RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 CATSPERGQ6ZRH7 1159 aa19.99■□□□□ 0.79
SNX4-201ENST00000251775 RELL1Q8IUW5 271 aa19.99■□□□□ 0.79
SNX4-201ENST00000251775 CDHR1Q96JP9 859 aa19.99■□□□□ 0.79
SNX4-201ENST00000251775 C1orf112Q9NSG2 853 aa19.99■□□□□ 0.79
SNX4-201ENST00000251775 KCNG1Q9UIX4 513 aa19.99■□□□□ 0.79
SNX4-201ENST00000251775 ZC3H11AO75152 810 aaKnown RBP eCLIP19.98■□□□□ 0.79
SNX4-201ENST00000251775 ZBTB7AO95365 584 aa19.98■□□□□ 0.79
SNX4-201ENST00000251775 SUPT20HL2P0C7V6 817 aa19.98■□□□□ 0.79
SNX4-201ENST00000251775 MYBL1P10243 752 aa19.98■□□□□ 0.79
SNX4-201ENST00000251775 ALDH3A1P30838 453 aa19.98■□□□□ 0.79
SNX4-201ENST00000251775 NLRP11P59045 1033 aaKnown RBP19.98■□□□□ 0.79
SNX4-201ENST00000251775 ENPEPQ07075 957 aa19.98■□□□□ 0.79
SNX4-201ENST00000251775 EMC2Q15006 297 aa19.98■□□□□ 0.79
SNX4-201ENST00000251775 TSNAXIP1Q2TAA8 658 aa19.98■□□□□ 0.79
SNX4-201ENST00000251775 SUPT20HL1Q3ZLR7 823 aa19.98■□□□□ 0.79
SNX4-201ENST00000251775 XKR3Q5GH77 459 aa19.98■□□□□ 0.79
SNX4-201ENST00000251775 CWF19L1Q69YN2 538 aaKnown RBP19.98■□□□□ 0.79
SNX4-201ENST00000251775 ENOSF1Q7L5Y1 443 aa19.98■□□□□ 0.79
SNX4-201ENST00000251775 RIBC1Q8N443 379 aaPredicted RBP19.98■□□□□ 0.79
SNX4-201ENST00000251775 TMEM143Q96AN5 459 aa19.98■□□□□ 0.79
SNX4-201ENST00000251775 ATP2A1O14983 1001 aa19.98■□□□□ 0.79
SNX4-201ENST00000251775 ACOT2P49753 483 aa19.98■□□□□ 0.79
SNX4-201ENST00000251775 CLDN10P78369 228 aa19.98■□□□□ 0.79
SNX4-201ENST00000251775 FSTL1Q12841 308 aa19.98■□□□□ 0.79
SNX4-201ENST00000251775 SPARCL1Q14515 664 aa19.98■□□□□ 0.79
SNX4-201ENST00000251775 ANGEL2Q5VTE6 544 aaKnown RBP19.98■□□□□ 0.79
SNX4-201ENST00000251775 TMEM154Q6P9G4 183 aa19.98■□□□□ 0.79
SNX4-201ENST00000251775 APLFQ8IW19 511 aaPredicted RBP19.98■□□□□ 0.79
SNX4-201ENST00000251775 RBBP8NLQ8NC74 664 aaPredicted RBP19.98■□□□□ 0.79
SNX4-201ENST00000251775 ATL2Q8NHH9 583 aa19.98■□□□□ 0.79
SNX4-201ENST00000251775 TEKT4Q8WW24 435 aa19.98■□□□□ 0.79
SNX4-201ENST00000251775 FAM136AQ96C01 138 aa19.98■□□□□ 0.79
SNX4-201ENST00000251775 HAPLN2Q9GZV7 340 aa19.98■□□□□ 0.79
SNX4-201ENST00000251775 TLE6Q9H808 572 aa19.98■□□□□ 0.79
SNX4-201ENST00000251775 PIDD1Q9HB75 910 aa19.98■□□□□ 0.79
SNX4-201ENST00000251775 PTPRJQ12913 1337 aa19.98■□□□□ 0.79
SNX4-201ENST00000251775 C19orf81C9J6K1 198 aa19.97■□□□□ 0.79
SNX4-201ENST00000251775 PRPF4O43172 522 aaKnown RBP eCLIP19.97■□□□□ 0.791e-8■■■■■ 31.1
SNX4-201ENST00000251775 BAG6P46379 1132 aa19.97■□□□□ 0.79
SNX4-201ENST00000251775 RASSF2P50749 326 aa19.97■□□□□ 0.79
SNX4-201ENST00000251775 PSMD6Q15008 389 aa19.97■□□□□ 0.79
SNX4-201ENST00000251775 PDK4Q16654 411 aa19.97■□□□□ 0.79
SNX4-201ENST00000251775 SPOPLQ6IQ16 392 aa19.97■□□□□ 0.79
SNX4-201ENST00000251775 CYP4F22Q6NT55 531 aa19.97■□□□□ 0.79
SNX4-201ENST00000251775 LLGL2Q6P1M3 1020 aa19.97■□□□□ 0.79
SNX4-201ENST00000251775 PHLDB2Q86SQ0 1253 aa19.97■□□□□ 0.79
SNX4-201ENST00000251775 MCOLN2Q8IZK6 566 aa19.97■□□□□ 0.79
SNX4-201ENST00000251775 ANAPC7Q9UJX3 599 aa19.97■□□□□ 0.79
SNX4-201ENST00000251775 RPL26L1Q9UNX3 145 aaKnown RBP19.97■□□□□ 0.79
SNX4-201ENST00000251775 MYPNQ86TC9 1320 aa19.97■□□□□ 0.79
SNX4-201ENST00000251775 HLA-DRAP01903 254 aa19.97■□□□□ 0.79
SNX4-201ENST00000251775 C4BPAP04003 597 aaKnown RBP19.97■□□□□ 0.79
SNX4-201ENST00000251775 ABHD2P08910 425 aa19.97■□□□□ 0.79
SNX4-201ENST00000251775 ZACNQ401N2 412 aa19.97■□□□□ 0.79
SNX4-201ENST00000251775 TDRD10Q5VZ19 366 aaKnown RBP19.97■□□□□ 0.79
SNX4-201ENST00000251775 MFN1Q8IWA4 741 aa19.97■□□□□ 0.79
SNX4-201ENST00000251775 MAIP1Q8WWC4 291 aa19.97■□□□□ 0.79
SNX4-201ENST00000251775 CPA5Q8WXQ8 436 aa19.97■□□□□ 0.79
SNX4-201ENST00000251775 ZBTB45Q96K62 511 aaPredicted RBP19.97■□□□□ 0.79
SNX4-201ENST00000251775 DCLRE1BQ9H816 532 aa19.97■□□□□ 0.79
SNX4-201ENST00000251775 TNNI1P19237 187 aa19.96■□□□□ 0.79
SNX4-201ENST00000251775 SP100P23497 879 aaPredicted RBP19.96■□□□□ 0.79
SNX4-201ENST00000251775 MAPK4P31152 587 aa19.96■□□□□ 0.79
SNX4-201ENST00000251775 TAF1BQ53T94 588 aaPredicted RBP19.96■□□□□ 0.79
SNX4-201ENST00000251775 C2CD6Q53TS8 623 aa19.96■□□□□ 0.79
SNX4-201ENST00000251775 IZUMO3Q5VZ72 239 aa19.96■□□□□ 0.79
SNX4-201ENST00000251775 FBXO41Q8TF61 875 aa19.96■□□□□ 0.79
SNX4-201ENST00000251775 ZNF333Q96JL9 665 aa19.96■□□□□ 0.79
SNX4-201ENST00000251775 KIAA1586Q9HCI6 787 aa19.96■□□□□ 0.79
SNX4-201ENST00000251775 UBN1Q9NPG3 1134 aa19.96■□□□□ 0.79
SNX4-201ENST00000251775 NMRK1Q9NWW6 199 aa19.96■□□□□ 0.79
SNX4-201ENST00000251775 STYXL1Q9Y6J8 313 aa19.96■□□□□ 0.79
SNX4-201ENST00000251775 MROH7Q68CQ1 1323 aa19.96■□□□□ 0.79
SNX4-201ENST00000251775 SIP14410 1827 aa19.96■□□□□ 0.79
SNX4-201ENST00000251775 GSTTP1A0A1W2PQM5 241 aa19.96■□□□□ 0.79
SNX4-201ENST00000251775 SPDYE16A6NNV3 312 aaPredicted RBP19.96■□□□□ 0.79
SNX4-201ENST00000251775 STAM2O75886 525 aa19.96■□□□□ 0.79
SNX4-201ENST00000251775 PTPN4P29074 926 aa19.96■□□□□ 0.79
SNX4-201ENST00000251775 MAGEA4P43358 317 aa19.96■□□□□ 0.79
SNX4-201ENST00000251775 ROR2Q01974 943 aaKnown RBP19.96■□□□□ 0.79
SNX4-201ENST00000251775 SPDYAQ5MJ70 313 aa19.96■□□□□ 0.79
SNX4-201ENST00000251775 FNBP1Q96RU3 617 aa19.96■□□□□ 0.79
SNX4-201ENST00000251775 TRABDQ9H4I3 376 aa19.96■□□□□ 0.79
SNX4-201ENST00000251775 CYLDQ9NQC7 956 aa19.96■□□□□ 0.79
SNX4-201ENST00000251775 AGO2Q9UKV8 859 aaKnown RBP19.96■□□□□ 0.79
SNX4-201ENST00000251775 NUMBLQ9Y6R0 609 aa19.96■□□□□ 0.79
SNX4-201ENST00000251775 ZNF541Q9H0D2 1346 aa19.95■□□□□ 0.78
SNX4-201ENST00000251775 EXOC1LA0A1B0GW35 172 aa19.95■□□□□ 0.78
SNX4-201ENST00000251775 SIGLEC16A6NMB1 481 aa19.95■□□□□ 0.78
SNX4-201ENST00000251775 H0YCG3 227 aa19.95■□□□□ 0.78
SNX4-201ENST00000251775 VNN1O95497 513 aa19.95■□□□□ 0.78
SNX4-201ENST00000251775 GLRA2P23416 452 aa19.95■□□□□ 0.78
SNX4-201ENST00000251775 RPA3P35244 121 aaPredicted RBP19.95■□□□□ 0.78
SNX4-201ENST00000251775 SLC18A1P54219 525 aa19.95■□□□□ 0.78
SNX4-201ENST00000251775 NR1H3Q13133 447 aa19.95■□□□□ 0.78
SNX4-201ENST00000251775 MUM1Q2TAK8 710 aa19.95■□□□□ 0.78
SNX4-201ENST00000251775 KHDC1Q4VXA5 237 aaKnown RBP19.95■□□□□ 0.78
SNX4-201ENST00000251775 ZBTB41Q5SVQ8 909 aa19.95■□□□□ 0.78
SNX4-201ENST00000251775 RFWD3Q6PCD5 774 aa19.95■□□□□ 0.78
SNX4-201ENST00000251775 CCDC125Q86Z20 511 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms