RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 PLD5Q8N7P1 536 aa6.09□□□□□ -1.43
TOPBP1-201ENST00000260810 RNF149Q8NC42 400 aa6.09□□□□□ -1.43
TOPBP1-201ENST00000260810 FAF2Q96CS3 445 aa6.09□□□□□ -1.43
TOPBP1-201ENST00000260810 SMOC2Q9H3U7 446 aa6.09□□□□□ -1.43
TOPBP1-201ENST00000260810 RAB21Q9UL25 225 aa6.09□□□□□ -1.43
TOPBP1-201ENST00000260810 NUP214P35658 2090 aaPredicted RBP6.09□□□□□ -1.43
TOPBP1-201ENST00000260810 DYNC1LI2O43237 492 aaPredicted RBP6.09□□□□□ -1.43
TOPBP1-201ENST00000260810 WEE2P0C1S8 567 aa6.09□□□□□ -1.43
TOPBP1-201ENST00000260810 RFC1P35251 1148 aaPredicted RBP6.09□□□□□ -1.43
TOPBP1-201ENST00000260810 METAP1P53582 386 aa6.09□□□□□ -1.43
TOPBP1-201ENST00000260810 MAMLD1Q13495 774 aa6.09□□□□□ -1.43
TOPBP1-201ENST00000260810 DEFB115Q30KQ5 88 aa6.09□□□□□ -1.43
TOPBP1-201ENST00000260810 ODR4Q5SWX8 454 aa6.09□□□□□ -1.43
TOPBP1-201ENST00000260810 IQSEC1Q6DN90 963 aa6.09□□□□□ -1.43
TOPBP1-201ENST00000260810 CCDC148Q8NFR7 591 aa6.09□□□□□ -1.43
TOPBP1-201ENST00000260810 FAM213AQ9BRX8 229 aa6.09□□□□□ -1.43
TOPBP1-201ENST00000260810 ST3GAL5Q9UNP4 418 aa6.09□□□□□ -1.43
TOPBP1-201ENST00000260810 PHLPP2Q6ZVD8 1323 aa6.09□□□□□ -1.43
TOPBP1-201ENST00000260810 SMIM35A0A1B0GVV1 85 aa6.09□□□□□ -1.44
TOPBP1-201ENST00000260810 H3BQV1 296 aa6.09□□□□□ -1.44
TOPBP1-201ENST00000260810 CYP26A1O43174 497 aa6.09□□□□□ -1.44
TOPBP1-201ENST00000260810 RRM1P23921 792 aa6.09□□□□□ -1.44
TOPBP1-201ENST00000260810 CXCR5P32302 372 aa6.09□□□□□ -1.44
TOPBP1-201ENST00000260810 FKBP3Q00688 224 aaKnown RBP6.09□□□□□ -1.44
TOPBP1-201ENST00000260810 MFSD10Q14728 455 aa6.09□□□□□ -1.44
TOPBP1-201ENST00000260810 FASTKD3Q14CZ7 662 aaKnown RBP6.09□□□□□ -1.44
TOPBP1-201ENST00000260810 IFFO2Q5TF58 517 aa6.09□□□□□ -1.44
TOPBP1-201ENST00000260810 SLFN12Q8IYM2 578 aa6.09□□□□□ -1.44
TOPBP1-201ENST00000260810 PGBD5Q8N414 524 aa6.09□□□□□ -1.44
TOPBP1-201ENST00000260810 CD320Q9NPF0 282 aa6.09□□□□□ -1.44
TOPBP1-201ENST00000260810 GDAP2Q9NXN4 497 aa6.09□□□□□ -1.44
TOPBP1-201ENST00000260810 KLK14Q9P0G3 267 aa6.09□□□□□ -1.44
TOPBP1-201ENST00000260810 GAPDHSO14556 408 aaPredicted RBP6.08□□□□□ -1.44
TOPBP1-201ENST00000260810 PPP1R12BO60237 982 aaPredicted RBP6.08□□□□□ -1.44
TOPBP1-201ENST00000260810 DGAT1O75907 488 aa6.08□□□□□ -1.44
TOPBP1-201ENST00000260810 OR4Q2P0C623 313 aa6.08□□□□□ -1.44
TOPBP1-201ENST00000260810 GRIA1P42261 906 aa6.08□□□□□ -1.44
TOPBP1-201ENST00000260810 ADAM9Q13443 819 aa6.08□□□□□ -1.44
TOPBP1-201ENST00000260810 CYP26C1Q6V0L0 522 aa6.08□□□□□ -1.44
TOPBP1-201ENST00000260810 MCRS1Q96EZ8 462 aa6.08□□□□□ -1.44
TOPBP1-201ENST00000260810 FUT8Q9BYC5 575 aa6.08□□□□□ -1.44
TOPBP1-201ENST00000260810 TSPYL2Q9H2G4 693 aaPredicted RBP6.08□□□□□ -1.44
TOPBP1-201ENST00000260810 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.08□□□□□ -1.44
TOPBP1-201ENST00000260810 ERVK-11Q9UQG0 969 aa6.08□□□□□ -1.44
TOPBP1-201ENST00000260810 COL7A1Q02388 2944 aa6.08□□□□□ -1.44
TOPBP1-201ENST00000260810 A0A0U1RQF3 1178 aa6.08□□□□□ -1.44
TOPBP1-201ENST00000260810 STAM2O75886 525 aa6.08□□□□□ -1.44
TOPBP1-201ENST00000260810 CYP1A2P05177 515 aa6.08□□□□□ -1.44
TOPBP1-201ENST00000260810 PECAM1P16284 738 aaPredicted RBP6.08□□□□□ -1.44
TOPBP1-201ENST00000260810 CDKN3Q16667 212 aa6.08□□□□□ -1.44
TOPBP1-201ENST00000260810 CCDC178Q5BJE1 867 aa6.08□□□□□ -1.44
TOPBP1-201ENST00000260810 HAUS3Q68CZ6 603 aa6.08□□□□□ -1.44
TOPBP1-201ENST00000260810 DENND5AQ6IQ26 1287 aa6.08□□□□□ -1.44
TOPBP1-201ENST00000260810 PDCL2Q8N4E4 241 aa6.08□□□□□ -1.44
TOPBP1-201ENST00000260810 ACSF2Q96CM8 615 aaPredicted RBP6.08□□□□□ -1.44
TOPBP1-201ENST00000260810 SAGE1Q9NXZ1 904 aa6.08□□□□□ -1.44
TOPBP1-201ENST00000260810 KCND2Q9NZV8 630 aa6.08□□□□□ -1.44
TOPBP1-201ENST00000260810 KANSL3Q9P2N6 904 aa6.08□□□□□ -1.44
TOPBP1-201ENST00000260810 TRIM24O15164 1050 aa6.08□□□□□ -1.44
TOPBP1-201ENST00000260810 CACNG3O60359 315 aa6.08□□□□□ -1.44
TOPBP1-201ENST00000260810 RDXP35241 583 aaKnown RBP6.08□□□□□ -1.44
TOPBP1-201ENST00000260810 MAP2K2P36507 400 aa6.08□□□□□ -1.44
TOPBP1-201ENST00000260810 KRT76Q01546 638 aa6.08□□□□□ -1.44
TOPBP1-201ENST00000260810 DRAP1Q14919 205 aaPredicted RBP6.08□□□□□ -1.44
TOPBP1-201ENST00000260810 SART3Q15020 963 aaKnown RBP6.08□□□□□ -1.44
TOPBP1-201ENST00000260810 TRIM60Q495X7 471 aa6.08□□□□□ -1.44
TOPBP1-201ENST00000260810 C9orf57Q5W0N0 161 aa6.08□□□□□ -1.44
TOPBP1-201ENST00000260810 CLEC20AQ6ZU45 233 aa6.08□□□□□ -1.44
TOPBP1-201ENST00000260810 ARHGAP12Q8IWW6 846 aa6.08□□□□□ -1.44
TOPBP1-201ENST00000260810 CYP4X1Q8N118 509 aa6.08□□□□□ -1.44
TOPBP1-201ENST00000260810 CSGALNACT2Q8N6G5 542 aa6.08□□□□□ -1.44
TOPBP1-201ENST00000260810 BICD2Q8TD16 824 aa6.08□□□□□ -1.44
TOPBP1-201ENST00000260810 FAM212AQ96EL1 285 aa6.08□□□□□ -1.44
TOPBP1-201ENST00000260810 NRDE2Q9H7Z3 1164 aa6.08□□□□□ -1.44
TOPBP1-201ENST00000260810 RGS18Q9NS28 235 aa6.08□□□□□ -1.44
TOPBP1-201ENST00000260810 TMEM191CA6NGB0 347 aa6.08□□□□□ -1.44
TOPBP1-201ENST00000260810 TMEM191BP0C7N4 346 aa6.08□□□□□ -1.44
TOPBP1-201ENST00000260810 VAV1P15498 845 aa6.08□□□□□ -1.44
TOPBP1-201ENST00000260810 MTMR3Q13615 1198 aa6.08□□□□□ -1.44
TOPBP1-201ENST00000260810 BEND6Q5SZJ8 279 aaPredicted RBP6.08□□□□□ -1.44
TOPBP1-201ENST00000260810 SLC39A5Q6ZMH5 540 aa6.08□□□□□ -1.44
TOPBP1-201ENST00000260810 ANKRD35Q8N283 1001 aa6.08□□□□□ -1.44
TOPBP1-201ENST00000260810 CNTD1Q8N815 330 aa6.08□□□□□ -1.44
TOPBP1-201ENST00000260810 EHBP1Q8NDI1 1231 aa6.08□□□□□ -1.44
TOPBP1-201ENST00000260810 RDM1Q8NG50 284 aa6.08□□□□□ -1.44
TOPBP1-201ENST00000260810 TPCN2Q8NHX9 752 aa6.08□□□□□ -1.44
TOPBP1-201ENST00000260810 CLP1Q92989 425 aaKnown RBP6.08□□□□□ -1.44
TOPBP1-201ENST00000260810 ZSWIM3Q96MP5 696 aa6.08□□□□□ -1.44
TOPBP1-201ENST00000260810 OLFM3Q96PB7 478 aa6.08□□□□□ -1.44
TOPBP1-201ENST00000260810 TNFRSF12AQ9NP84 129 aa6.08□□□□□ -1.44
TOPBP1-201ENST00000260810 CACNA1HO95180 2353 aa6.08□□□□□ -1.44
TOPBP1-201ENST00000260810 HIDE1A8MVS5 230 aa6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 TOM1L1O75674 476 aa6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 ETS1P14921 441 aa6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 EEF1GP26641 437 aaKnown RBP6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 CD68P34810 354 aaPredicted RBP6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 SLC18A3Q16572 532 aa6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 METTL13Q8N6R0 699 aa6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 ST13P5Q8NFI4 369 aaPredicted RBP6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 ZNF606Q8WXB4 792 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms