RNA–Protein interactions for RNA: ENST00000252622.14

LSM7-201, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM7, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-201ENST00000252622 CDH7Q9ULB5 785 aa26.89■■□□□ 1.9
LSM7-201ENST00000252622 SORCS3Q9UPU3 1222 aa26.89■■□□□ 1.9
LSM7-201ENST00000252622 SLC27A5Q9Y2P5 690 aa26.89■■□□□ 1.9
LSM7-201ENST00000252622 TACC1O75410 805 aa26.88■■□□□ 1.89
LSM7-201ENST00000252622 VNN1O95497 513 aa26.88■■□□□ 1.89
LSM7-201ENST00000252622 EPB41P11171 864 aaKnown RBP26.88■■□□□ 1.89
LSM7-201ENST00000252622 LAMP2P13473 410 aa26.88■■□□□ 1.89
LSM7-201ENST00000252622 BMP6P22004 513 aa26.88■■□□□ 1.89
LSM7-201ENST00000252622 CCNE1P24864 410 aa26.88■■□□□ 1.89
LSM7-201ENST00000252622 ALDH1A3P47895 512 aa26.88■■□□□ 1.89
LSM7-201ENST00000252622 TUFMP49411 452 aaKnown RBP26.88■■□□□ 1.89
LSM7-201ENST00000252622 PMS1P54277 932 aaKnown RBP26.88■■□□□ 1.89
LSM7-201ENST00000252622 ZXDAP98168 799 aa26.88■■□□□ 1.89
LSM7-201ENST00000252622 FKBP3Q00688 224 aaKnown RBP26.88■■□□□ 1.89
LSM7-201ENST00000252622 ZNF699Q32M78 642 aa26.88■■□□□ 1.89
LSM7-201ENST00000252622 ANKRD40Q6AI12 368 aa26.88■■□□□ 1.89
LSM7-201ENST00000252622 ISM2Q6H9L7 571 aa26.88■■□□□ 1.89
LSM7-201ENST00000252622 SV2AQ7L0J3 742 aa26.88■■□□□ 1.89
LSM7-201ENST00000252622 TTC9BQ8N6N2 239 aa26.88■■□□□ 1.89
LSM7-201ENST00000252622 LEMD2Q8NC56 503 aa26.88■■□□□ 1.89
LSM7-201ENST00000252622 MMS19Q96T76 1030 aa26.88■■□□□ 1.89
LSM7-201ENST00000252622 PKMYT1Q99640 499 aa26.88■■□□□ 1.89
LSM7-201ENST00000252622 CORO1BQ9BR76 489 aa26.88■■□□□ 1.89
LSM7-201ENST00000252622 IGSF9Q9P2J2 1179 aa26.88■■□□□ 1.89
LSM7-201ENST00000252622 PCDHB5Q9Y5E4 795 aa26.88■■□□□ 1.89
LSM7-201ENST00000252622 DOCK8Q8NF50 2099 aa26.88■■□□□ 1.89
LSM7-201ENST00000252622 NOTCH4Q99466 2003 aa26.87■■□□□ 1.89
LSM7-201ENST00000252622 SLC16A3O15427 465 aaKnown RBP26.87■■□□□ 1.89
LSM7-201ENST00000252622 ASGR2P07307 311 aa26.87■■□□□ 1.89
LSM7-201ENST00000252622 CD44P16070 742 aaKnown RBP26.87■■□□□ 1.89
LSM7-201ENST00000252622 ACAT1P24752 427 aaKnown RBP26.87■■□□□ 1.89
LSM7-201ENST00000252622 EPHB3P54753 998 aa26.87■■□□□ 1.89
LSM7-201ENST00000252622 EPHA5P54756 1037 aa26.87■■□□□ 1.89
LSM7-201ENST00000252622 MTMR3Q13615 1198 aa26.87■■□□□ 1.89
LSM7-201ENST00000252622 PRSS36Q5K4E3 855 aa26.87■■□□□ 1.89
LSM7-201ENST00000252622 TRIML1Q8N9V2 468 aa26.87■■□□□ 1.89
LSM7-201ENST00000252622 ITFG1Q8TB96 612 aa26.87■■□□□ 1.89
LSM7-201ENST00000252622 FGF13Q92913 245 aa26.87■■□□□ 1.89
LSM7-201ENST00000252622 DNAJC25Q9H1X3 360 aa26.87■■□□□ 1.89
LSM7-201ENST00000252622 C11orf16Q9NQ32 467 aa26.87■■□□□ 1.89
LSM7-201ENST00000252622 TMLHEQ9NVH6 421 aa26.87■■□□□ 1.89
LSM7-201ENST00000252622 MRPS23Q9Y3D9 190 aaKnown RBP26.87■■□□□ 1.89
LSM7-201ENST00000252622 ASB3Q9Y575 518 aa26.87■■□□□ 1.89
LSM7-201ENST00000252622 DOCK6Q96HP0 2047 aa26.87■■□□□ 1.89
LSM7-201ENST00000252622 TRIM49BA6NDI0 452 aa26.86■■□□□ 1.89
LSM7-201ENST00000252622 GPR37L1O60883 481 aa26.86■■□□□ 1.89
LSM7-201ENST00000252622 MICAL2O94851 1124 aa26.86■■□□□ 1.89
LSM7-201ENST00000252622 TRIM49P0CI25 452 aa26.86■■□□□ 1.89
LSM7-201ENST00000252622 TRIM49CP0CI26 452 aa26.86■■□□□ 1.89
LSM7-201ENST00000252622 SLC5A9Q2M3M2 681 aa26.86■■□□□ 1.89
LSM7-201ENST00000252622 FOXR2Q6PJQ5 311 aa26.86■■□□□ 1.89
LSM7-201ENST00000252622 TAF4BQ92750 862 aa26.86■■□□□ 1.89
LSM7-201ENST00000252622 NXPE3Q969Y0 559 aa26.86■■□□□ 1.89
LSM7-201ENST00000252622 SEPT5Q99719 369 aaPredicted RBP26.86■■□□□ 1.89
LSM7-201ENST00000252622 KCNK12Q9HB15 430 aa26.86■■□□□ 1.89
LSM7-201ENST00000252622 ABCB6Q9NP58 842 aa26.86■■□□□ 1.89
LSM7-201ENST00000252622 ASAH2Q9NR71 780 aa26.86■■□□□ 1.89
LSM7-201ENST00000252622 ABI2Q9NYB9 513 aaPredicted RBP26.86■■□□□ 1.89
LSM7-201ENST00000252622 KIAA1468Q9P260 1216 aa26.86■■□□□ 1.89
LSM7-201ENST00000252622 CDH9Q9ULB4 789 aa26.86■■□□□ 1.89
LSM7-201ENST00000252622 PPP1R3GB7ZBB8 358 aa26.85■■□□□ 1.89
LSM7-201ENST00000252622 BIN1O00499 593 aa26.85■■□□□ 1.89
LSM7-201ENST00000252622 ZNF197O14709 1029 aa26.85■■□□□ 1.89
LSM7-201ENST00000252622 HAPLN1P10915 354 aaPredicted RBP26.85■■□□□ 1.89
LSM7-201ENST00000252622 GTF2H1P32780 548 aa26.85■■□□□ 1.89
LSM7-201ENST00000252622 PPP3CAQ08209 521 aa26.85■■□□□ 1.89
LSM7-201ENST00000252622 SGSM1Q2NKQ1 1148 aa26.85■■□□□ 1.89
LSM7-201ENST00000252622 MGAT5BQ3V5L5 792 aa26.85■■□□□ 1.89
LSM7-201ENST00000252622 ZNF667Q5HYK9 610 aa26.85■■□□□ 1.89
LSM7-201ENST00000252622 CYP4A22Q5TCH4 519 aa26.85■■□□□ 1.89
LSM7-201ENST00000252622 PDZD4Q76G19 769 aaPredicted RBP26.85■■□□□ 1.89
LSM7-201ENST00000252622 NPAS3Q8IXF0 933 aa26.85■■□□□ 1.89
LSM7-201ENST00000252622 UBALD2Q8IYN6 164 aa26.85■■□□□ 1.89
LSM7-201ENST00000252622 EEF2KMTQ96G04 330 aa26.85■■□□□ 1.89
LSM7-201ENST00000252622 GBP4Q96PP9 640 aa26.85■■□□□ 1.89
LSM7-201ENST00000252622 SYT15Q9BQS2 421 aa26.85■■□□□ 1.89
LSM7-201ENST00000252622 MRPL45Q9BRJ2 306 aaKnown RBP26.85■■□□□ 1.89
LSM7-201ENST00000252622 NXF1Q9UBU9 619 aaKnown RBP26.85■■□□□ 1.89
LSM7-201ENST00000252622 HCRTO43612 131 aa26.84■■□□□ 1.89
LSM7-201ENST00000252622 GCLMP48507 274 aa26.84■■□□□ 1.89
LSM7-201ENST00000252622 CAMK4Q16566 473 aa26.84■■□□□ 1.89
LSM7-201ENST00000252622 TMEM31Q5JXX7 168 aa26.84■■□□□ 1.89
LSM7-201ENST00000252622 FAM171BQ6P995 826 aa26.84■■□□□ 1.89
LSM7-201ENST00000252622 ITIH5Q86UX2 942 aa26.84■■□□□ 1.89
LSM7-201ENST00000252622 PSMG2Q969U7 264 aa26.84■■□□□ 1.89
LSM7-201ENST00000252622 SNX25Q9H3E2 840 aa26.84■■□□□ 1.89
LSM7-201ENST00000252622 TMEM8AQ9HCN3 771 aa26.84■■□□□ 1.89
LSM7-201ENST00000252622 GDE1Q9NZC3 331 aa26.84■■□□□ 1.89
LSM7-201ENST00000252622 GTF3C4Q9UKN8 822 aa26.84■■□□□ 1.89
LSM7-201ENST00000252622 ANHXE9PGG2 379 aa26.83■■□□□ 1.89
LSM7-201ENST00000252622 SOAT2O75908 522 aa26.83■■□□□ 1.89
LSM7-201ENST00000252622 ASS1P00966 412 aaKnown RBP26.83■■□□□ 1.89
LSM7-201ENST00000252622 HLA-DRAP01903 254 aa26.83■■□□□ 1.89
LSM7-201ENST00000252622 ATF6P18850 670 aa26.83■■□□□ 1.89
LSM7-201ENST00000252622 LMO2P25791 158 aa26.83■■□□□ 1.89
LSM7-201ENST00000252622 PIK3CAP42336 1068 aa26.83■■□□□ 1.89
LSM7-201ENST00000252622 HTR4Q13639 388 aa26.83■■□□□ 1.89
LSM7-201ENST00000252622 TMC8Q8IU68 726 aa26.83■■□□□ 1.89
LSM7-201ENST00000252622 HS6ST3Q8IZP7 471 aa26.83■■□□□ 1.89
LSM7-201ENST00000252622 FUBP3Q96I24 572 aaKnown RBP eCLIP26.83■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms