RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 CETN1Q12798 172 aa20.06■□□□□ 0.8
COL4A3BP-201ENST00000261415 BIRC3Q13489 604 aa20.06■□□□□ 0.8
COL4A3BP-201ENST00000261415 DPY19L2P1Q6NXN4 242 aa20.06■□□□□ 0.8
COL4A3BP-201ENST00000261415 CPLX4Q7Z7G2 160 aa20.06■□□□□ 0.8
COL4A3BP-201ENST00000261415 AGAP11Q8TF27 550 aa20.06■□□□□ 0.8
COL4A3BP-201ENST00000261415 ZNF516Q92618 1163 aa20.06■□□□□ 0.8
COL4A3BP-201ENST00000261415 FAM84AQ96KN4 292 aa20.06■□□□□ 0.8
COL4A3BP-201ENST00000261415 GORASP1Q9BQQ3 440 aa20.06■□□□□ 0.8
COL4A3BP-201ENST00000261415 AGO3Q9H9G7 860 aaKnown RBP20.06■□□□□ 0.8
COL4A3BP-201ENST00000261415 RPF1Q9H9Y2 349 aaKnown RBP20.06■□□□□ 0.8
COL4A3BP-201ENST00000261415 PLCB1Q9NQ66 1216 aa20.06■□□□□ 0.8
COL4A3BP-201ENST00000261415 SLC12A4Q9UP95 1085 aa20.06■□□□□ 0.8
COL4A3BP-201ENST00000261415 A0A1W2PQJ5 194 aa20.06■□□□□ 0.8
COL4A3BP-201ENST00000261415 ATP2C2O75185 946 aa20.06■□□□□ 0.8
COL4A3BP-201ENST00000261415 RNF8O76064 485 aa20.06■□□□□ 0.8
COL4A3BP-201ENST00000261415 CD4P01730 458 aa20.06■□□□□ 0.8
COL4A3BP-201ENST00000261415 ACTN1P12814 892 aa20.06■□□□□ 0.8
COL4A3BP-201ENST00000261415 GRM5P41594 1212 aa20.06■□□□□ 0.8
COL4A3BP-201ENST00000261415 PAFAH1B1P43034 410 aa20.06■□□□□ 0.8
COL4A3BP-201ENST00000261415 SLC7A5Q01650 507 aa20.06■□□□□ 0.8
COL4A3BP-201ENST00000261415 NFX1Q12986 1120 aaKnown RBP20.06■□□□□ 0.8
COL4A3BP-201ENST00000261415 BYSLQ13895 437 aaKnown RBP20.06■□□□□ 0.8
COL4A3BP-201ENST00000261415 QPCTQ16769 361 aa20.06■□□□□ 0.8
COL4A3BP-201ENST00000261415 EPC2Q52LR7 807 aa20.06■□□□□ 0.8
COL4A3BP-201ENST00000261415 SV2AQ7L0J3 742 aa20.06■□□□□ 0.8
COL4A3BP-201ENST00000261415 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.06■□□□□ 0.84e-7■■■■■ 58.1
COL4A3BP-201ENST00000261415 PIK3R5Q8WYR1 880 aa20.06■□□□□ 0.8
COL4A3BP-201ENST00000261415 SIX2Q9NPC8 291 aa20.06■□□□□ 0.8
COL4A3BP-201ENST00000261415 GDF3Q9NR23 364 aa20.06■□□□□ 0.8
COL4A3BP-201ENST00000261415 LUC7L2Q9Y383 392 aaKnown RBP20.06■□□□□ 0.8
COL4A3BP-201ENST00000261415 MROH7Q68CQ1 1323 aa20.06■□□□□ 0.8
COL4A3BP-201ENST00000261415 MYZAPP0CAP1 466 aa20.05■□□□□ 0.8
COL4A3BP-201ENST00000261415 RANBP1P43487 201 aa20.05■□□□□ 0.8
COL4A3BP-201ENST00000261415 ATN1P54259 1190 aaPredicted RBP20.05■□□□□ 0.8
COL4A3BP-201ENST00000261415 POU5F1Q01860 360 aaKnown RBP20.05■□□□□ 0.8
COL4A3BP-201ENST00000261415 CUL3Q13618 768 aa20.05■□□□□ 0.8
COL4A3BP-201ENST00000261415 SURF1Q15526 300 aa20.05■□□□□ 0.8
COL4A3BP-201ENST00000261415 IFI16Q16666 785 aaKnown RBP20.05■□□□□ 0.8
COL4A3BP-201ENST00000261415 C15orf39Q6ZRI6 1047 aa20.05■□□□□ 0.8
COL4A3BP-201ENST00000261415 DIS3LQ8TF46 1054 aaKnown RBP20.05■□□□□ 0.8
COL4A3BP-201ENST00000261415 HINFPQ9BQA5 517 aa20.05■□□□□ 0.8
COL4A3BP-201ENST00000261415 GANQ9H2C0 597 aa20.05■□□□□ 0.8
COL4A3BP-201ENST00000261415 GPR182O15218 404 aa20.05■□□□□ 0.8
COL4A3BP-201ENST00000261415 KIF4AO95239 1232 aa20.05■□□□□ 0.8
COL4A3BP-201ENST00000261415 HPDP32754 393 aaPredicted RBP20.05■□□□□ 0.8
COL4A3BP-201ENST00000261415 LPIN1Q14693 890 aa20.05■□□□□ 0.8
COL4A3BP-201ENST00000261415 UBXN11Q5T124 520 aa20.05■□□□□ 0.8
COL4A3BP-201ENST00000261415 ARMC3Q5W041 872 aa20.05■□□□□ 0.8
COL4A3BP-201ENST00000261415 TRAF7Q6Q0C0 670 aa20.05■□□□□ 0.8
COL4A3BP-201ENST00000261415 WDR49Q8IV35 697 aa20.05■□□□□ 0.8
COL4A3BP-201ENST00000261415 LMO3Q8TAP4 145 aa20.05■□□□□ 0.8
COL4A3BP-201ENST00000261415 DNAJC7Q99615 494 aa20.05■□□□□ 0.8
COL4A3BP-201ENST00000261415 OSBPL1AQ9BXW6 950 aa20.05■□□□□ 0.8
COL4A3BP-201ENST00000261415 INTS2Q9H0H0 1204 aaKnown RBP20.05■□□□□ 0.8
COL4A3BP-201ENST00000261415 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.05■□□□□ 0.8
COL4A3BP-201ENST00000261415 CEP72Q9P209 647 aa20.05■□□□□ 0.8
COL4A3BP-201ENST00000261415 COQ4Q9Y3A0 265 aa20.05■□□□□ 0.8
COL4A3BP-201ENST00000261415 PQBP1O60828 265 aaKnown RBP20.04■□□□□ 0.8
COL4A3BP-201ENST00000261415 IL18RAPO95256 599 aa20.04■□□□□ 0.8
COL4A3BP-201ENST00000261415 COL6A1P12109 1028 aa20.04■□□□□ 0.8
COL4A3BP-201ENST00000261415 ZACNQ401N2 412 aa20.04■□□□□ 0.8
COL4A3BP-201ENST00000261415 KLHDC7AQ5VTJ3 777 aa20.04■□□□□ 0.8
COL4A3BP-201ENST00000261415 SLC39A5Q6ZMH5 540 aa20.04■□□□□ 0.8
COL4A3BP-201ENST00000261415 CACNA2D4Q7Z3S7 1137 aa20.04■□□□□ 0.8
COL4A3BP-201ENST00000261415 CCDC197Q8NCU1 140 aa20.04■□□□□ 0.8
COL4A3BP-201ENST00000261415 RBM41Q96IZ5 413 aaKnown RBP20.04■□□□□ 0.8
COL4A3BP-201ENST00000261415 ACAP3Q96P50 834 aa20.04■□□□□ 0.8
COL4A3BP-201ENST00000261415 ERVK-5Q9HDB9 667 aa20.04■□□□□ 0.8
COL4A3BP-201ENST00000261415 MKI67P46013 3256 aaKnown RBP20.04■□□□□ 0.8
COL4A3BP-201ENST00000261415 TET1Q8NFU7 2136 aa20.04■□□□□ 0.8
COL4A3BP-201ENST00000261415 C4BPAP04003 597 aaKnown RBP20.04■□□□□ 0.8
COL4A3BP-201ENST00000261415 CD52P31358 61 aa20.04■□□□□ 0.8
COL4A3BP-201ENST00000261415 POLR2FP61218 127 aaKnown RBP20.04■□□□□ 0.8
COL4A3BP-201ENST00000261415 ZBED6P86452 979 aa20.04■□□□□ 0.8
COL4A3BP-201ENST00000261415 TWF2Q6IBS0 349 aaKnown RBP20.04■□□□□ 0.8
COL4A3BP-201ENST00000261415 ANKLE1Q8NAG6 615 aa20.04■□□□□ 0.8
COL4A3BP-201ENST00000261415 OR5B17Q8NGF7 314 aa20.04■□□□□ 0.8
COL4A3BP-201ENST00000261415 EDEM3Q9BZQ6 932 aa20.04■□□□□ 0.8
COL4A3BP-201ENST00000261415 NXF3Q9H4D5 531 aaKnown RBP20.04■□□□□ 0.8
COL4A3BP-201ENST00000261415 PADI3Q9ULW8 664 aa20.04■□□□□ 0.8
COL4A3BP-201ENST00000261415 HES2Q9Y543 173 aa20.04■□□□□ 0.8
COL4A3BP-201ENST00000261415 SQORQ9Y6N5 450 aa20.04■□□□□ 0.8
COL4A3BP-201ENST00000261415 TDRD15B5MCY1 1934 aaKnown RBP20.03■□□□□ 0.8
COL4A3BP-201ENST00000261415 LRRN2O75325 713 aa20.03■□□□□ 0.8
COL4A3BP-201ENST00000261415 TACC1O75410 805 aa20.03■□□□□ 0.8
COL4A3BP-201ENST00000261415 VIMP08670 466 aaKnown RBP20.03■□□□□ 0.8
COL4A3BP-201ENST00000261415 UCHL3P15374 230 aa20.03■□□□□ 0.8
COL4A3BP-201ENST00000261415 MRPS35P82673 323 aaKnown RBP20.03■□□□□ 0.8
COL4A3BP-201ENST00000261415 KIF5AQ12840 1032 aa20.03■□□□□ 0.8
COL4A3BP-201ENST00000261415 DYNC1I2Q13409 638 aaKnown RBP20.03■□□□□ 0.8
COL4A3BP-201ENST00000261415 SLC10A6Q3KNW5 377 aa20.03■□□□□ 0.8
COL4A3BP-201ENST00000261415 TDRD10Q5VZ19 366 aaKnown RBP20.03■□□□□ 0.8
COL4A3BP-201ENST00000261415 USP38Q8NB14 1042 aa20.03■□□□□ 0.8
COL4A3BP-201ENST00000261415 FBXL13Q8NEE6 735 aa20.03■□□□□ 0.8
COL4A3BP-201ENST00000261415 TAS1R2Q8TE23 839 aa20.03■□□□□ 0.8
COL4A3BP-201ENST00000261415 NLRC4Q9NPP4 1024 aa20.03■□□□□ 0.8
COL4A3BP-201ENST00000261415 SNTG2Q9NY99 539 aa20.03■□□□□ 0.8
COL4A3BP-201ENST00000261415 LACTBL1A8MY62 500 aa20.02■□□□□ 0.8
COL4A3BP-201ENST00000261415 PYGBP11216 843 aa20.02■□□□□ 0.8
COL4A3BP-201ENST00000261415 ANKRD33Q7Z3H0 272 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms