RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 THEM5Q8N1Q8 247 aa16.62■□□□□ 0.25
GYPC-201ENST00000259254 SP7Q8TDD2 431 aaPredicted RBP16.62■□□□□ 0.25
GYPC-201ENST00000259254 TMEM176AQ96HP8 235 aa16.62■□□□□ 0.25
GYPC-201ENST00000259254 IGSF21Q96ID5 467 aa16.62■□□□□ 0.25
GYPC-201ENST00000259254 HEXIM2Q96MH2 286 aaKnown RBP16.62■□□□□ 0.25
GYPC-201ENST00000259254 TWNKQ96RR1 684 aa16.62■□□□□ 0.25
GYPC-201ENST00000259254 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.62■□□□□ 0.25
GYPC-201ENST00000259254 GPR62Q9BZJ7 368 aa16.62■□□□□ 0.25
GYPC-201ENST00000259254 PDCL3Q9H2J4 239 aa16.62■□□□□ 0.25
GYPC-201ENST00000259254 ACP6Q9NPH0 428 aa16.62■□□□□ 0.25
GYPC-201ENST00000259254 SEPT11Q9NVA2 429 aaKnown RBP16.62■□□□□ 0.25
GYPC-201ENST00000259254 DDX43Q9NXZ2 648 aaKnown RBP16.62■□□□□ 0.25
GYPC-201ENST00000259254 CNTN6Q9UQ52 1028 aa16.62■□□□□ 0.25
GYPC-201ENST00000259254 BZW2Q9Y6E2 419 aaKnown RBP16.62■□□□□ 0.25
GYPC-201ENST00000259254 COL4A6Q14031 1691 aa16.62■□□□□ 0.25
GYPC-201ENST00000259254 SYN3O14994 580 aa16.61■□□□□ 0.25
GYPC-201ENST00000259254 HCRTO43612 131 aa16.61■□□□□ 0.25
GYPC-201ENST00000259254 CA3P07451 260 aa16.61■□□□□ 0.25
GYPC-201ENST00000259254 PAEPP09466 180 aa16.61■□□□□ 0.25
GYPC-201ENST00000259254 CYP11B1P15538 503 aa16.61■□□□□ 0.25
GYPC-201ENST00000259254 ACAT1P24752 427 aaKnown RBP16.61■□□□□ 0.25
GYPC-201ENST00000259254 CTNNB1P35222 781 aa16.61■□□□□ 0.25
GYPC-201ENST00000259254 EIF4A3P38919 411 aaKnown RBP16.61■□□□□ 0.25
GYPC-201ENST00000259254 PRKCIP41743 596 aa16.61■□□□□ 0.25
GYPC-201ENST00000259254 ZNF132P52740 706 aa16.61■□□□□ 0.25
GYPC-201ENST00000259254 RAD23BP54727 409 aa16.61■□□□□ 0.25
GYPC-201ENST00000259254 YWHAHQ04917 246 aaPredicted RBP16.61■□□□□ 0.25
GYPC-201ENST00000259254 SMYD5Q6GMV2 418 aa16.61■□□□□ 0.25
GYPC-201ENST00000259254 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.61■□□□□ 0.25
GYPC-201ENST00000259254 ACOT1Q86TX2 421 aa16.61■□□□□ 0.25
GYPC-201ENST00000259254 VPS36Q86VN1 386 aa16.61■□□□□ 0.25
GYPC-201ENST00000259254 WHAMMQ8TF30 809 aa16.61■□□□□ 0.25
GYPC-201ENST00000259254 TNIP3Q96KP6 325 aa16.61■□□□□ 0.25
GYPC-201ENST00000259254 CCDC42Q96M95 316 aa16.61■□□□□ 0.25
GYPC-201ENST00000259254 CHP1Q99653 195 aa16.61■□□□□ 0.25
GYPC-201ENST00000259254 ARHGAP20Q9P2F6 1191 aa16.61■□□□□ 0.25
GYPC-201ENST00000259254 COL4A4P53420 1690 aaPredicted RBP16.61■□□□□ 0.25
GYPC-201ENST00000259254 CHD9Q3L8U1 2897 aa16.6■□□□□ 0.25
GYPC-201ENST00000259254 SOWAHDA6NJG2 315 aa16.6■□□□□ 0.25
GYPC-201ENST00000259254 AKR1B10O60218 316 aa16.6■□□□□ 0.25
GYPC-201ENST00000259254 CYP11A1P05108 521 aa16.6■□□□□ 0.25
GYPC-201ENST00000259254 PLEKP08567 350 aaPredicted RBP16.6■□□□□ 0.25
GYPC-201ENST00000259254 TNFAIP3P21580 790 aa16.6■□□□□ 0.25
GYPC-201ENST00000259254 BRD2P25440 801 aaKnown RBP16.6■□□□□ 0.25
GYPC-201ENST00000259254 LMO2P25791 158 aa16.6■□□□□ 0.25
GYPC-201ENST00000259254 PCSK1P29120 753 aa16.6■□□□□ 0.25
GYPC-201ENST00000259254 PSMC1P62191 440 aaKnown RBP16.6■□□□□ 0.25
GYPC-201ENST00000259254 CDK17Q00537 523 aa16.6■□□□□ 0.25
GYPC-201ENST00000259254 KRT17Q04695 432 aa16.6■□□□□ 0.25
GYPC-201ENST00000259254 ADGRE1Q14246 886 aa16.6■□□□□ 0.25
GYPC-201ENST00000259254 HGSNATQ68CP4 663 aa16.6■□□□□ 0.25
GYPC-201ENST00000259254 KIAA1841Q6NSI8 718 aa16.6■□□□□ 0.25
GYPC-201ENST00000259254 NOP9Q86U38 636 aaKnown RBP16.6■□□□□ 0.25
GYPC-201ENST00000259254 SLC4A11Q8NBS3 891 aa16.6■□□□□ 0.25
GYPC-201ENST00000259254 SPATA18Q8TC71 538 aa16.6■□□□□ 0.25
GYPC-201ENST00000259254 EPS8L1Q8TE68 723 aa16.6■□□□□ 0.25
GYPC-201ENST00000259254 SLC20A1Q8WUM9 679 aa16.6■□□□□ 0.25
GYPC-201ENST00000259254 B3GALT6Q96L58 329 aa16.6■□□□□ 0.25
GYPC-201ENST00000259254 AGPAT1Q99943 283 aa16.6■□□□□ 0.25
GYPC-201ENST00000259254 DPEP3Q9H4B8 488 aa16.6■□□□□ 0.25
GYPC-201ENST00000259254 NHEJ1Q9H9Q4 299 aaPredicted RBP16.6■□□□□ 0.25
GYPC-201ENST00000259254 PDCD11Q14690 1871 aaKnown RBP16.6■□□□□ 0.25
GYPC-201ENST00000259254 LINC01553A4QN01 128 aa16.59■□□□□ 0.25
GYPC-201ENST00000259254 GABRDO14764 452 aa16.59■□□□□ 0.25
GYPC-201ENST00000259254 MED7O43513 233 aa16.59■□□□□ 0.25
GYPC-201ENST00000259254 FGFR3P22607 806 aa16.59■□□□□ 0.25
GYPC-201ENST00000259254 FECHP22830 423 aa16.59■□□□□ 0.25
GYPC-201ENST00000259254 CYLC1P35663 651 aaPredicted RBP16.59■□□□□ 0.25
GYPC-201ENST00000259254 CCZ1BP86790 482 aa16.59■□□□□ 0.25
GYPC-201ENST00000259254 CCZ1P86791 482 aaPredicted RBP16.59■□□□□ 0.25
GYPC-201ENST00000259254 USP41Q3LFD5 358 aa16.59■□□□□ 0.25
GYPC-201ENST00000259254 SGO2Q562F6 1265 aa16.59■□□□□ 0.25
GYPC-201ENST00000259254 VARS2Q5ST30 1063 aaKnown RBP16.59■□□□□ 0.25
GYPC-201ENST00000259254 TAS1R1Q7RTX1 841 aa16.59■□□□□ 0.25
GYPC-201ENST00000259254 ZNF571Q7Z3V5 609 aaPredicted RBP16.59■□□□□ 0.25
GYPC-201ENST00000259254 TMEM139Q8IV31 216 aa16.59■□□□□ 0.25
GYPC-201ENST00000259254 CLP1Q92989 425 aaKnown RBP16.59■□□□□ 0.25
GYPC-201ENST00000259254 SYT15Q9BQS2 421 aa16.59■□□□□ 0.25
GYPC-201ENST00000259254 TTPALQ9BTX7 342 aa16.59■□□□□ 0.25
GYPC-201ENST00000259254 KCNF1Q9H3M0 494 aa16.59■□□□□ 0.25
GYPC-201ENST00000259254 FAM49BQ9NUQ9 324 aa16.59■□□□□ 0.25
GYPC-201ENST00000259254 NOCTQ9UK39 431 aaKnown RBP16.59■□□□□ 0.25
GYPC-201ENST00000259254 KIAA1257Q9ULG3 409 aa16.59■□□□□ 0.25
GYPC-201ENST00000259254 RWDD3Q9Y3V2 267 aa16.59■□□□□ 0.25
GYPC-201ENST00000259254 NME7Q9Y5B8 376 aa16.59■□□□□ 0.25
GYPC-201ENST00000259254 SSU72P8A0A1W2PR75 194 aa16.58■□□□□ 0.24
GYPC-201ENST00000259254 H7C4K7 107 aa16.58■□□□□ 0.24
GYPC-201ENST00000259254 ARHGAP6O43182 974 aa16.58■□□□□ 0.24
GYPC-201ENST00000259254 FGF18O76093 207 aa16.58■□□□□ 0.24
GYPC-201ENST00000259254 ARHGEF15O94989 841 aa16.58■□□□□ 0.24
GYPC-201ENST00000259254 VDRP11473 427 aa16.58■□□□□ 0.24
GYPC-201ENST00000259254 SSTR3P32745 418 aaPredicted RBP16.58■□□□□ 0.24
GYPC-201ENST00000259254 BMPR1AP36894 532 aa16.58■□□□□ 0.24
GYPC-201ENST00000259254 TSPY1Q01534 308 aa16.58■□□□□ 0.24
GYPC-201ENST00000259254 CDR2Q01850 454 aa16.58■□□□□ 0.24
GYPC-201ENST00000259254 TAP1Q03518 808 aa16.58■□□□□ 0.24
GYPC-201ENST00000259254 CTXN3Q4LDR2 81 aa16.58■□□□□ 0.24
GYPC-201ENST00000259254 RTP2Q5QGT7 225 aa16.58■□□□□ 0.24
GYPC-201ENST00000259254 ZNF280DQ6N043 979 aa16.58■□□□□ 0.24
GYPC-201ENST00000259254 ZNF677Q86XU0 584 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms