RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 CYFIP2Q96F07 1278 aa12.63□□□□□ -0.39
COL8A1-201ENST00000261037 CPB2Q96IY4 423 aa12.63□□□□□ -0.39
COL8A1-201ENST00000261037 TARS2Q9BW92 718 aaKnown RBP12.63□□□□□ -0.39
COL8A1-201ENST00000261037 ENTPD3O75355 529 aa12.62□□□□□ -0.39
COL8A1-201ENST00000261037 TRADDQ15628 312 aa12.62□□□□□ -0.39
COL8A1-201ENST00000261037 LRIG3Q6UXM1 1119 aa12.62□□□□□ -0.39
COL8A1-201ENST00000261037 ADCK1Q86TW2 530 aa12.62□□□□□ -0.39
COL8A1-201ENST00000261037 PRPF39Q86UA1 669 aaKnown RBP12.62□□□□□ -0.39
COL8A1-201ENST00000261037 TBX3O15119 743 aa12.62□□□□□ -0.39
COL8A1-201ENST00000261037 KLHDC7AQ5VTJ3 777 aa12.62□□□□□ -0.39
COL8A1-201ENST00000261037 DCP1BQ8IZD4 617 aaKnown RBP12.62□□□□□ -0.39
COL8A1-201ENST00000261037 TC2NQ8N9U0 490 aa12.62□□□□□ -0.39
COL8A1-201ENST00000261037 INPP5DQ92835 1189 aa12.62□□□□□ -0.39
COL8A1-201ENST00000261037 SLC38A7Q9NVC3 462 aa12.62□□□□□ -0.39
COL8A1-201ENST00000261037 DPP3Q9NY33 737 aa12.62□□□□□ -0.39
COL8A1-201ENST00000261037 FAM47DPA6NHR8 397 aa12.62□□□□□ -0.39
COL8A1-201ENST00000261037 NCF1BA6NI72 391 aaPredicted RBP12.62□□□□□ -0.39
COL8A1-201ENST00000261037 NCF1CA8MVU1 366 aaPredicted RBP12.62□□□□□ -0.39
COL8A1-201ENST00000261037 PPP1R37O75864 691 aa12.62□□□□□ -0.39
COL8A1-201ENST00000261037 GYPCP04921 128 aa12.62□□□□□ -0.39
COL8A1-201ENST00000261037 POLBP06746 335 aa12.62□□□□□ -0.39
COL8A1-201ENST00000261037 PLEKP08567 350 aaPredicted RBP12.62□□□□□ -0.39
COL8A1-201ENST00000261037 NCF1P14598 390 aaPredicted RBP12.62□□□□□ -0.39
COL8A1-201ENST00000261037 DPEP1P16444 411 aa12.62□□□□□ -0.39
COL8A1-201ENST00000261037 FUT11Q495W5 492 aa12.62□□□□□ -0.39
COL8A1-201ENST00000261037 HHIPL2Q6UWX4 724 aa12.62□□□□□ -0.39
COL8A1-201ENST00000261037 GPRC5AQ8NFJ5 357 aa12.62□□□□□ -0.39
COL8A1-201ENST00000261037 ERP27Q96DN0 273 aa12.62□□□□□ -0.39
COL8A1-201ENST00000261037 CINPQ9BW66 212 aaPredicted RBP12.62□□□□□ -0.39
COL8A1-201ENST00000261037 FAM32AQ9Y421 112 aaKnown RBP12.62□□□□□ -0.39
COL8A1-201ENST00000261037 ZBTB39O15060 712 aa12.62□□□□□ -0.39
COL8A1-201ENST00000261037 NTSR2O95665 410 aa12.62□□□□□ -0.39
COL8A1-201ENST00000261037 HARS2P49590 506 aaKnown RBP12.62□□□□□ -0.39
COL8A1-201ENST00000261037 SERPINB9P50453 376 aa12.62□□□□□ -0.39
COL8A1-201ENST00000261037 CDC42EP1Q00587 391 aa12.62□□□□□ -0.39
COL8A1-201ENST00000261037 PLIN5Q00G26 463 aa12.62□□□□□ -0.39
COL8A1-201ENST00000261037 WASHC5Q12768 1159 aa12.62□□□□□ -0.39
COL8A1-201ENST00000261037 PDK1Q15118 436 aa12.62□□□□□ -0.39
COL8A1-201ENST00000261037 MEI1Q5TIA1 1274 aa12.62□□□□□ -0.39
COL8A1-201ENST00000261037 C16orf89Q6UX73 402 aa12.62□□□□□ -0.39
COL8A1-201ENST00000261037 HORMAD1Q86X24 394 aa12.62□□□□□ -0.39
COL8A1-201ENST00000261037 FEZF2Q8TBJ5 459 aa12.62□□□□□ -0.39
COL8A1-201ENST00000261037 THAP2Q9H0W7 228 aa12.62□□□□□ -0.39
COL8A1-201ENST00000261037 PKD2L2Q9NZM6 624 aa12.62□□□□□ -0.39
COL8A1-201ENST00000261037 PAK5Q9P286 719 aa12.62□□□□□ -0.39
COL8A1-201ENST00000261037 MORC2Q9Y6X9 1032 aaPredicted RBP12.62□□□□□ -0.39
COL8A1-201ENST00000261037 IGSF9BQ9UPX0 1349 aa12.62□□□□□ -0.39
COL8A1-201ENST00000261037 TMEM120BA0PK00 339 aa12.61□□□□□ -0.39
COL8A1-201ENST00000261037 H0Y626 953 aa12.61□□□□□ -0.39
COL8A1-201ENST00000261037 EIF3DO15371 548 aaKnown RBP eCLIP12.61□□□□□ -0.39
COL8A1-201ENST00000261037 MAGEB2O15479 319 aa12.61□□□□□ -0.39
COL8A1-201ENST00000261037 TBC1D4O60343 1298 aa12.61□□□□□ -0.39
COL8A1-201ENST00000261037 SGPL1O95470 568 aa12.61□□□□□ -0.39
COL8A1-201ENST00000261037 EPB42P16452 691 aa12.61□□□□□ -0.39
COL8A1-201ENST00000261037 YY1P25490 414 aa12.61□□□□□ -0.39
COL8A1-201ENST00000261037 PAN2Q504Q3 1202 aaKnown RBP12.61□□□□□ -0.39
COL8A1-201ENST00000261037 GLB1LQ6UWU2 654 aa12.61□□□□□ -0.39
COL8A1-201ENST00000261037 WNK4Q96J92 1243 aa12.61□□□□□ -0.39
COL8A1-201ENST00000261037 OLFM3Q96PB7 478 aa12.61□□□□□ -0.39
COL8A1-201ENST00000261037 NIF3L1Q9GZT8 377 aa12.61□□□□□ -0.39
COL8A1-201ENST00000261037 GPRC5CQ9NQ84 441 aa12.61□□□□□ -0.39
COL8A1-201ENST00000261037 ERAP1Q9NZ08 941 aa12.61□□□□□ -0.39
COL8A1-201ENST00000261037 C17orf102A2RUQ5 167 aa12.61□□□□□ -0.39
COL8A1-201ENST00000261037 UBE2Q2LH0YL09 131 aa12.61□□□□□ -0.39
COL8A1-201ENST00000261037 AP3B1O00203 1094 aa12.61□□□□□ -0.39
COL8A1-201ENST00000261037 ARHGEF9O43307 516 aa12.61□□□□□ -0.39
COL8A1-201ENST00000261037 CASP4P49662 377 aa12.61□□□□□ -0.39
COL8A1-201ENST00000261037 ZNF669Q96BR6 464 aaPredicted RBP12.61□□□□□ -0.39
COL8A1-201ENST00000261037 CCT8L2Q96SF2 557 aa12.61□□□□□ -0.39
COL8A1-201ENST00000261037 KCND2Q9NZV8 630 aa12.61□□□□□ -0.39
COL8A1-201ENST00000261037 USP15Q9Y4E8 981 aaPredicted RBP12.61□□□□□ -0.39
COL8A1-201ENST00000261037 RSPH10B2B2RC85 870 aa12.61□□□□□ -0.39
COL8A1-201ENST00000261037 CTDNEP1O95476 244 aa12.61□□□□□ -0.39
COL8A1-201ENST00000261037 RSPH10BP0C881 870 aa12.61□□□□□ -0.39
COL8A1-201ENST00000261037 THPOP40225 353 aa12.61□□□□□ -0.39
COL8A1-201ENST00000261037 ACADSBP45954 432 aa12.61□□□□□ -0.39
COL8A1-201ENST00000261037 ALDH1A3P47895 512 aa12.61□□□□□ -0.39
COL8A1-201ENST00000261037 SF3B3Q15393 1217 aaKnown RBP12.61□□□□□ -0.39
COL8A1-201ENST00000261037 STX19Q8N4C7 294 aa12.61□□□□□ -0.39
COL8A1-201ENST00000261037 FAM151AQ8WW52 585 aa12.61□□□□□ -0.39
COL8A1-201ENST00000261037 SEC16BQ96JE7 1060 aa12.61□□□□□ -0.39
COL8A1-201ENST00000261037 ZIM3Q96PE6 472 aa12.61□□□□□ -0.39
COL8A1-201ENST00000261037 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.61□□□□□ -0.39
COL8A1-201ENST00000261037 EFCAB14O75071 495 aa12.61□□□□□ -0.39
COL8A1-201ENST00000261037 FDPSP14324 419 aaKnown RBP12.61□□□□□ -0.39
COL8A1-201ENST00000261037 PLOD1Q02809 727 aaPredicted RBP12.61□□□□□ -0.39
COL8A1-201ENST00000261037 ITPK1Q13572 414 aa12.61□□□□□ -0.39
COL8A1-201ENST00000261037 NBPF20Q3BBV1 942 aa12.61□□□□□ -0.39
COL8A1-201ENST00000261037 NOTUMQ6P988 496 aa12.61□□□□□ -0.39
COL8A1-201ENST00000261037 CCNI2Q6ZMN8 369 aaPredicted RBP12.61□□□□□ -0.39
COL8A1-201ENST00000261037 XPO6Q96QU8 1125 aaKnown RBP12.61□□□□□ -0.39
COL8A1-201ENST00000261037 DIP2BQ9P265 1576 aa12.61□□□□□ -0.39
COL8A1-201ENST00000261037 TBX20Q9UMR3 447 aa12.61□□□□□ -0.39
COL8A1-201ENST00000261037 CPS1P31327 1500 aa12.61□□□□□ -0.39
COL8A1-201ENST00000261037 SSU72P8A0A1W2PR75 194 aa12.61□□□□□ -0.39
COL8A1-201ENST00000261037 PMPCBO75439 489 aa12.61□□□□□ -0.39
COL8A1-201ENST00000261037 PTPN7P35236 360 aa12.61□□□□□ -0.39
COL8A1-201ENST00000261037 SPRP35270 261 aaPredicted RBP12.61□□□□□ -0.39
COL8A1-201ENST00000261037 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.61□□□□□ -0.39
COL8A1-201ENST00000261037 TFB1MQ8WVM0 346 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms