753 285 aa17.74■□□□□ 0.43
CHCHD3-201ENST00000262570 OR4Q2P0C623 313 aa17.74■□□□□ 0.43
CHCHD3-201ENST00000262570 RFX1P22670 979 aa17.74■□□□□ 0.43
CHCHD3-201ENST00000262570 KLRC2P26717 231 aa17.74■□□□□ 0.43
CHCHD3-201ENST00000262570 PLCB2Q00722 1185 aa17.74■□□□□ 0.43
CHCHD3-201ENST00000262570 TSPY1Q01534 308 aa17.74■□□□□ 0.43
CHCHD3-201ENST00000262570 ROR1Q01973 937 aa17.74■□□□□ 0.43
CHCHD3-201ENST00000262570 GPR17Q13304 367 aa17.74■□□□□ 0.43
CHCHD3-201ENST00000262570 DUSP6Q16828 381 aa17.74■□□□□ 0.43
CHCHD3-201ENST00000262570 TCEAL5Q5H9L2 206 aa17.74■□□□□ 0.43
CHCHD3-201ENST00000262570 INTS6LQ5JSJ4 861 aaKnown RBP17.74■□□□□ 0.43
CHCHD3-201ENST00000262570 LRRTM3Q86VH5 581 aa17.74■□□□□ 0.43
CHCHD3-201ENST00000262570 CRYBG2Q8N1P7 616 aa17.74■□□□□ 0.43
CHCHD3-201ENST00000262570 ZNF461Q8TAF7 563 aa17.74■□□□□ 0.43
CHCHD3-201ENST00000262570 PCMTD1Q96MG8 357 aaPredicted RBP17.74■□□□□ 0.43
CHCHD3-201ENST00000262570 TWNKQ96RR1 684 aa17.74■□□□□ 0.43
CHCHD3-201ENST00000262570 SYT15Q9BQS2 421 aa17.74■□□□□ 0.43
CHCHD3-201ENST00000262570 DNAJC12Q9UKB3 198 aa17.74■□□□□ 0.43
CHCHD3-201ENST00000262570 AJAP1Q9UKB5 411 aaPredicted RBP17.74■□□□□ 0.43
CHCHD3-201ENST00000262570 FHOD1Q9Y613 1164 aa17.74■□□□□ 0.43
CHCHD3-201ENST00000262570 REV3LO60673 3130 aa17.73■□□□□ 0.43
CHCHD3-201ENST00000262570 WDR27A2RRH5 827 aa17.73■□□□□ 0.43
CHCHD3-201ENST00000262570 ABLIM3O94929 683 aa17.73■□□□□ 0.43
CHCHD3-201ENST00000262570 C1RP00736 705 aa17.73■□□□□ 0.43
CHCHD3-201ENST00000262570 NRIP1P48552 1158 aa17.73■□□□□ 0.43
CHCHD3-201ENST00000262570 CLCN4P51793 760 aa17.73■□□□□ 0.43
CHCHD3-201ENST00000262570 ARPP19P56211 112 aa17.73■□□□□ 0.43
CHCHD3-201ENST00000262570 IQCEQ6IPM2 695 aa17.73■□□□□ 0.43
CHCHD3-201ENST00000262570 FAM171BQ6P995 826 aa17.73■□□□□ 0.43
CHCHD3-201ENST00000262570 LILRA6Q6PI73 481 aa17.73■□□□□ 0.43
CHCHD3-201ENST00000262570 PALB2Q86YC2 1186 aa17.73■□□□□ 0.43
CHCHD3-201ENST00000262570 NEK11Q8NG66 645 aa17.73■□□□□ 0.43
CHCHD3-201ENST00000262570 TNIP3Q96KP6 325 aa17.73■□□□□ 0.43
CHCHD3-201ENST00000262570 CDCA3Q99618 268 aaPredicted RBP17.73■□□□□ 0.43
CHCHD3-201ENST00000262570 PKMYT1Q99640 499 aa17.73■□□□□ 0.43
CHCHD3-201ENST00000262570 NT5C1AQ9BXI3 368 aa17.73■□□□□ 0.43
CHCHD3-201ENST00000262570 DPEP3Q9H4B8 488 aa17.73■□□□□ 0.43
CHCHD3-201ENST00000262570 GTF3C4Q9UKN8 822 aa17.73■□□□□ 0.43
CHCHD3-201ENST00000262570 CNTN6Q9UQ52 1028 aa17.73■□□□□ 0.43
CHCHD3-201ENST00000262570 DAAM1Q9Y4D1 1078 aa17.73■□□□□ 0.43
CHCHD3-201ENST00000262570 ATG2AQ2TAZ0 1938 aa17.73■□□□□ 0.43
CHCHD3-201ENST00000262570 MYBPHLA2RUH7 354 aa17.72■□□□□ 0.43
CHCHD3-201ENST00000262570 TGM5O43548 720 aa17.72■□□□□ 0.43
CHCHD3-201ENST00000262570 ATP2C2O75185 946 aa17.72■□□□□ 0.43
CHCHD3-201ENST00000262570 CPB1P15086 417 aa17.72■□□□□ 0.43
CHCHD3-201ENST00000262570 PTPN1P18031 435 aaKnown RBP17.72■□□□□ 0.43
CHCHD3-201ENST00000262570 GTF2F1P35269 517 aaKnown RBP eCLIP17.72■□□□□ 0.43
CHCHD3-201ENST00000262570 PSMC1P62191 440 aaKnown RBP17.72■□□□□ 0.43
CHCHD3-201ENST00000262570 HYAL1Q12794 435 aa17.72■□□□□ 0.43
CHCHD3-201ENST00000262570 ARHGAP44Q17R89 818 aa17.72■□□□□ 0.43
CHCHD3-201ENST00000262570 ZNF394Q53GI3 561 aa17.72■□□□□ 0.43
CHCHD3-201ENST00000262570 TPGS2Q68CL5 300 aa17.72■□□□□ 0.43
CHCHD3-201ENST00000262570 SMYD5Q6GMV2 418 aa17.72■□□□□ 0.43
CHCHD3-201ENST00000262570 PPFIBP1Q86W92 1011 aa17.72■□□□□ 0.43
CHCHD3-201ENST00000262570 DCP1BQ8IZD4 617 aaKnown RBP17.72■□□□□ 0.43
CHCHD3-201ENST00000262570 SHC3Q92529 594 aa17.72■□□□□ 0.43
CHCHD3-201ENST00000262570 ELOVL4Q9GZR5 314 aa17.72■□□□□ 0.43
CHCHD3-201ENST00000262570 CRTAC1Q9NQ79 661 aa17.72■□□□□ 0.43
CHCHD3-201ENST00000262570 EYSQ5T1H1 3165 aa17.72■□□□□ 0.43
CHCHD3-201ENST00000262570 ATF2P15336 505 aa17.71■□□□□ 0.43
CHCHD3-201ENST00000262570 FOSL2P15408 326 aa17.71■□□□□ 0.43
CHCHD3-201ENST00000262570 RAD23BP54727 409 aa17.71■□□□□ 0.43
CHCHD3-201ENST00000262570 POLR2FP61218 127 aaKnown RBP17.71■□□□□ 0.43
CHCHD3-201ENST00000262570 SMARCB1Q12824 385 aa17.71■□□□□ 0.43
CHCHD3-201ENST00000262570 ORC1Q13415 861 aa17.71■□□□□ 0.43
CHCHD3-201ENST00000262570 KCNC3Q14003 757 aa17.71■□□□□ 0.43
CHCHD3-201ENST00000262570 SLC39A12Q504Y0 691 aa17.71■□□□□ 0.43
CHCHD3-201ENST00000262570 TMEM270Q6UE05 265 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms