RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 PAX3P23760 479 aa10.05□□□□□ -0.8
NIP7-202ENST00000254941 SSTR3P32745 418 aaPredicted RBP10.05□□□□□ -0.8
NIP7-202ENST00000254941 CYP2C18P33260 490 aa10.05□□□□□ -0.8
NIP7-202ENST00000254941 CCL23P55773 120 aa10.05□□□□□ -0.8
NIP7-202ENST00000254941 ORC1Q13415 861 aa10.05□□□□□ -0.8
NIP7-202ENST00000254941 CNGA2Q16280 664 aa10.05□□□□□ -0.8
NIP7-202ENST00000254941 LRRC26Q2I0M4 334 aa10.05□□□□□ -0.8
NIP7-202ENST00000254941 SGO2Q562F6 1265 aa10.05□□□□□ -0.8
NIP7-202ENST00000254941 PAPD7Q5XG87 772 aaKnown RBP10.05□□□□□ -0.8
NIP7-202ENST00000254941 NECAB2Q7Z6G3 386 aa10.05□□□□□ -0.8
NIP7-202ENST00000254941 CRIPAKQ8N1N5 446 aa10.05□□□□□ -0.8
NIP7-202ENST00000254941 LRRC57Q8N9N7 239 aa10.05□□□□□ -0.8
NIP7-202ENST00000254941 TMEM35BQ8NCS4 154 aa10.05□□□□□ -0.8
NIP7-202ENST00000254941 C3orf58Q8NDZ4 430 aa10.05□□□□□ -0.8
NIP7-202ENST00000254941 TRIM11Q96F44 468 aa10.05□□□□□ -0.8
NIP7-202ENST00000254941 HEXIM2Q96MH2 286 aaKnown RBP10.05□□□□□ -0.8
NIP7-202ENST00000254941 UROC1Q96N76 676 aa10.05□□□□□ -0.8
NIP7-202ENST00000254941 PAAF1Q9BRP4 392 aa10.05□□□□□ -0.8
NIP7-202ENST00000254941 TMEM106CQ9BVX2 250 aa10.05□□□□□ -0.8
NIP7-202ENST00000254941 OSGEPQ9NPF4 335 aa10.05□□□□□ -0.8
NIP7-202ENST00000254941 KANSL3Q9P2N6 904 aa10.05□□□□□ -0.8
NIP7-202ENST00000254941 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.05□□□□□ -0.8
NIP7-202ENST00000254941 INPP5FQ9Y2H2 1132 aa10.05□□□□□ -0.8
NIP7-202ENST00000254941 CEP83Q9Y592 693 aa10.05□□□□□ -0.8
NIP7-202ENST00000254941 NME7Q9Y5B8 376 aa10.05□□□□□ -0.8
NIP7-202ENST00000254941 FAM170AA1A519 330 aa10.04□□□□□ -0.8
NIP7-202ENST00000254941 O00370 1275 aa10.04□□□□□ -0.8
NIP7-202ENST00000254941 CYB561D2O14569 222 aa10.04□□□□□ -0.8
NIP7-202ENST00000254941 RIOK3O14730 519 aaKnown RBP10.04□□□□□ -0.8
NIP7-202ENST00000254941 ATP1A1P05023 1023 aaKnown RBP10.04□□□□□ -0.8
NIP7-202ENST00000254941 FGFR1P11362 822 aa10.04□□□□□ -0.8
NIP7-202ENST00000254941 MMP8P22894 467 aa10.04□□□□□ -0.8
NIP7-202ENST00000254941 WARSP23381 471 aaKnown RBP10.04□□□□□ -0.8
NIP7-202ENST00000254941 IGFBP6P24592 240 aaPredicted RBP10.04□□□□□ -0.8
NIP7-202ENST00000254941 GNL1P36915 607 aaPredicted RBP10.04□□□□□ -0.8
NIP7-202ENST00000254941 AMPD2Q01433 879 aa10.04□□□□□ -0.8
NIP7-202ENST00000254941 PTP4A2Q12974 167 aa10.04□□□□□ -0.8
NIP7-202ENST00000254941 TUBB2AQ13885 445 aa10.04□□□□□ -0.8
NIP7-202ENST00000254941 STILQ15468 1287 aa10.04□□□□□ -0.8
NIP7-202ENST00000254941 TCTN1Q2MV58 587 aa10.04□□□□□ -0.8
NIP7-202ENST00000254941 NOMO2Q5JPE7 1267 aa10.04□□□□□ -0.8
NIP7-202ENST00000254941 SLFN11Q7Z7L1 901 aa10.04□□□□□ -0.8
NIP7-202ENST00000254941 ADGRF2Q8IZF7 708 aa10.04□□□□□ -0.8
NIP7-202ENST00000254941 CRYBG2Q8N1P7 616 aa10.04□□□□□ -0.8
NIP7-202ENST00000254941 PDCL2Q8N4E4 241 aa10.04□□□□□ -0.8
NIP7-202ENST00000254941 WDTC1Q8N5D0 677 aa10.04□□□□□ -0.8
NIP7-202ENST00000254941 OR6B3Q8NGW1 331 aa10.04□□□□□ -0.8
NIP7-202ENST00000254941 ZNF653Q96CK0 615 aa10.04□□□□□ -0.8
NIP7-202ENST00000254941 SENP8Q96LD8 212 aa10.04□□□□□ -0.8
NIP7-202ENST00000254941 TUBB2BQ9BVA1 445 aa10.04□□□□□ -0.8
NIP7-202ENST00000254941 AVENQ9NQS1 362 aaPredicted RBP10.04□□□□□ -0.8
NIP7-202ENST00000254941 TMEM39AQ9NV64 488 aa10.04□□□□□ -0.8
NIP7-202ENST00000254941 COG5Q9UP83 839 aa10.04□□□□□ -0.8
NIP7-202ENST00000254941 STXBP5LQ9Y2K9 1186 aa10.04□□□□□ -0.8
NIP7-202ENST00000254941 MRFAP1Q9Y605 127 aa10.04□□□□□ -0.8
NIP7-202ENST00000254941 A8MXQ7 604 aa10.04□□□□□ -0.8
NIP7-202ENST00000254941 GABRDO14764 452 aa10.04□□□□□ -0.8
NIP7-202ENST00000254941 B3GAT3O94766 335 aa10.04□□□□□ -0.8
NIP7-202ENST00000254941 LMO2P25791 158 aa10.04□□□□□ -0.8
NIP7-202ENST00000254941 DSC1Q08554 894 aa10.04□□□□□ -0.8
NIP7-202ENST00000254941 LCLAT1Q6UWP7 414 aa10.04□□□□□ -0.8
NIP7-202ENST00000254941 ACOT1Q86TX2 421 aa10.04□□□□□ -0.8
NIP7-202ENST00000254941 SYCE1Q8N0S2 351 aa10.04□□□□□ -0.8
NIP7-202ENST00000254941 C12orf29Q8N999 325 aa10.04□□□□□ -0.8
NIP7-202ENST00000254941 URGCPQ8TCY9 931 aa10.04□□□□□ -0.8
NIP7-202ENST00000254941 DNAI2Q9GZS0 605 aa10.04□□□□□ -0.8
NIP7-202ENST00000254941 SNX25Q9H3E2 840 aa10.04□□□□□ -0.8
NIP7-202ENST00000254941 ADAM22Q9P0K1 906 aa10.04□□□□□ -0.8
NIP7-202ENST00000254941 CTTNBP2NLQ9P2B4 639 aa10.04□□□□□ -0.8
NIP7-202ENST00000254941 UVRAGQ9P2Y5 699 aa10.04□□□□□ -0.8
NIP7-202ENST00000254941 CNOT8Q9UFF9 292 aaKnown RBP10.04□□□□□ -0.8
NIP7-202ENST00000254941 PCDHB7Q9Y5E2 793 aa10.04□□□□□ -0.8
NIP7-202ENST00000254941 ALPK3Q96L96 1907 aa10.03□□□□□ -0.8
NIP7-202ENST00000254941 VWA8A3KMH1 1905 aa10.03□□□□□ -0.8
NIP7-202ENST00000254941 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.03□□□□□ -0.8
NIP7-202ENST00000254941 ATMINO43313 823 aaPredicted RBP10.03□□□□□ -0.8
NIP7-202ENST00000254941 BUB1BO60566 1050 aaPredicted RBP10.03□□□□□ -0.8
NIP7-202ENST00000254941 MICAL2O94851 1124 aa10.03□□□□□ -0.8
NIP7-202ENST00000254941 PRLRP16471 622 aa10.03□□□□□ -0.8
NIP7-202ENST00000254941 RRM1P23921 792 aa10.03□□□□□ -0.8
NIP7-202ENST00000254941 RFC2P35250 354 aa10.03□□□□□ -0.8
NIP7-202ENST00000254941 TIGD5Q53EQ6 642 aa10.03□□□□□ -0.8
NIP7-202ENST00000254941 MEI1Q5TIA1 1274 aa10.03□□□□□ -0.8
NIP7-202ENST00000254941 WSCD1Q658N2 575 aa10.03□□□□□ -0.8
NIP7-202ENST00000254941 DENND1BQ6P3S1 775 aa10.03□□□□□ -0.8
NIP7-202ENST00000254941 DCLRE1AQ6PJP8 1040 aa10.03□□□□□ -0.8
NIP7-202ENST00000254941 MMS22LQ6ZRQ5 1243 aa10.03□□□□□ -0.8
NIP7-202ENST00000254941 DEFB128Q7Z7B8 93 aa10.03□□□□□ -0.8
NIP7-202ENST00000254941 TMEM86AQ8N2M4 240 aa10.03□□□□□ -0.8
NIP7-202ENST00000254941 C1orf131Q8NDD1 294 aaKnown RBP10.03□□□□□ -0.8
NIP7-202ENST00000254941 RSPH1Q8WYR4 309 aa10.03□□□□□ -0.8
NIP7-202ENST00000254941 RABGGTAQ92696 567 aa10.03□□□□□ -0.8
NIP7-202ENST00000254941 VWCEQ96DN2 955 aa10.03□□□□□ -0.8
NIP7-202ENST00000254941 TNIP3Q96KP6 325 aa10.03□□□□□ -0.8
NIP7-202ENST00000254941 C11orf70Q9BRQ4 267 aa10.03□□□□□ -0.8
NIP7-202ENST00000254941 NUP85Q9BW27 656 aa10.03□□□□□ -0.8
NIP7-202ENST00000254941 TLR10Q9BXR5 811 aa10.03□□□□□ -0.8
NIP7-202ENST00000254941 ABCB6Q9NP58 842 aa10.03□□□□□ -0.8
NIP7-202ENST00000254941 TBC1D13Q9NVG8 400 aa10.03□□□□□ -0.8
NIP7-202ENST00000254941 CDC23Q9UJX2 597 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms