RNA–Protein interactions for RNA: ENST00000253048.9

ZC3H4-201, Transcript of zinc finger CCCH-type containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ZC3H4, Length 6,119 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4-201ENST00000253048 NRBF2Q96F24 287 aa14.98□□□□□ -0.01
ZC3H4-201ENST00000253048 PNKPQ96T60 521 aa14.98□□□□□ -0.01
ZC3H4-201ENST00000253048 AGPAT1Q99943 283 aa14.98□□□□□ -0.01
ZC3H4-201ENST00000253048 NIF3L1Q9GZT8 377 aa14.98□□□□□ -0.01
ZC3H4-201ENST00000253048 ABCG4Q9H172 646 aa14.98□□□□□ -0.01
ZC3H4-201ENST00000253048 TUT1Q9H6E5 874 aaKnown RBP14.98□□□□□ -0.01
ZC3H4-201ENST00000253048 VPS9D1Q9Y2B5 631 aa14.98□□□□□ -0.01
ZC3H4-201ENST00000253048 DYRK1BQ9Y463 629 aa14.98□□□□□ -0.01
ZC3H4-201ENST00000253048 NDUFA10O95299 355 aa14.97□□□□□ -0.01
ZC3H4-201ENST00000253048 WEE2P0C1S8 567 aa14.97□□□□□ -0.01
ZC3H4-201ENST00000253048 GARTP22102 1010 aa14.97□□□□□ -0.01
ZC3H4-201ENST00000253048 GEMIN4P57678 1058 aaKnown RBP14.97□□□□□ -0.01
ZC3H4-201ENST00000253048 GRIN1Q05586 938 aa14.97□□□□□ -0.01
ZC3H4-201ENST00000253048 HLA-DQA1Q5Y7H0 255 aa14.97□□□□□ -0.01
ZC3H4-201ENST00000253048 LRRC8AQ8IWT6 810 aa14.97□□□□□ -0.01
ZC3H4-201ENST00000253048 KRT78Q8N1N4 520 aa14.97□□□□□ -0.01
ZC3H4-201ENST00000253048 SAMD3Q8N6K7 520 aa14.97□□□□□ -0.01
ZC3H4-201ENST00000253048 CCDC197Q8NCU1 140 aa14.97□□□□□ -0.01
ZC3H4-201ENST00000253048 ASCC2Q9H1I8 757 aaPredicted RBP14.97□□□□□ -0.01
ZC3H4-201ENST00000253048 RFX7Q2KHR2 1363 aa14.97□□□□□ -0.01
ZC3H4-201ENST00000253048 PP2D1A8MPX8 630 aa14.97□□□□□ -0.01
ZC3H4-201ENST00000253048 RHOBTB1O94844 696 aa14.97□□□□□ -0.01
ZC3H4-201ENST00000253048 KITP10721 976 aa14.97□□□□□ -0.01
ZC3H4-201ENST00000253048 SLC1A1P43005 524 aa14.97□□□□□ -0.01
ZC3H4-201ENST00000253048 THOP1P52888 689 aa14.97□□□□□ -0.01
ZC3H4-201ENST00000253048 KCTD16Q68DU8 428 aa14.97□□□□□ -0.01
ZC3H4-201ENST00000253048 TRIM68Q6AZZ1 485 aa14.97□□□□□ -0.01
ZC3H4-201ENST00000253048 UBE2OQ9C0C9 1292 aaKnown RBP14.97□□□□□ -0.01
ZC3H4-201ENST00000253048 BRD8Q9H0E9 1235 aa14.97□□□□□ -0.01
ZC3H4-201ENST00000253048 SPASTQ9UBP0 616 aa14.97□□□□□ -0.01
ZC3H4-201ENST00000253048 P4HA2O15460 535 aa14.97□□□□□ -0.01
ZC3H4-201ENST00000253048 SNRPFP62306 86 aaKnown RBP14.97□□□□□ -0.01
ZC3H4-201ENST00000253048 UGP2Q16851 508 aa14.97□□□□□ -0.01
ZC3H4-201ENST00000253048 SPIRE2Q8WWL2 714 aa14.97□□□□□ -0.01
ZC3H4-201ENST00000253048 FAR2Q96K12 515 aa14.97□□□□□ -0.01
ZC3H4-201ENST00000253048 ADCY10Q96PN6 1610 aa14.97□□□□□ -0.01
ZC3H4-201ENST00000253048 MLNP12872 115 aa14.97□□□□□ -0.01
ZC3H4-201ENST00000253048 TOMM20Q15388 145 aa14.97□□□□□ -0.01
ZC3H4-201ENST00000253048 FAM47EQ6ZV65 393 aa14.97□□□□□ -0.01
ZC3H4-201ENST00000253048 RCOR2Q8IZ40 523 aa14.97□□□□□ -0.01
ZC3H4-201ENST00000253048 CPA5Q8WXQ8 436 aa14.97□□□□□ -0.01
ZC3H4-201ENST00000253048 JADE3Q92613 823 aa14.97□□□□□ -0.01
ZC3H4-201ENST00000253048 ZNF512BQ96KM6 892 aaPredicted RBP14.97□□□□□ -0.01
ZC3H4-201ENST00000253048 MCEEQ96PE7 176 aa14.97□□□□□ -0.01
ZC3H4-201ENST00000253048 NMRK1Q9NWW6 199 aa14.97□□□□□ -0.01
ZC3H4-201ENST00000253048 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.97□□□□□ -0.01
ZC3H4-201ENST00000253048 PITPNM2Q9BZ72 1349 aa14.97□□□□□ -0.01
ZC3H4-201ENST00000253048 HLA-DRAP01903 254 aa14.96□□□□□ -0.01
ZC3H4-201ENST00000253048 DSG3P32926 999 aa14.96□□□□□ -0.01
ZC3H4-201ENST00000253048 ADCY2Q08462 1091 aa14.96□□□□□ -0.01
ZC3H4-201ENST00000253048 CACUL1Q86Y37 369 aa14.96□□□□□ -0.01
ZC3H4-201ENST00000253048 CLYBLQ8N0X4 340 aa14.96□□□□□ -0.01
ZC3H4-201ENST00000253048 ACER1Q8TDN7 264 aa14.96□□□□□ -0.01
ZC3H4-201ENST00000253048 AASDHPPTQ9NRN7 309 aa14.96□□□□□ -0.01
ZC3H4-201ENST00000253048 FBXO28Q9NVF7 368 aa14.96□□□□□ -0.01
ZC3H4-201ENST00000253048 DDIT4Q9NX09 232 aa14.96□□□□□ -0.01
ZC3H4-201ENST00000253048 RCOR1Q9UKL0 485 aa14.96□□□□□ -0.01
ZC3H4-201ENST00000253048 COPG1Q9Y678 874 aaKnown RBP14.96□□□□□ -0.01
ZC3H4-201ENST00000253048 RTN2O75298 545 aa14.96□□□□□ -0.01
ZC3H4-201ENST00000253048 TRADDQ15628 312 aa14.96□□□□□ -0.01
ZC3H4-201ENST00000253048 C6orf118Q5T5N4 469 aa14.96□□□□□ -0.01
ZC3H4-201ENST00000253048 MPZL3Q6UWV2 235 aa14.96□□□□□ -0.01
ZC3H4-201ENST00000253048 REEP2Q9BRK0 252 aa14.96□□□□□ -0.01
ZC3H4-201ENST00000253048 JMJD4Q9H9V9 463 aa14.96□□□□□ -0.01
ZC3H4-201ENST00000253048 SOWAHDA6NJG2 315 aa14.96□□□□□ -0.01
ZC3H4-201ENST00000253048 PDZK1P1A8MUH7 402 aa14.96□□□□□ -0.01
ZC3H4-201ENST00000253048 SLC9A3R1O14745 358 aaPredicted RBP14.96□□□□□ -0.01
ZC3H4-201ENST00000253048 HIF1AQ16665 826 aa14.96□□□□□ -0.01
ZC3H4-201ENST00000253048 DNAJC1Q96KC8 554 aaKnown RBP14.96□□□□□ -0.01
ZC3H4-201ENST00000253048 TXLNGQ9NUQ3 528 aa14.96□□□□□ -0.01
ZC3H4-201ENST00000253048 GTF2E2P29084 291 aaKnown RBP14.96□□□□□ -0.01
ZC3H4-201ENST00000253048 NPEPPSP55786 919 aa14.96□□□□□ -0.01
ZC3H4-201ENST00000253048 LRRC23Q53EV4 343 aaPredicted RBP14.96□□□□□ -0.01
ZC3H4-201ENST00000253048 FAM180AQ6UWF9 173 aa14.96□□□□□ -0.01
ZC3H4-201ENST00000253048 MTSS1LQ765P7 747 aa14.96□□□□□ -0.01
ZC3H4-201ENST00000253048 PALB2Q86YC2 1186 aa14.96□□□□□ -0.01
ZC3H4-201ENST00000253048 ERLEC1Q96DZ1 483 aa14.96□□□□□ -0.01
ZC3H4-201ENST00000253048 TARS2Q9BW92 718 aaKnown RBP14.96□□□□□ -0.01
ZC3H4-201ENST00000253048 M0QYT0 321 aa14.96□□□□□ -0.02
ZC3H4-201ENST00000253048 MTA2O94776 668 aa14.96□□□□□ -0.02
ZC3H4-201ENST00000253048 ESRRAP11474 423 aaPredicted RBP14.96□□□□□ -0.02
ZC3H4-201ENST00000253048 PRCPP42785 496 aa14.96□□□□□ -0.02
ZC3H4-201ENST00000253048 CENPCQ03188 943 aa14.96□□□□□ -0.02
ZC3H4-201ENST00000253048 SLC20A1Q8WUM9 679 aa14.96□□□□□ -0.02
ZC3H4-201ENST00000253048 BTBD6Q96KE9 485 aa14.96□□□□□ -0.02
ZC3H4-201ENST00000253048 RNPC3Q96LT9 517 aaKnown RBP14.96□□□□□ -0.02
ZC3H4-201ENST00000253048 PRPF18Q99633 342 aaKnown RBP14.96□□□□□ -0.02
ZC3H4-201ENST00000253048 MRPS23Q9Y3D9 190 aaKnown RBP14.96□□□□□ -0.02
ZC3H4-201ENST00000253048 POLR2EP19388 210 aaKnown RBP14.95□□□□□ -0.02
ZC3H4-201ENST00000253048 ANXA11P50995 505 aaKnown RBP14.95□□□□□ -0.02
ZC3H4-201ENST00000253048 PTK6Q13882 451 aa14.95□□□□□ -0.02
ZC3H4-201ENST00000253048 PIGHQ14442 188 aaPredicted RBP14.95□□□□□ -0.02
ZC3H4-201ENST00000253048 GJC2Q5T442 439 aaPredicted RBP14.95□□□□□ -0.02
ZC3H4-201ENST00000253048 H2AFY2Q9P0M6 372 aaPredicted RBP14.95□□□□□ -0.02
ZC3H4-201ENST00000253048 LIMA1Q9UHB6 759 aaKnown RBP14.95□□□□□ -0.02
ZC3H4-201ENST00000253048 CDC23Q9UJX2 597 aa14.95□□□□□ -0.02
ZC3H4-201ENST00000253048 CCDC188H7C350 402 aa14.95□□□□□ -0.02
ZC3H4-201ENST00000253048 KRT8P05787 483 aa14.95□□□□□ -0.02
ZC3H4-201ENST00000253048 FGFR1P11362 822 aa14.95□□□□□ -0.02
ZC3H4-201ENST00000253048 HALP42357 657 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms