RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 SKIV2L2P42285 1042 aaKnown RBP12.93□□□□□ -0.34
USP30-201ENST00000257548 GALK1P51570 392 aa12.93□□□□□ -0.34
USP30-201ENST00000257548 SHROOM1Q2M3G4 852 aaPredicted RBP12.93□□□□□ -0.34
USP30-201ENST00000257548 EML3Q32P44 896 aa12.93□□□□□ -0.34
USP30-201ENST00000257548 MAP7D1Q3KQU3 841 aa12.93□□□□□ -0.34
USP30-201ENST00000257548 SPDYCQ5MJ68 293 aa12.93□□□□□ -0.34
USP30-201ENST00000257548 MYLK4Q86YV6 388 aaPredicted RBP12.93□□□□□ -0.34
USP30-201ENST00000257548 NDUFAF2Q8N183 169 aa12.93□□□□□ -0.34
USP30-201ENST00000257548 TJP1Q07157 1748 aa12.93□□□□□ -0.34
USP30-201ENST00000257548 COL4A1P02462 1669 aa12.93□□□□□ -0.34
USP30-201ENST00000257548 A6NHS1 94 aa12.93□□□□□ -0.34
USP30-201ENST00000257548 PIK3CDO00329 1044 aa12.93□□□□□ -0.34
USP30-201ENST00000257548 MCF2LO15068 1137 aa12.93□□□□□ -0.34
USP30-201ENST00000257548 PPP1R11O60927 126 aaPredicted RBP12.93□□□□□ -0.34
USP30-201ENST00000257548 GH2P01242 217 aa12.93□□□□□ -0.34
USP30-201ENST00000257548 ANPEPP15144 967 aa12.93□□□□□ -0.34
USP30-201ENST00000257548 PSMA2P25787 234 aa12.93□□□□□ -0.34
USP30-201ENST00000257548 SOX10P56693 466 aa12.93□□□□□ -0.34
USP30-201ENST00000257548 TRPC3Q13507 836 aa12.93□□□□□ -0.34
USP30-201ENST00000257548 KLHL38Q2WGJ6 581 aa12.93□□□□□ -0.34
USP30-201ENST00000257548 SEZ6Q53EL9 994 aa12.93□□□□□ -0.34
USP30-201ENST00000257548 PLA2G4FQ68DD2 849 aa12.93□□□□□ -0.34
USP30-201ENST00000257548 ATP2A3Q93084 1043 aa12.93□□□□□ -0.34
USP30-201ENST00000257548 PRR11Q96HE9 360 aaPredicted RBP12.93□□□□□ -0.34
USP30-201ENST00000257548 ZNF668Q96K58 619 aaPredicted RBP12.93□□□□□ -0.34
USP30-201ENST00000257548 ANKRD27Q96NW4 1050 aa12.93□□□□□ -0.34
USP30-201ENST00000257548 PRPF18Q99633 342 aaKnown RBP12.93□□□□□ -0.34
USP30-201ENST00000257548 DMAP1Q9NPF5 467 aaPredicted RBP12.93□□□□□ -0.34
USP30-201ENST00000257548 WEE2P0C1S8 567 aa12.92□□□□□ -0.34
USP30-201ENST00000257548 EIF2AK2P19525 551 aaKnown RBP12.92□□□□□ -0.34
USP30-201ENST00000257548 IGBP1P78318 339 aa12.92□□□□□ -0.34
USP30-201ENST00000257548 ALCAMQ13740 583 aa12.92□□□□□ -0.34
USP30-201ENST00000257548 PPP6R3Q5H9R7 873 aaPredicted RBP12.92□□□□□ -0.34
USP30-201ENST00000257548 SYDE2Q5VT97 1194 aa12.92□□□□□ -0.34
USP30-201ENST00000257548 C1orf228Q6PIY5 440 aa12.92□□□□□ -0.34
USP30-201ENST00000257548 ANO5Q75V66 913 aa12.92□□□□□ -0.34
USP30-201ENST00000257548 ETNPPLQ8TBG4 499 aa12.92□□□□□ -0.34
USP30-201ENST00000257548 DTNBP1Q96EV8 351 aa12.92□□□□□ -0.34
USP30-201ENST00000257548 INPP5FQ9Y2H2 1132 aa12.92□□□□□ -0.34
USP30-201ENST00000257548 SPATA31A1Q5TZJ5 1347 aa12.92□□□□□ -0.34
USP30-201ENST00000257548 PROCP04070 461 aa12.92□□□□□ -0.34
USP30-201ENST00000257548 UBAP2LQ14157 1087 aaKnown RBP12.92□□□□□ -0.34
USP30-201ENST00000257548 ABCB5Q2M3G0 1257 aa12.92□□□□□ -0.34
USP30-201ENST00000257548 CNPY1Q3B7I2 92 aa12.92□□□□□ -0.34
USP30-201ENST00000257548 TMEM259Q4ZIN3 620 aa12.92□□□□□ -0.34
USP30-201ENST00000257548 LIN52Q52LA3 116 aa12.92□□□□□ -0.34
USP30-201ENST00000257548 COBLL1Q53SF7 1204 aa12.92□□□□□ -0.34
USP30-201ENST00000257548 ACAD10Q6JQN1 1059 aa12.92□□□□□ -0.34
USP30-201ENST00000257548 MFSD7Q6UXD7 560 aa12.92□□□□□ -0.34
USP30-201ENST00000257548 PCGF5Q86SE9 256 aa12.92□□□□□ -0.34
USP30-201ENST00000257548 SEPT12Q8IYM1 358 aa12.92□□□□□ -0.34
USP30-201ENST00000257548 GLIS1Q8NBF1 620 aa12.92□□□□□ -0.34
USP30-201ENST00000257548 E2F7Q96AV8 911 aa12.92□□□□□ -0.34
USP30-201ENST00000257548 ZNF395Q9H8N7 513 aaPredicted RBP12.92□□□□□ -0.34
USP30-201ENST00000257548 SLC9A2Q9UBY0 812 aa12.92□□□□□ -0.34
USP30-201ENST00000257548 TBC1D12O60347 775 aa12.92□□□□□ -0.34
USP30-201ENST00000257548 OR6B1O95007 311 aa12.92□□□□□ -0.34
USP30-201ENST00000257548 FGRP09769 529 aa12.92□□□□□ -0.34
USP30-201ENST00000257548 SPATA31C1P0DKV0 1188 aa12.92□□□□□ -0.34
USP30-201ENST00000257548 PRELPP51888 382 aa12.92□□□□□ -0.34
USP30-201ENST00000257548 CYP4A22Q5TCH4 519 aa12.92□□□□□ -0.34
USP30-201ENST00000257548 SATL1Q86VE3 508 aa12.92□□□□□ -0.34
USP30-201ENST00000257548 RBM15BQ8NDT2 890 aaKnown RBP12.92□□□□□ -0.34
USP30-201ENST00000257548 SLC7A6OSQ96CW6 309 aaPredicted RBP12.92□□□□□ -0.34
USP30-201ENST00000257548 CEP170P1Q96L14 293 aa12.92□□□□□ -0.34
USP30-201ENST00000257548 SIKE1Q9BRV8 207 aa12.92□□□□□ -0.34
USP30-201ENST00000257548 DCUN1D5Q9BTE7 237 aa12.92□□□□□ -0.34
USP30-201ENST00000257548 VPS11Q9H270 941 aa12.92□□□□□ -0.34
USP30-201ENST00000257548 RAB6BQ9NRW1 208 aa12.92□□□□□ -0.34
USP30-201ENST00000257548 NWD2Q9ULI1 1742 aa12.92□□□□□ -0.34
USP30-201ENST00000257548 PEX6Q13608 980 aa12.91□□□□□ -0.34
USP30-201ENST00000257548 LBRQ14739 615 aaKnown RBP12.91□□□□□ -0.34
USP30-201ENST00000257548 POLNQ7Z5Q5 900 aa12.91□□□□□ -0.34
USP30-201ENST00000257548 CRAMP1Q96RY5 1269 aa12.91□□□□□ -0.34
USP30-201ENST00000257548 NUF2Q9BZD4 464 aa12.91□□□□□ -0.34
USP30-201ENST00000257548 LRRC19Q9H756 370 aa12.91□□□□□ -0.34
USP30-201ENST00000257548 CAAP1Q9H8G2 361 aa12.91□□□□□ -0.34
USP30-201ENST00000257548 DBNDD1Q9H9R9 158 aa12.91□□□□□ -0.34
USP30-201ENST00000257548 TTLL3Q9Y4R7 772 aa12.91□□□□□ -0.34
USP30-201ENST00000257548 MYH7P12883 1935 aa12.91□□□□□ -0.34
USP30-201ENST00000257548 HNRNPCL1O60812 293 aaKnown RBP12.91□□□□□ -0.34
USP30-201ENST00000257548 ASMTLO95671 621 aa12.91□□□□□ -0.34
USP30-201ENST00000257548 ENO3P13929 434 aaPredicted RBP12.91□□□□□ -0.34
USP30-201ENST00000257548 CCNB1P14635 433 aa12.91□□□□□ -0.34
USP30-201ENST00000257548 JAM2P57087 298 aa12.91□□□□□ -0.34
USP30-201ENST00000257548 FAAP100Q0VG06 881 aa12.91□□□□□ -0.34
USP30-201ENST00000257548 HADHQ16836 314 aaKnown RBP12.91□□□□□ -0.34
USP30-201ENST00000257548 SLC44A4Q53GD3 710 aa12.91□□□□□ -0.34
USP30-201ENST00000257548 TRIM67Q6ZTA4 783 aa12.91□□□□□ -0.34
USP30-201ENST00000257548 MARK2Q7KZI7 788 aaKnown RBP12.91□□□□□ -0.34
USP30-201ENST00000257548 GDPD5Q8WTR4 605 aa12.91□□□□□ -0.34
USP30-201ENST00000257548 MRPL1Q9BYD6 325 aaKnown RBP12.91□□□□□ -0.34
USP30-201ENST00000257548 MMADHCQ9H3L0 296 aaPredicted RBP12.91□□□□□ -0.34
USP30-201ENST00000257548 DNAJC5Q9H3Z4 198 aa12.91□□□□□ -0.34
USP30-201ENST00000257548 PIH1D1Q9NWS0 290 aaKnown RBP12.91□□□□□ -0.34
USP30-201ENST00000257548 GTPBP10A4D1E9 387 aaKnown RBP12.91□□□□□ -0.34
USP30-201ENST00000257548 C2CD2LO14523 706 aa12.91□□□□□ -0.34
USP30-201ENST00000257548 STX3Q13277 289 aa12.91□□□□□ -0.34
USP30-201ENST00000257548 AP3B2Q13367 1082 aa12.91□□□□□ -0.34
USP30-201ENST00000257548 CYLC2Q14093 348 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms