RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 GLUD2P49448 558 aa16.85■□□□□ 0.29
CCDC90B-201ENST00000260054 DSG1Q02413 1049 aa16.85■□□□□ 0.29
CCDC90B-201ENST00000260054 ARID5BQ14865 1188 aa16.85■□□□□ 0.29
CCDC90B-201ENST00000260054 PRPF38BQ5VTL8 546 aaKnown RBP16.85■□□□□ 0.29
CCDC90B-201ENST00000260054 PRSS55Q6UWB4 352 aaPredicted RBP16.85■□□□□ 0.29
CCDC90B-201ENST00000260054 CNGA4Q8IV77 575 aa16.85■□□□□ 0.29
CCDC90B-201ENST00000260054 OR10T2Q8NGX3 314 aa16.85■□□□□ 0.29
CCDC90B-201ENST00000260054 LNX1Q8TBB1 728 aaPredicted RBP16.85■□□□□ 0.29
CCDC90B-201ENST00000260054 RIN2Q8WYP3 895 aaPredicted RBP16.85■□□□□ 0.29
CCDC90B-201ENST00000260054 DNAJC7Q99615 494 aa16.85■□□□□ 0.29
CCDC90B-201ENST00000260054 NT5C1AQ9BXI3 368 aa16.85■□□□□ 0.29
CCDC90B-201ENST00000260054 ZBP1Q9H171 429 aa16.85■□□□□ 0.29
CCDC90B-201ENST00000260054 ABHD10Q9NUJ1 306 aa16.85■□□□□ 0.29
CCDC90B-201ENST00000260054 LZTS1Q9Y250 596 aa16.85■□□□□ 0.29
CCDC90B-201ENST00000260054 TRIOBPQ9H2D6 2365 aa16.85■□□□□ 0.29
CCDC90B-201ENST00000260054 C2CD2LO14523 706 aa16.85■□□□□ 0.29
CCDC90B-201ENST00000260054 PSMC1P62191 440 aaKnown RBP16.85■□□□□ 0.29
CCDC90B-201ENST00000260054 ARID5AQ03989 594 aa16.85■□□□□ 0.29
CCDC90B-201ENST00000260054 CCDC142Q17RM4 750 aa16.85■□□□□ 0.29
CCDC90B-201ENST00000260054 SFMBT2Q5VUG0 894 aa16.85■□□□□ 0.29
CCDC90B-201ENST00000260054 KIAA1841Q6NSI8 718 aa16.85■□□□□ 0.29
CCDC90B-201ENST00000260054 ACOT1Q86TX2 421 aa16.85■□□□□ 0.29
CCDC90B-201ENST00000260054 FBXO22Q8NEZ5 403 aa16.85■□□□□ 0.29
CCDC90B-201ENST00000260054 OR8K1Q8NGG5 319 aa16.85■□□□□ 0.29
CCDC90B-201ENST00000260054 POF1BQ8WVV4 589 aa16.85■□□□□ 0.29
CCDC90B-201ENST00000260054 AUTS2Q8WXX7 1259 aa16.85■□□□□ 0.29
CCDC90B-201ENST00000260054 PIK3R5Q8WYR1 880 aa16.85■□□□□ 0.29
CCDC90B-201ENST00000260054 TMEM176AQ96HP8 235 aa16.85■□□□□ 0.29
CCDC90B-201ENST00000260054 TMEM209Q96SK2 561 aa16.85■□□□□ 0.29
CCDC90B-201ENST00000260054 LPIN3Q9BQK8 851 aa16.85■□□□□ 0.29
CCDC90B-201ENST00000260054 AIPL1Q9NZN9 384 aa16.85■□□□□ 0.29
CCDC90B-201ENST00000260054 STK39Q9UEW8 545 aa16.85■□□□□ 0.29
CCDC90B-201ENST00000260054 PUF60Q9UHX1 559 aaKnown RBP16.85■□□□□ 0.29
CCDC90B-201ENST00000260054 CDH23Q9H251 3354 aa16.84■□□□□ 0.29
CCDC90B-201ENST00000260054 H3BNC9 293 aa16.84■□□□□ 0.29
CCDC90B-201ENST00000260054 GRM6O15303 877 aa16.84■□□□□ 0.29
CCDC90B-201ENST00000260054 TBC1D4O60343 1298 aa16.84■□□□□ 0.29
CCDC90B-201ENST00000260054 ATP2C2O75185 946 aa16.84■□□□□ 0.29
CCDC90B-201ENST00000260054 CTXN3Q4LDR2 81 aa16.84■□□□□ 0.29
CCDC90B-201ENST00000260054 ZNF280DQ6N043 979 aa16.84■□□□□ 0.29
CCDC90B-201ENST00000260054 RSPO2Q6UXX9 243 aaPredicted RBP16.84■□□□□ 0.29
CCDC90B-201ENST00000260054 ANKS3Q6ZW76 656 aa16.84■□□□□ 0.29
CCDC90B-201ENST00000260054 IRF2BP2Q7Z5L9 587 aa16.84■□□□□ 0.29
CCDC90B-201ENST00000260054 SLC47A2Q86VL8 602 aa16.84■□□□□ 0.29
CCDC90B-201ENST00000260054 THEM5Q8N1Q8 247 aa16.84■□□□□ 0.29
CCDC90B-201ENST00000260054 ARNTL2Q8WYA1 636 aa16.84■□□□□ 0.29
CCDC90B-201ENST00000260054 ACBD6Q9BR61 282 aa16.84■□□□□ 0.29
CCDC90B-201ENST00000260054 NUCKS1Q9H1E3 243 aaKnown RBP16.84■□□□□ 0.29
CCDC90B-201ENST00000260054 EPOPA6NHQ4 379 aa16.83■□□□□ 0.28
CCDC90B-201ENST00000260054 URODP06132 367 aa16.83■□□□□ 0.28
CCDC90B-201ENST00000260054 PAEPP09466 180 aa16.83■□□□□ 0.28
CCDC90B-201ENST00000260054 OR4Q2P0C623 313 aa16.83■□□□□ 0.28
CCDC90B-201ENST00000260054 CTSAP10619 480 aa16.83■□□□□ 0.28
CCDC90B-201ENST00000260054 FERP16591 822 aa16.83■□□□□ 0.28
CCDC90B-201ENST00000260054 PCSK1P29120 753 aa16.83■□□□□ 0.28
CCDC90B-201ENST00000260054 HNRNPH3P31942 346 aaKnown RBP16.83■□□□□ 0.28
CCDC90B-201ENST00000260054 ERVFC1P60507 584 aa16.83■□□□□ 0.28
CCDC90B-201ENST00000260054 UBE3AQ05086 875 aa16.83■□□□□ 0.28
CCDC90B-201ENST00000260054 GPM6BQ13491 265 aa16.83■□□□□ 0.28
CCDC90B-201ENST00000260054 CAMK1Q14012 370 aa16.83■□□□□ 0.28
CCDC90B-201ENST00000260054 PSMD5Q16401 504 aa16.83■□□□□ 0.28
CCDC90B-201ENST00000260054 ASIC2Q16515 512 aa16.83■□□□□ 0.28
CCDC90B-201ENST00000260054 SMYD5Q6GMV2 418 aa16.83■□□□□ 0.28
CCDC90B-201ENST00000260054 CCDC186Q7Z3E2 898 aa16.83■□□□□ 0.28
CCDC90B-201ENST00000260054 CRYBG2Q8N1P7 616 aa16.83■□□□□ 0.28
CCDC90B-201ENST00000260054 SYN2Q92777 582 aaPredicted RBP16.83■□□□□ 0.28
CCDC90B-201ENST00000260054 SYT15Q9BQS2 421 aa16.83■□□□□ 0.28
CCDC90B-201ENST00000260054 ZSWIM1Q9BR11 485 aa16.83■□□□□ 0.28
CCDC90B-201ENST00000260054 CRTAC1Q9NQ79 661 aa16.83■□□□□ 0.28
CCDC90B-201ENST00000260054 MTRRQ9UBK8 725 aa16.83■□□□□ 0.28
CCDC90B-201ENST00000260054 CDH9Q9ULB4 789 aa16.83■□□□□ 0.28
CCDC90B-201ENST00000260054 GOLGA6L6A8MZA4 724 aa16.82■□□□□ 0.28
CCDC90B-201ENST00000260054 H7C4K7 107 aa16.82■□□□□ 0.28
CCDC90B-201ENST00000260054 LILRB3O75022 631 aa16.82■□□□□ 0.28
CCDC90B-201ENST00000260054 CSPG5O95196 566 aa16.82■□□□□ 0.28
CCDC90B-201ENST00000260054 CYP11B1P15538 503 aa16.82■□□□□ 0.28
CCDC90B-201ENST00000260054 RPL17P18621 184 aaKnown RBP16.82■□□□□ 0.28
CCDC90B-201ENST00000260054 PTPN14Q15678 1187 aa16.82■□□□□ 0.28
CCDC90B-201ENST00000260054 INTS6LQ5JSJ4 861 aaKnown RBP16.82■□□□□ 0.28
CCDC90B-201ENST00000260054 WDR59Q6PJI9 974 aa16.82■□□□□ 0.28
CCDC90B-201ENST00000260054 TMC7Q7Z402 723 aa16.82■□□□□ 0.28
CCDC90B-201ENST00000260054 LRRTM3Q86VH5 581 aa16.82■□□□□ 0.28
CCDC90B-201ENST00000260054 C12orf29Q8N999 325 aa16.82■□□□□ 0.28
CCDC90B-201ENST00000260054 B3GALNT2Q8NCR0 500 aa16.82■□□□□ 0.28
CCDC90B-201ENST00000260054 EPS8L1Q8TE68 723 aa16.82■□□□□ 0.28
CCDC90B-201ENST00000260054 TFAP2BQ92481 460 aa16.82■□□□□ 0.28
CCDC90B-201ENST00000260054 TNIP3Q96KP6 325 aa16.82■□□□□ 0.28
CCDC90B-201ENST00000260054 PKMYT1Q99640 499 aa16.82■□□□□ 0.28
CCDC90B-201ENST00000260054 TCF25Q9BQ70 676 aa16.82■□□□□ 0.28
CCDC90B-201ENST00000260054 TLR9Q9NR96 1032 aa16.82■□□□□ 0.28
CCDC90B-201ENST00000260054 MRPL17Q9NRX2 175 aaKnown RBP16.82■□□□□ 0.28
CCDC90B-201ENST00000260054 BACE2Q9Y5Z0 518 aa16.82■□□□□ 0.28
CCDC90B-201ENST00000260054 MYBPHLA2RUH7 354 aa16.81■□□□□ 0.28
CCDC90B-201ENST00000260054 ADAM12O43184 909 aa16.81■□□□□ 0.28
CCDC90B-201ENST00000260054 SKILP12757 684 aa16.81■□□□□ 0.28
CCDC90B-201ENST00000260054 CD19P15391 556 aa16.81■□□□□ 0.28
CCDC90B-201ENST00000260054 PTPN1P18031 435 aaKnown RBP16.81■□□□□ 0.28
CCDC90B-201ENST00000260054 BRD2P25440 801 aaKnown RBP16.81■□□□□ 0.28
CCDC90B-201ENST00000260054 GNA15P30679 374 aa16.81■□□□□ 0.28
CCDC90B-201ENST00000260054 CDR1P51861 262 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms