RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 NVLO15381 856 aaKnown RBP17.75■□□□□ 0.43
SGPP1-201ENST00000247225 DHX15O43143 795 aaKnown RBP17.75■□□□□ 0.43
SGPP1-201ENST00000247225 LIASO43766 372 aa17.75■□□□□ 0.43
SGPP1-201ENST00000247225 PEX10O60683 326 aa17.75■□□□□ 0.43
SGPP1-201ENST00000247225 LPXNO60711 386 aa17.75■□□□□ 0.43
SGPP1-201ENST00000247225 UNGP13051 313 aaPredicted RBP17.75■□□□□ 0.43
SGPP1-201ENST00000247225 GPC3P51654 580 aa17.75■□□□□ 0.43
SGPP1-201ENST00000247225 OTUD4Q01804 1114 aaKnown RBP17.75■□□□□ 0.43
SGPP1-201ENST00000247225 SNX30Q5VWJ9 437 aa17.75■□□□□ 0.43
SGPP1-201ENST00000247225 SCYL2Q6P3W7 929 aa17.75■□□□□ 0.43
SGPP1-201ENST00000247225 CCDC62Q6P9F0 684 aa17.75■□□□□ 0.43
SGPP1-201ENST00000247225 ZCCHC9Q8N567 271 aaKnown RBP17.75■□□□□ 0.43
SGPP1-201ENST00000247225 EFCAB3Q8N7B9 438 aa17.75■□□□□ 0.43
SGPP1-201ENST00000247225 BBOF1Q8ND07 529 aa17.75■□□□□ 0.43
SGPP1-201ENST00000247225 APOBEC3GQ9HC16 384 aaKnown RBP17.75■□□□□ 0.43
SGPP1-201ENST00000247225 KCND2Q9NZV8 630 aa17.75■□□□□ 0.43
SGPP1-201ENST00000247225 CD48P09326 243 aa17.74■□□□□ 0.43
SGPP1-201ENST00000247225 PSMA2P25787 234 aa17.74■□□□□ 0.43
SGPP1-201ENST00000247225 BMPR2Q13873 1038 aa17.74■□□□□ 0.43
SGPP1-201ENST00000247225 VPS72Q15906 364 aa17.74■□□□□ 0.43
SGPP1-201ENST00000247225 ALYREFQ86V81 257 aaKnown RBP17.74■□□□□ 0.43
SGPP1-201ENST00000247225 MAB21L3Q8N8X9 362 aa17.74■□□□□ 0.43
SGPP1-201ENST00000247225 C12orf50Q8NA57 414 aaPredicted RBP17.74■□□□□ 0.43
SGPP1-201ENST00000247225 C7orf43Q8WVR3 580 aa17.74■□□□□ 0.43
SGPP1-201ENST00000247225 GRAMD1AQ96CP6 724 aa17.74■□□□□ 0.43
SGPP1-201ENST00000247225 TRIM56Q9BRZ2 755 aaKnown RBP17.74■□□□□ 0.43
SGPP1-201ENST00000247225 MSTO1Q9BUK6 570 aa17.74■□□□□ 0.43
SGPP1-201ENST00000247225 TSSK1BQ9BXA7 367 aa17.74■□□□□ 0.43
SGPP1-201ENST00000247225 TRIM55Q9BYV6 548 aa17.74■□□□□ 0.43
SGPP1-201ENST00000247225 IMPG2Q9BZV3 1241 aa17.74■□□□□ 0.43
SGPP1-201ENST00000247225 MANSC1Q9H8J5 431 aa17.74■□□□□ 0.43
SGPP1-201ENST00000247225 PIH1D1Q9NWS0 290 aaKnown RBP17.74■□□□□ 0.43
SGPP1-201ENST00000247225 NUB1Q9Y5A7 615 aa17.74■□□□□ 0.43
SGPP1-201ENST00000247225 WDR64B1ANS9 1081 aa17.74■□□□□ 0.43
SGPP1-201ENST00000247225 GCAP28676 217 aa17.74■□□□□ 0.43
SGPP1-201ENST00000247225 TEKT4Q8WW24 435 aa17.74■□□□□ 0.43
SGPP1-201ENST00000247225 SENP7Q9BQF6 1050 aa17.74■□□□□ 0.43
SGPP1-201ENST00000247225 IDI2Q9BXS1 227 aa17.74■□□□□ 0.43
SGPP1-201ENST00000247225 PSMC3IPQ9P2W1 217 aaPredicted RBP17.74■□□□□ 0.43
SGPP1-201ENST00000247225 MAGED2Q9UNF1 606 aaPredicted RBP17.74■□□□□ 0.43
SGPP1-201ENST00000247225 KDM4FA0A1W2PPD8 638 aa17.74■□□□□ 0.43
SGPP1-201ENST00000247225 MYL2P10916 166 aa17.74■□□□□ 0.43
SGPP1-201ENST00000247225 PYGBP11216 843 aa17.74■□□□□ 0.43
SGPP1-201ENST00000247225 GLRA2P23416 452 aa17.74■□□□□ 0.43
SGPP1-201ENST00000247225 MMP14P50281 582 aa17.74■□□□□ 0.43
SGPP1-201ENST00000247225 TAF5Q15542 800 aa17.74■□□□□ 0.43
SGPP1-201ENST00000247225 C1orf228Q6PIY5 440 aa17.74■□□□□ 0.43
SGPP1-201ENST00000247225 PPP1R14CQ8TAE6 165 aa17.74■□□□□ 0.43
SGPP1-201ENST00000247225 DEPTORQ8TB45 409 aa17.74■□□□□ 0.43
SGPP1-201ENST00000247225 SYTL5Q8TDW5 730 aaPredicted RBP17.74■□□□□ 0.43
SGPP1-201ENST00000247225 CCDC124Q96CT7 223 aaKnown RBP17.74■□□□□ 0.43
SGPP1-201ENST00000247225 MAD1L1Q9Y6D9 718 aa17.74■□□□□ 0.43
SGPP1-201ENST00000247225 WASF2Q9Y6W5 498 aa17.74■□□□□ 0.43
SGPP1-201ENST00000247225 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.73■□□□□ 0.43
SGPP1-201ENST00000247225 ARHGAP42A6NI28 874 aa17.73■□□□□ 0.43
SGPP1-201ENST00000247225 PPP1R12AO14974 1030 aaPredicted RBP17.73■□□□□ 0.43
SGPP1-201ENST00000247225 LUC7L3O95232 432 aaKnown RBP17.73■□□□□ 0.43
SGPP1-201ENST00000247225 SRGAP2CP0DJJ0 459 aa17.73■□□□□ 0.43
SGPP1-201ENST00000247225 SLC1A1P43005 524 aa17.73■□□□□ 0.43
SGPP1-201ENST00000247225 ALDH18A1P54886 795 aaKnown RBP17.73■□□□□ 0.43
SGPP1-201ENST00000247225 BLMHQ13867 455 aa17.73■□□□□ 0.43
SGPP1-201ENST00000247225 NPNTQ6UXI9 565 aa17.73■□□□□ 0.43
SGPP1-201ENST00000247225 ZCCHC23Q6ZST2 131 aa17.73■□□□□ 0.43
SGPP1-201ENST00000247225 WDR60Q8WVS4 1066 aa17.73■□□□□ 0.43
SGPP1-201ENST00000247225 SCG3Q8WXD2 468 aaKnown RBP17.73■□□□□ 0.43
SGPP1-201ENST00000247225 MIPEPQ99797 713 aa17.73■□□□□ 0.43
SGPP1-201ENST00000247225 TMEM120AQ9BXJ8 343 aa17.73■□□□□ 0.43
SGPP1-201ENST00000247225 CADM1Q9BY67 442 aaKnown RBP17.73■□□□□ 0.43
SGPP1-201ENST00000247225 FBXO40Q9UH90 709 aa17.73■□□□□ 0.43
SGPP1-201ENST00000247225 B2RBV5 119 aa17.73■□□□□ 0.43
SGPP1-201ENST00000247225 K7ERI5 159 aa17.73■□□□□ 0.43
SGPP1-201ENST00000247225 ZNF862O60290 1169 aa17.73■□□□□ 0.43
SGPP1-201ENST00000247225 INHBAP08476 426 aa17.73■□□□□ 0.43
SGPP1-201ENST00000247225 KLC1Q07866 573 aa17.73■□□□□ 0.43
SGPP1-201ENST00000247225 NFIL3Q16649 462 aa17.73■□□□□ 0.43
SGPP1-201ENST00000247225 PDK4Q16654 411 aa17.73■□□□□ 0.43
SGPP1-201ENST00000247225 GPAT2Q6NUI2 795 aa17.73■□□□□ 0.43
SGPP1-201ENST00000247225 SPOCD1Q6ZMY3 1216 aa17.73■□□□□ 0.43
SGPP1-201ENST00000247225 CLNKQ7Z7G1 428 aa17.73■□□□□ 0.43
SGPP1-201ENST00000247225 ZNF483Q8TF39 744 aaPredicted RBP17.73■□□□□ 0.43
SGPP1-201ENST00000247225 ZNF606Q8WXB4 792 aa17.73■□□□□ 0.43
SGPP1-201ENST00000247225 NMRK1Q9NWW6 199 aa17.73■□□□□ 0.43
SGPP1-201ENST00000247225 XPO7Q9UIA9 1087 aaKnown RBP17.73■□□□□ 0.43
SGPP1-201ENST00000247225 STARD13Q9Y3M8 1113 aa17.73■□□□□ 0.43
SGPP1-201ENST00000247225 HEY1Q9Y5J3 304 aa17.73■□□□□ 0.43
SGPP1-201ENST00000247225 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.72■□□□□ 0.43
SGPP1-201ENST00000247225 CST3P01034 146 aaPredicted RBP17.72■□□□□ 0.43
SGPP1-201ENST00000247225 OGDHQ02218 1023 aa17.72■□□□□ 0.43
SGPP1-201ENST00000247225 CENPCQ03188 943 aa17.72■□□□□ 0.43
SGPP1-201ENST00000247225 CUL2Q13617 745 aa17.72■□□□□ 0.43
SGPP1-201ENST00000247225 THNSL1Q8IYQ7 743 aa17.72■□□□□ 0.43
SGPP1-201ENST00000247225 NETO2Q8NC67 525 aa17.72■□□□□ 0.43
SGPP1-201ENST00000247225 ACAP3Q96P50 834 aa17.72■□□□□ 0.43
SGPP1-201ENST00000247225 THTPAQ9BU02 230 aa17.72■□□□□ 0.43
SGPP1-201ENST00000247225 STRA6Q9BX79 667 aa17.72■□□□□ 0.43
SGPP1-201ENST00000247225 MTA2O94776 668 aa17.72■□□□□ 0.43
SGPP1-201ENST00000247225 PGM1P36871 562 aa17.72■□□□□ 0.43
SGPP1-201ENST00000247225 RAP1GAPP47736 663 aa17.72■□□□□ 0.43
SGPP1-201ENST00000247225 FAAP100Q0VG06 881 aa17.72■□□□□ 0.43
SGPP1-201ENST00000247225 TRAF1Q13077 416 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms