RNA–Protein interactions for RNA: ENST00000252699.6

ACTN4-201, Transcript of actinin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTN4, Length 4,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-201ENST00000252699 LBX2Q6XYB7 198 aa17.87■□□□□ 0.45
ACTN4-201ENST00000252699 CFAP61Q8NHU2 1237 aa17.87■□□□□ 0.45
ACTN4-201ENST00000252699 TPX2Q9ULW0 747 aaKnown RBP17.87■□□□□ 0.45
ACTN4-201ENST00000252699 UGCGQ16739 394 aa17.87■□□□□ 0.45
ACTN4-201ENST00000252699 CLEC16AQ2KHT3 1053 aa17.87■□□□□ 0.45
ACTN4-201ENST00000252699 MMEL1Q495T6 779 aa17.87■□□□□ 0.45
ACTN4-201ENST00000252699 PRAMEF19Q5SWL8 479 aa17.87■□□□□ 0.45
ACTN4-201ENST00000252699 ZNF410Q86VK4 478 aa17.87■□□□□ 0.45
ACTN4-201ENST00000252699 MTIF3Q9H2K0 278 aaKnown RBP17.87■□□□□ 0.45
ACTN4-201ENST00000252699 ITGA11Q9UKX5 1188 aa17.87■□□□□ 0.45
ACTN4-201ENST00000252699 A0A0A6YYK5 440 aaPredicted RBP17.87■□□□□ 0.45
ACTN4-201ENST00000252699 LSM8O95777 96 aaKnown RBP17.87■□□□□ 0.45
ACTN4-201ENST00000252699 THOC1Q96FV9 657 aaKnown RBP17.87■□□□□ 0.45
ACTN4-201ENST00000252699 DDIT4Q9NX09 232 aa17.87■□□□□ 0.45
ACTN4-201ENST00000252699 DCDC2CA8MYV0 355 aa17.87■□□□□ 0.45
ACTN4-201ENST00000252699 FKBP1BP68106 108 aa17.87■□□□□ 0.45
ACTN4-201ENST00000252699 PRAMEP78395 509 aa17.87■□□□□ 0.45
ACTN4-201ENST00000252699 CENPCQ03188 943 aa17.87■□□□□ 0.45
ACTN4-201ENST00000252699 ARSHQ5FYA8 562 aa17.87■□□□□ 0.45
ACTN4-201ENST00000252699 SLC15A5A6NIM6 579 aa17.86■□□□□ 0.45
ACTN4-201ENST00000252699 DDX3XO00571 662 aaKnown RBP eCLIP17.86■□□□□ 0.457e-32■□□□□ 8.2
ACTN4-201ENST00000252699 TRPA1O75762 1119 aa17.86■□□□□ 0.45
ACTN4-201ENST00000252699 ATN1P54259 1190 aaPredicted RBP17.86■□□□□ 0.45
ACTN4-201ENST00000252699 DLG4P78352 724 aa17.86■□□□□ 0.45
ACTN4-201ENST00000252699 KCNT1Q5JUK3 1230 aa17.86■□□□□ 0.45
ACTN4-201ENST00000252699 ANO5Q75V66 913 aa17.86■□□□□ 0.45
ACTN4-201ENST00000252699 GPR142Q7Z601 462 aa17.86■□□□□ 0.45
ACTN4-201ENST00000252699 MAML1Q92585 1016 aa17.86■□□□□ 0.45
ACTN4-201ENST00000252699 EXT2Q93063 718 aa17.86■□□□□ 0.45
ACTN4-201ENST00000252699 TMEM134Q9H6X4 195 aa17.86■□□□□ 0.45
ACTN4-201ENST00000252699 TRPC7Q9HCX4 862 aa17.86■□□□□ 0.45
ACTN4-201ENST00000252699 NID2Q14112 1375 aa17.86■□□□□ 0.45
ACTN4-201ENST00000252699 RGPD2P0DJD1 1756 aa17.86■□□□□ 0.45
ACTN4-201ENST00000252699 CCDC160A6NGH7 325 aa17.86■□□□□ 0.45
ACTN4-201ENST00000252699 PSTPIP1O43586 416 aa17.86■□□□□ 0.45
ACTN4-201ENST00000252699 ZNF189O75820 626 aaPredicted RBP17.86■□□□□ 0.45
ACTN4-201ENST00000252699 GHRP10912 638 aa17.86■□□□□ 0.45
ACTN4-201ENST00000252699 ALDH7A1P49419 539 aaKnown RBP17.86■□□□□ 0.45
ACTN4-201ENST00000252699 BFSP2Q13515 415 aa17.86■□□□□ 0.45
ACTN4-201ENST00000252699 MEA1Q16626 185 aa17.86■□□□□ 0.45
ACTN4-201ENST00000252699 KDELC2Q7Z4H8 507 aa17.86■□□□□ 0.45
ACTN4-201ENST00000252699 COLEC11Q9BWP8 271 aa17.86■□□□□ 0.45
ACTN4-201ENST00000252699 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.86■□□□□ 0.45
ACTN4-201ENST00000252699 LACTBL1A8MY62 500 aa17.86■□□□□ 0.45
ACTN4-201ENST00000252699 M0QYT0 321 aa17.86■□□□□ 0.45
ACTN4-201ENST00000252699 BCAT1P54687 386 aa17.86■□□□□ 0.45
ACTN4-201ENST00000252699 TRMT10CQ7L0Y3 403 aaKnown RBP17.86■□□□□ 0.45
ACTN4-201ENST00000252699 USP33Q8TEY7 942 aa17.86■□□□□ 0.45
ACTN4-201ENST00000252699 KLHL29Q96CT2 875 aa17.86■□□□□ 0.45
ACTN4-201ENST00000252699 CYTH2Q99418 400 aa17.86■□□□□ 0.45
ACTN4-201ENST00000252699 ISCUQ9H1K1 167 aa17.86■□□□□ 0.45
ACTN4-201ENST00000252699 VIPAS39Q9H9C1 493 aa17.86■□□□□ 0.45
ACTN4-201ENST00000252699 MTM1Q13496 603 aa17.86■□□□□ 0.45
ACTN4-201ENST00000252699 FAM133BQ5BKY9 247 aaKnown RBP17.86■□□□□ 0.45
ACTN4-201ENST00000252699 SH3TC2Q8TF17 1288 aa17.86■□□□□ 0.45
ACTN4-201ENST00000252699 RAPGEF5Q92565 580 aa17.86■□□□□ 0.45
ACTN4-201ENST00000252699 L3MBTL3Q96JM7 780 aaPredicted RBP17.86■□□□□ 0.45
ACTN4-201ENST00000252699 SLITRK1Q96PX8 696 aa17.86■□□□□ 0.45
ACTN4-201ENST00000252699 WDR70Q9NW82 654 aa17.86■□□□□ 0.45
ACTN4-201ENST00000252699 C3orf70A6NLC5 250 aaPredicted RBP17.85■□□□□ 0.45
ACTN4-201ENST00000252699 PROSCO94903 275 aa17.85■□□□□ 0.45
ACTN4-201ENST00000252699 NNMTP40261 264 aa17.85■□□□□ 0.45
ACTN4-201ENST00000252699 TSNAXIP1Q2TAA8 658 aa17.85■□□□□ 0.45
ACTN4-201ENST00000252699 EMC1Q8N766 993 aa17.85■□□□□ 0.45
ACTN4-201ENST00000252699 ZFATQ9P243 1243 aa17.85■□□□□ 0.45
ACTN4-201ENST00000252699 G3BP2Q9UN86 482 aaKnown RBP17.85■□□□□ 0.45
ACTN4-201ENST00000252699 STX1BP61266 288 aa17.85■□□□□ 0.45
ACTN4-201ENST00000252699 PDK1Q15118 436 aa17.85■□□□□ 0.45
ACTN4-201ENST00000252699 MIIPQ5JXC2 388 aa17.85■□□□□ 0.45
ACTN4-201ENST00000252699 ATPAF2Q8N5M1 289 aa17.85■□□□□ 0.45
ACTN4-201ENST00000252699 HASPINQ8TF76 798 aa17.85■□□□□ 0.45
ACTN4-201ENST00000252699 SCG3Q8WXD2 468 aaKnown RBP17.85■□□□□ 0.45
ACTN4-201ENST00000252699 KAT5Q92993 513 aa17.85■□□□□ 0.45
ACTN4-201ENST00000252699 PABPC5Q96DU9 382 aaKnown RBP17.85■□□□□ 0.45
ACTN4-201ENST00000252699 PAK5Q9P286 719 aa17.85■□□□□ 0.45
ACTN4-201ENST00000252699 GTF2A1P52655 376 aaPredicted RBP17.85■□□□□ 0.45
ACTN4-201ENST00000252699 LRRC14Q15048 493 aa17.85■□□□□ 0.45
ACTN4-201ENST00000252699 RGMBQ6NW40 437 aa17.85■□□□□ 0.45
ACTN4-201ENST00000252699 ATG4AQ8WYN0 398 aa17.85■□□□□ 0.45
ACTN4-201ENST00000252699 WNK4Q96J92 1243 aa17.85■□□□□ 0.45
ACTN4-201ENST00000252699 ADAM33Q9BZ11 813 aa17.85■□□□□ 0.45
ACTN4-201ENST00000252699 XPO7Q9UIA9 1087 aaKnown RBP17.85■□□□□ 0.45
ACTN4-201ENST00000252699 CASTOR2A6NHX0 329 aa17.84■□□□□ 0.45
ACTN4-201ENST00000252699 MAFO75444 373 aaPredicted RBP17.84■□□□□ 0.45
ACTN4-201ENST00000252699 FNTAP49354 379 aa17.84■□□□□ 0.45
ACTN4-201ENST00000252699 CDH8P55286 799 aa17.84■□□□□ 0.45
ACTN4-201ENST00000252699 NPY5RQ15761 445 aa17.84■□□□□ 0.45
ACTN4-201ENST00000252699 ACCSLQ4AC99 568 aa17.84■□□□□ 0.45
ACTN4-201ENST00000252699 CRLF3Q8IUI8 442 aa17.84■□□□□ 0.45
ACTN4-201ENST00000252699 ANKRD7Q92527 254 aa17.84■□□□□ 0.45
ACTN4-201ENST00000252699 TMEM169Q96HH4 297 aa17.84■□□□□ 0.45
ACTN4-201ENST00000252699 SLC13A1Q9BZW2 595 aa17.84■□□□□ 0.45
ACTN4-201ENST00000252699 BARX2Q9UMQ3 279 aaPredicted RBP17.84■□□□□ 0.45
ACTN4-201ENST00000252699 C2CD2LO14523 706 aa17.84■□□□□ 0.45
ACTN4-201ENST00000252699 NDST1P52848 882 aa17.84■□□□□ 0.45
ACTN4-201ENST00000252699 ITGA8P53708 1063 aa17.84■□□□□ 0.45
ACTN4-201ENST00000252699 MAPK7Q13164 816 aa17.84■□□□□ 0.45
ACTN4-201ENST00000252699 KYNUQ16719 465 aa17.84■□□□□ 0.45
ACTN4-201ENST00000252699 ZNF449Q6P9G9 518 aa17.84■□□□□ 0.45
ACTN4-201ENST00000252699 RMDN1Q96DB5 314 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms