RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 ECHDC2Q86YB7 292 aa10.68□□□□□ -0.7
COPB1-201ENST00000249923 ALLCQ8N6M5 410 aa10.68□□□□□ -0.7
COPB1-201ENST00000249923 VCPIP1Q96JH7 1222 aa10.68□□□□□ -0.7
COPB1-201ENST00000249923 TMEM121Q9BTD3 319 aa10.68□□□□□ -0.7
COPB1-201ENST00000249923 KIAA1586Q9HCI6 787 aa10.68□□□□□ -0.7
COPB1-201ENST00000249923 ZNF302Q9NR11 478 aa10.68□□□□□ -0.7
COPB1-201ENST00000249923 K7ERI5 159 aa10.68□□□□□ -0.7
COPB1-201ENST00000249923 SPAG7O75391 227 aa10.68□□□□□ -0.7
COPB1-201ENST00000249923 FARP2O94887 1054 aaPredicted RBP10.68□□□□□ -0.7
COPB1-201ENST00000249923 GJB1P08034 283 aa10.68□□□□□ -0.7
COPB1-201ENST00000249923 CDKN2BP42772 138 aa10.68□□□□□ -0.7
COPB1-201ENST00000249923 GPX6P59796 221 aa10.68□□□□□ -0.7
COPB1-201ENST00000249923 BNIP1Q12981 228 aa10.68□□□□□ -0.7
COPB1-201ENST00000249923 PREPLQ4J6C6 727 aaPredicted RBP10.68□□□□□ -0.7
COPB1-201ENST00000249923 ANKRD22Q5VYY1 191 aa10.68□□□□□ -0.7
COPB1-201ENST00000249923 ASRGL1Q7L266 308 aa10.68□□□□□ -0.7
COPB1-201ENST00000249923 USP37Q86T82 979 aa10.68□□□□□ -0.7
COPB1-201ENST00000249923 GRK7Q8WTQ7 553 aa10.68□□□□□ -0.7
COPB1-201ENST00000249923 TRIM11Q96F44 468 aa10.68□□□□□ -0.7
COPB1-201ENST00000249923 TGS1Q96RS0 853 aaKnown RBP10.68□□□□□ -0.7
COPB1-201ENST00000249923 VPS33BQ9H267 617 aa10.68□□□□□ -0.7
COPB1-201ENST00000249923 SLCO1B3Q9NPD5 702 aa10.68□□□□□ -0.7
COPB1-201ENST00000249923 HOMER3Q9NSC5 361 aa10.68□□□□□ -0.7
COPB1-201ENST00000249923 hCG_1818297A0A087WSY0 165 aa10.67□□□□□ -0.7
COPB1-201ENST00000249923 DNALI1O14645 258 aaPredicted RBP10.67□□□□□ -0.7
COPB1-201ENST00000249923 ASMTLO95671 621 aa10.67□□□□□ -0.7
COPB1-201ENST00000249923 GSTA1P08263 222 aa10.67□□□□□ -0.7
COPB1-201ENST00000249923 CD48P09326 243 aa10.67□□□□□ -0.7
COPB1-201ENST00000249923 ATF7P17544 494 aaPredicted RBP10.67□□□□□ -0.7
COPB1-201ENST00000249923 MAN1A1P33908 653 aa10.67□□□□□ -0.7
COPB1-201ENST00000249923 ASPAP45381 313 aa10.67□□□□□ -0.7
COPB1-201ENST00000249923 OAZ1P54368 228 aa10.67□□□□□ -0.7
COPB1-201ENST00000249923 RNASEH2BQ5TBB1 312 aaKnown RBP10.67□□□□□ -0.7
COPB1-201ENST00000249923 TRABD2AQ86V40 505 aa10.67□□□□□ -0.7
COPB1-201ENST00000249923 CEP120Q8N960 986 aa10.67□□□□□ -0.7
COPB1-201ENST00000249923 UTP4Q969X6 686 aaKnown RBP10.67□□□□□ -0.7
COPB1-201ENST00000249923 PLVAPQ9BX97 442 aa10.67□□□□□ -0.7
COPB1-201ENST00000249923 TEX13BQ9BXU2 312 aa10.67□□□□□ -0.7
COPB1-201ENST00000249923 NIFKQ9BYG3 293 aaKnown RBP10.67□□□□□ -0.7
COPB1-201ENST00000249923 XYLT2Q9H1B5 865 aa10.67□□□□□ -0.7
COPB1-201ENST00000249923 ACAD9Q9H845 621 aa10.67□□□□□ -0.7
COPB1-201ENST00000249923 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.67□□□□□ -0.7
COPB1-201ENST00000249923 CLUHO75153 1309 aa10.67□□□□□ -0.7
COPB1-201ENST00000249923 CDH16O75309 829 aa10.67□□□□□ -0.7
COPB1-201ENST00000249923 KRT16P08779 473 aa10.67□□□□□ -0.7
COPB1-201ENST00000249923 WEE2P0C1S8 567 aa10.67□□□□□ -0.7
COPB1-201ENST00000249923 LACTBP83111 547 aaPredicted RBP10.67□□□□□ -0.7
COPB1-201ENST00000249923 TMED2Q15363 201 aa10.67□□□□□ -0.7
COPB1-201ENST00000249923 PKN2Q16513 984 aaKnown RBP10.67□□□□□ -0.7
COPB1-201ENST00000249923 RAB6CQ53S08 254 aa10.67□□□□□ -0.7
COPB1-201ENST00000249923 TREML2Q5T2D2 321 aa10.67□□□□□ -0.7
COPB1-201ENST00000249923 SPOCD1Q6ZMY3 1216 aa10.67□□□□□ -0.7
COPB1-201ENST00000249923 CROCCP2Q86T23 111 aa10.67□□□□□ -0.7
COPB1-201ENST00000249923 ZBTB33Q86T24 672 aa10.67□□□□□ -0.7
COPB1-201ENST00000249923 TRIM50Q86XT4 487 aa10.67□□□□□ -0.7
COPB1-201ENST00000249923 TMEM192Q8IY95 271 aa10.67□□□□□ -0.7
COPB1-201ENST00000249923 CCDC89Q8N998 374 aa10.67□□□□□ -0.7
COPB1-201ENST00000249923 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.67□□□□□ -0.7
COPB1-201ENST00000249923 ZNF668Q96K58 619 aaPredicted RBP10.67□□□□□ -0.7
COPB1-201ENST00000249923 RAB6CQ9H0N0 254 aa10.67□□□□□ -0.7
COPB1-201ENST00000249923 STMN4Q9H169 189 aaPredicted RBP10.67□□□□□ -0.7
COPB1-201ENST00000249923 PARVAQ9NVD7 372 aa10.67□□□□□ -0.7
COPB1-201ENST00000249923 DONSONQ9NYP3 566 aa10.67□□□□□ -0.7
COPB1-201ENST00000249923 CTDP1Q9Y5B0 961 aaPredicted RBP10.67□□□□□ -0.7
COPB1-201ENST00000249923 A0A1W2PPM1 405 aa10.67□□□□□ -0.7
COPB1-201ENST00000249923 TCRBV7S3A2A0A539 114 aa10.67□□□□□ -0.7
COPB1-201ENST00000249923 ANP32DO95626 131 aa10.67□□□□□ -0.7
COPB1-201ENST00000249923 SLC8A1P32418 973 aa10.67□□□□□ -0.7
COPB1-201ENST00000249923 ALDH5A1P51649 535 aaPredicted RBP10.67□□□□□ -0.7
COPB1-201ENST00000249923 ARSEP51690 589 aa10.67□□□□□ -0.7
COPB1-201ENST00000249923 BPIFB4P59827 614 aa10.67□□□□□ -0.7
COPB1-201ENST00000249923 SLC25A11Q02978 314 aaKnown RBP10.67□□□□□ -0.7
COPB1-201ENST00000249923 CAV1Q03135 178 aa10.67□□□□□ -0.7
COPB1-201ENST00000249923 STRN3Q13033 797 aa10.67□□□□□ -0.7
COPB1-201ENST00000249923 ORC1Q13415 861 aa10.67□□□□□ -0.7
COPB1-201ENST00000249923 TNFAIP1Q13829 316 aa10.67□□□□□ -0.7
COPB1-201ENST00000249923 TAF5Q15542 800 aa10.67□□□□□ -0.7
COPB1-201ENST00000249923 SMTNL2Q2TAL5 461 aa10.67□□□□□ -0.7
COPB1-201ENST00000249923 KCNT1Q5JUK3 1230 aa10.67□□□□□ -0.7
COPB1-201ENST00000249923 SPATA21Q7Z572 469 aa10.67□□□□□ -0.7
COPB1-201ENST00000249923 CDR2LQ86X02 465 aaPredicted RBP10.67□□□□□ -0.7
COPB1-201ENST00000249923 JOSD2Q8TAC2 188 aa10.67□□□□□ -0.7
COPB1-201ENST00000249923 FBF1Q8TES7 1133 aa10.67□□□□□ -0.7
COPB1-201ENST00000249923 CNKSR2Q8WXI2 1034 aa10.67□□□□□ -0.7
COPB1-201ENST00000249923 C12orf65Q9H3J6 166 aaKnown RBP10.67□□□□□ -0.7
COPB1-201ENST00000249923 SAYSD1Q9NPB0 183 aa10.67□□□□□ -0.7
COPB1-201ENST00000249923 CISHQ9NSE2 258 aa10.67□□□□□ -0.7
COPB1-201ENST00000249923 MCM8Q9UJA3 840 aa10.67□□□□□ -0.7
COPB1-201ENST00000249923 FARP1Q9Y4F1 1045 aaPredicted RBP10.67□□□□□ -0.7
COPB1-201ENST00000249923 POLR2AP24928 1970 aaKnown RBP10.66□□□□□ -0.7
COPB1-201ENST00000249923 ADCY3O60266 1144 aa10.66□□□□□ -0.7
COPB1-201ENST00000249923 ARIH2O95376 493 aa10.66□□□□□ -0.7
COPB1-201ENST00000249923 HOXC6P09630 235 aa10.66□□□□□ -0.7
COPB1-201ENST00000249923 STX2P32856 288 aa10.66□□□□□ -0.7
COPB1-201ENST00000249923 ICAM3P32942 547 aa10.66□□□□□ -0.7
COPB1-201ENST00000249923 TAF11Q15544 211 aa10.66□□□□□ -0.7
COPB1-201ENST00000249923 PTPN20Q4JDL3 420 aa10.66□□□□□ -0.7
COPB1-201ENST00000249923 SCARA5Q6ZMJ2 495 aa10.66□□□□□ -0.7
COPB1-201ENST00000249923 ZNF365Q70YC5 407 aa10.66□□□□□ -0.7
COPB1-201ENST00000249923 BRSK2Q8IWQ3 736 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms