RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 MYBL1P10243 752 aa14.38□□□□□ -0.11
VMP1-201ENST00000262291 VPS41P49754 854 aa14.38□□□□□ -0.11
VMP1-201ENST00000262291 ZNF252P-AS1Q0IIN9 211 aa14.38□□□□□ -0.11
VMP1-201ENST00000262291 PTPN20Q4JDL3 420 aa14.38□□□□□ -0.11
VMP1-201ENST00000262291 UBAP2Q5T6F2 1119 aaKnown RBP14.38□□□□□ -0.11
VMP1-201ENST00000262291 PLEKHA7Q6IQ23 1121 aa14.38□□□□□ -0.11
VMP1-201ENST00000262291 CHADLQ6NUI6 762 aa14.38□□□□□ -0.11
VMP1-201ENST00000262291 RGMBQ6NW40 437 aa14.38□□□□□ -0.11
VMP1-201ENST00000262291 DNAJC24Q6P3W2 148 aa14.38□□□□□ -0.11
VMP1-201ENST00000262291 DCUN1D2Q6PH85 259 aa14.38□□□□□ -0.11
VMP1-201ENST00000262291 SESTD1Q86VW0 696 aa14.38□□□□□ -0.11
VMP1-201ENST00000262291 EMC1Q8N766 993 aa14.38□□□□□ -0.11
VMP1-201ENST00000262291 C12orf29Q8N999 325 aa14.38□□□□□ -0.11
VMP1-201ENST00000262291 SLC4A11Q8NBS3 891 aa14.38□□□□□ -0.11
VMP1-201ENST00000262291 TMEM35BQ8NCS4 154 aa14.38□□□□□ -0.11
VMP1-201ENST00000262291 FEZF2Q8TBJ5 459 aa14.38□□□□□ -0.11
VMP1-201ENST00000262291 RUBCNQ92622 972 aa14.38□□□□□ -0.11
VMP1-201ENST00000262291 TRIM11Q96F44 468 aa14.38□□□□□ -0.11
VMP1-201ENST00000262291 DDX27Q96GQ7 796 aaKnown RBP14.38□□□□□ -0.11
VMP1-201ENST00000262291 HEXIM2Q96MH2 286 aaKnown RBP14.38□□□□□ -0.11
VMP1-201ENST00000262291 RUFY1Q96T51 708 aa14.38□□□□□ -0.11
VMP1-201ENST00000262291 LRRC4CQ9HCJ2 640 aa14.38□□□□□ -0.11
VMP1-201ENST00000262291 CAPN7Q9Y6W3 813 aa14.38□□□□□ -0.11
VMP1-201ENST00000262291 HTTP42858 3142 aa14.38□□□□□ -0.11
VMP1-201ENST00000262291 CCDC189A1A4V9 331 aa14.37□□□□□ -0.11
VMP1-201ENST00000262291 F2P00734 622 aa14.37□□□□□ -0.11
VMP1-201ENST00000262291 RALAP11233 206 aa14.37□□□□□ -0.11
VMP1-201ENST00000262291 HOXD8P13378 290 aaPredicted RBP14.37□□□□□ -0.11
VMP1-201ENST00000262291 KRT10P13645 584 aa14.37□□□□□ -0.11
VMP1-201ENST00000262291 PTGIRP43119 386 aa14.37□□□□□ -0.11
VMP1-201ENST00000262291 PSEN2P49810 448 aa14.37□□□□□ -0.11
VMP1-201ENST00000262291 RPAINQ86UA6 219 aa14.37□□□□□ -0.11
VMP1-201ENST00000262291 IFNLR1Q8IU57 520 aaPredicted RBP14.37□□□□□ -0.11
VMP1-201ENST00000262291 UBLCP1Q8WVY7 318 aaPredicted RBP14.37□□□□□ -0.11
VMP1-201ENST00000262291 GJD2Q9UKL4 321 aa14.37□□□□□ -0.11
VMP1-201ENST00000262291 KIF1CO43896 1103 aaKnown RBP14.37□□□□□ -0.11
VMP1-201ENST00000262291 SATB1Q01826 763 aa14.37□□□□□ -0.11
VMP1-201ENST00000262291 C1QBPQ07021 282 aaKnown RBP14.37□□□□□ -0.11
VMP1-201ENST00000262291 UAP1Q16222 522 aaPredicted RBP14.37□□□□□ -0.11
VMP1-201ENST00000262291 TTMPQ5BVD1 217 aa14.37□□□□□ -0.11
VMP1-201ENST00000262291 C17orf99Q6UX52 265 aa14.37□□□□□ -0.11
VMP1-201ENST00000262291 BCAS4Q8TDM0 211 aa14.37□□□□□ -0.11
VMP1-201ENST00000262291 GCOM2Q9BZD3 368 aaPredicted RBP14.37□□□□□ -0.11
VMP1-201ENST00000262291 RNF39Q9H2S5 420 aa14.37□□□□□ -0.11
VMP1-201ENST00000262291 PARVAQ9NVD7 372 aa14.37□□□□□ -0.11
VMP1-201ENST00000262291 PIN4Q9Y237 131 aaKnown RBP14.37□□□□□ -0.11
VMP1-201ENST00000262291 PLAAQ9Y263 795 aa14.37□□□□□ -0.11
VMP1-201ENST00000262291 H0YHG0 523 aa14.36□□□□□ -0.11
VMP1-201ENST00000262291 HSD17B3P37058 310 aa14.36□□□□□ -0.11
VMP1-201ENST00000262291 RPL21P46778 160 aaKnown RBP14.36□□□□□ -0.11
VMP1-201ENST00000262291 NDST1P52848 882 aa14.36□□□□□ -0.11
VMP1-201ENST00000262291 POU5F1BQ06416 359 aa14.36□□□□□ -0.11
VMP1-201ENST00000262291 ADCY2Q08462 1091 aa14.36□□□□□ -0.11
VMP1-201ENST00000262291 SGO2Q562F6 1265 aa14.36□□□□□ -0.11
VMP1-201ENST00000262291 FAM182AQ5T1J6 154 aa14.36□□□□□ -0.11
VMP1-201ENST00000262291 JOSD2Q8TAC2 188 aa14.36□□□□□ -0.11
VMP1-201ENST00000262291 UHMK1Q8TAS1 419 aaKnown RBP14.36□□□□□ -0.11
VMP1-201ENST00000262291 CPXM1Q96SM3 734 aa14.36□□□□□ -0.11
VMP1-201ENST00000262291 ERP44Q9BS26 406 aa14.36□□□□□ -0.11
VMP1-201ENST00000262291 BCO2Q9BYV7 579 aa14.36□□□□□ -0.11
VMP1-201ENST00000262291 TRIM6Q9C030 488 aaPredicted RBP14.36□□□□□ -0.11
VMP1-201ENST00000262291 SYNCQ9H7C4 482 aa14.36□□□□□ -0.11
VMP1-201ENST00000262291 MRPL47Q9HD33 250 aaKnown RBP14.36□□□□□ -0.11
VMP1-201ENST00000262291 ATP8A1Q9Y2Q0 1164 aa14.36□□□□□ -0.11
VMP1-201ENST00000262291 SCN1AP35498 2009 aa14.36□□□□□ -0.11
VMP1-201ENST00000262291 MANSC4A6NHS7 340 aaPredicted RBP14.36□□□□□ -0.11
VMP1-201ENST00000262291 M0QYV0 167 aa14.36□□□□□ -0.11
VMP1-201ENST00000262291 C6orf222P0C671 652 aaPredicted RBP14.36□□□□□ -0.11
VMP1-201ENST00000262291 COILP38432 576 aaPredicted RBP14.36□□□□□ -0.11
VMP1-201ENST00000262291 DHX9Q08211 1270 aaKnown RBP14.36□□□□□ -0.11
VMP1-201ENST00000262291 TRIM32Q13049 653 aa14.36□□□□□ -0.11
VMP1-201ENST00000262291 CUL1Q13616 776 aa14.36□□□□□ -0.11
VMP1-201ENST00000262291 SMTNL2Q2TAL5 461 aa14.36□□□□□ -0.11
VMP1-201ENST00000262291 TRPV1Q8NER1 839 aa14.36□□□□□ -0.11
VMP1-201ENST00000262291 GIMAP7Q8NHV1 300 aa14.36□□□□□ -0.11
VMP1-201ENST00000262291 HAUS1Q96CS2 278 aa14.36□□□□□ -0.11
VMP1-201ENST00000262291 AP5M1Q9H0R1 490 aa14.36□□□□□ -0.11
VMP1-201ENST00000262291 GOLGA2P5Q9HBQ8 144 aa14.36□□□□□ -0.11
VMP1-201ENST00000262291 CACNG4Q9UBN1 327 aa14.36□□□□□ -0.11
VMP1-201ENST00000262291 ABT1Q9ULW3 272 aaKnown RBP14.36□□□□□ -0.11
VMP1-201ENST00000262291 CITO14578 2027 aa14.36□□□□□ -0.11
VMP1-201ENST00000262291 MICAL2O94851 1124 aa14.35□□□□□ -0.11
VMP1-201ENST00000262291 PGK1P00558 417 aa14.35□□□□□ -0.11
VMP1-201ENST00000262291 PTPN11Q06124 597 aaPredicted RBP14.35□□□□□ -0.11
VMP1-201ENST00000262291 DUPD1Q68J44 220 aa14.35□□□□□ -0.11
VMP1-201ENST00000262291 FBXO25Q8TCJ0 367 aa14.35□□□□□ -0.11
VMP1-201ENST00000262291 FAM49BQ9NUQ9 324 aa14.35□□□□□ -0.11
VMP1-201ENST00000262291 DNAJC17Q9NVM6 304 aaKnown RBP14.35□□□□□ -0.11
VMP1-201ENST00000262291 MTUS1Q9ULD2 1270 aa14.35□□□□□ -0.11
VMP1-201ENST00000262291 SNX9Q9Y5X1 595 aa14.35□□□□□ -0.11
VMP1-201ENST00000262291 NRCAMQ92823 1304 aa14.35□□□□□ -0.11
VMP1-201ENST00000262291 TMEM191CA6NGB0 347 aa14.35□□□□□ -0.11
VMP1-201ENST00000262291 RRN3P2A6NIE6 340 aa14.35□□□□□ -0.11
VMP1-201ENST00000262291 GRAP2O75791 330 aa14.35□□□□□ -0.11
VMP1-201ENST00000262291 ERBB2P04626 1255 aa14.35□□□□□ -0.11
VMP1-201ENST00000262291 ATF7P17544 494 aaPredicted RBP14.35□□□□□ -0.11
VMP1-201ENST00000262291 CYP3A5P20815 502 aa14.35□□□□□ -0.11
VMP1-201ENST00000262291 RFC1P35251 1148 aaPredicted RBP14.35□□□□□ -0.11
VMP1-201ENST00000262291 RGS7P49802 495 aa14.35□□□□□ -0.11
VMP1-201ENST00000262291 IRAK1P51617 712 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms