RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 ZNF394Q53GI3 561 aa23.16■■□□□ 1.3
RNF39-201ENST00000244360 ZNF484Q5JVG2 852 aa23.16■■□□□ 1.3
RNF39-201ENST00000244360 PIGWQ7Z7B1 504 aa23.16■■□□□ 1.3
RNF39-201ENST00000244360 IFNLR1Q8IU57 520 aaPredicted RBP23.16■■□□□ 1.3
RNF39-201ENST00000244360 LINC01465Q8N7H1 131 aa23.16■■□□□ 1.3
RNF39-201ENST00000244360 MCEEQ96PE7 176 aa23.16■■□□□ 1.3
RNF39-201ENST00000244360 SLITRK1Q96PX8 696 aa23.16■■□□□ 1.3
RNF39-201ENST00000244360 BCO2Q9BYV7 579 aa23.16■■□□□ 1.3
RNF39-201ENST00000244360 PRMT7Q9NVM4 692 aaPredicted RBP23.16■■□□□ 1.3
RNF39-201ENST00000244360 CCT8L1PA6NM43 557 aa23.16■■□□□ 1.3
RNF39-201ENST00000244360 GSTA1P08263 222 aa23.16■■□□□ 1.3
RNF39-201ENST00000244360 IQCF3P0C7M6 154 aa23.16■■□□□ 1.3
RNF39-201ENST00000244360 CHKAP35790 457 aa23.16■■□□□ 1.3
RNF39-201ENST00000244360 IFI35P80217 286 aaPredicted RBP23.16■■□□□ 1.3
RNF39-201ENST00000244360 OGDHQ02218 1023 aa23.16■■□□□ 1.3
RNF39-201ENST00000244360 XRCC4Q13426 336 aa23.16■■□□□ 1.3
RNF39-201ENST00000244360 DRICH1Q6PGQ1 229 aaPredicted RBP23.16■■□□□ 1.3
RNF39-201ENST00000244360 SCARA5Q6ZMJ2 495 aa23.16■■□□□ 1.3
RNF39-201ENST00000244360 USP50Q70EL3 339 aaPredicted RBP23.16■■□□□ 1.3
RNF39-201ENST00000244360 CCDC25Q86WR0 208 aa23.16■■□□□ 1.3
RNF39-201ENST00000244360 EPS8L3Q8TE67 593 aaKnown RBP23.16■■□□□ 1.3
RNF39-201ENST00000244360 ZNF668Q96K58 619 aaPredicted RBP23.16■■□□□ 1.3
RNF39-201ENST00000244360 RNPEPQ9H4A4 650 aa23.16■■□□□ 1.3
RNF39-201ENST00000244360 RPF1Q9H9Y2 349 aaKnown RBP23.16■■□□□ 1.3
RNF39-201ENST00000244360 IFT122Q9HBG6 1241 aa23.16■■□□□ 1.3
RNF39-201ENST00000244360 SIX4Q9UIU6 781 aa23.16■■□□□ 1.3
RNF39-201ENST00000244360 SMIM23A6NLE4 172 aa23.15■■□□□ 1.3
RNF39-201ENST00000244360 CXCL8P10145 99 aa23.15■■□□□ 1.3
RNF39-201ENST00000244360 TCF4P15884 667 aa23.15■■□□□ 1.3
RNF39-201ENST00000244360 SSR1P43307 286 aaKnown RBP23.15■■□□□ 1.3
RNF39-201ENST00000244360 AUHQ13825 339 aaKnown RBP23.15■■□□□ 1.3
RNF39-201ENST00000244360 ARMCX2Q7L311 632 aa23.15■■□□□ 1.3
RNF39-201ENST00000244360 CCDC89Q8N998 374 aa23.15■■□□□ 1.3
RNF39-201ENST00000244360 BBOF1Q8ND07 529 aa23.15■■□□□ 1.3
RNF39-201ENST00000244360 ZBTB10Q96DT7 871 aa23.15■■□□□ 1.3
RNF39-201ENST00000244360 SCLT1Q96NL6 688 aa23.15■■□□□ 1.3
RNF39-201ENST00000244360 LHX5Q9H2C1 402 aa23.15■■□□□ 1.3
RNF39-201ENST00000244360 CEP83Q9Y592 693 aa23.15■■□□□ 1.3
RNF39-201ENST00000244360 KLRC2P26717 231 aa23.14■■□□□ 1.3
RNF39-201ENST00000244360 GJA5P36382 358 aa23.14■■□□□ 1.3
RNF39-201ENST00000244360 GJC1P36383 396 aa23.14■■□□□ 1.3
RNF39-201ENST00000244360 PHKA2P46019 1235 aa23.14■■□□□ 1.3
RNF39-201ENST00000244360 COPS2P61201 443 aa23.14■■□□□ 1.3
RNF39-201ENST00000244360 OSTNP61366 133 aa23.14■■□□□ 1.3
RNF39-201ENST00000244360 PIGHQ14442 188 aaPredicted RBP23.14■■□□□ 1.3
RNF39-201ENST00000244360 AMHR2Q16671 573 aa23.14■■□□□ 1.3
RNF39-201ENST00000244360 WDR78Q5VTH9 848 aa23.14■■□□□ 1.3
RNF39-201ENST00000244360 ERICH1Q86X53 443 aa23.14■■□□□ 1.3
RNF39-201ENST00000244360 TMEM192Q8IY95 271 aa23.14■■□□□ 1.3
RNF39-201ENST00000244360 SGSM3Q96HU1 749 aa23.14■■□□□ 1.3
RNF39-201ENST00000244360 L3MBTL3Q96JM7 780 aaPredicted RBP23.14■■□□□ 1.3
RNF39-201ENST00000244360 SERPINB12Q96P63 405 aa23.14■■□□□ 1.3
RNF39-201ENST00000244360 POLIQ9UNA4 740 aa23.14■■□□□ 1.3
RNF39-201ENST00000244360 GPR25O00155 361 aa23.14■■□□□ 1.29
RNF39-201ENST00000244360 ADCY8P40145 1251 aa23.14■■□□□ 1.29
RNF39-201ENST00000244360 TRIP13Q15645 432 aaPredicted RBP23.14■■□□□ 1.29
RNF39-201ENST00000244360 DDX23Q9BUQ8 820 aaKnown RBP23.14■■□□□ 1.29
RNF39-201ENST00000244360 ANAPC5Q9UJX4 755 aa23.14■■□□□ 1.29
RNF39-201ENST00000244360 STRIP2Q9ULQ0 834 aa23.14■■□□□ 1.29
RNF39-201ENST00000244360 IVNS1ABPQ9Y6Y0 642 aa23.14■■□□□ 1.29
RNF39-201ENST00000244360 F8VP50 259 aa23.13■■□□□ 1.29
RNF39-201ENST00000244360 KRT1P04264 644 aa23.13■■□□□ 1.29
RNF39-201ENST00000244360 MCF2P10911 925 aa23.13■■□□□ 1.29
RNF39-201ENST00000244360 LAMC2Q13753 1193 aa23.13■■□□□ 1.29
RNF39-201ENST00000244360 TMEM132AQ24JP5 1023 aa23.13■■□□□ 1.29
RNF39-201ENST00000244360 ATP13A4Q4VNC1 1196 aa23.13■■□□□ 1.29
RNF39-201ENST00000244360 DENND1BQ6P3S1 775 aa23.13■■□□□ 1.29
RNF39-201ENST00000244360 CYB5D1Q6P9G0 228 aa23.13■■□□□ 1.29
RNF39-201ENST00000244360 DCUN1D2Q6PH85 259 aa23.13■■□□□ 1.29
RNF39-201ENST00000244360 ZNF365Q70YC5 407 aa23.13■■□□□ 1.29
RNF39-201ENST00000244360 CDR2LQ86X02 465 aaPredicted RBP23.13■■□□□ 1.29
RNF39-201ENST00000244360 RELL1Q8IUW5 271 aa23.13■■□□□ 1.29
RNF39-201ENST00000244360 FUKQ8N0W3 1084 aa23.13■■□□□ 1.29
RNF39-201ENST00000244360 C1orf127Q8N9H9 656 aa23.13■■□□□ 1.29
RNF39-201ENST00000244360 UHMK1Q8TAS1 419 aaKnown RBP23.13■■□□□ 1.29
RNF39-201ENST00000244360 GTF3C2Q8WUA4 911 aaPredicted RBP23.13■■□□□ 1.29
RNF39-201ENST00000244360 MGAMO43451 1857 aa23.13■■□□□ 1.29
RNF39-201ENST00000244360 LIASO43766 372 aa23.13■■□□□ 1.29
RNF39-201ENST00000244360 TTC4O95801 387 aa23.13■■□□□ 1.29
RNF39-201ENST00000244360 LGALS2P05162 132 aa23.13■■□□□ 1.29
RNF39-201ENST00000244360 INSRRP14616 1297 aa23.13■■□□□ 1.29
RNF39-201ENST00000244360 LMNB2Q03252 620 aa23.13■■□□□ 1.29
RNF39-201ENST00000244360 LDLRAD1Q5T700 205 aa23.13■■□□□ 1.29
RNF39-201ENST00000244360 TAPT1Q6NXT6 567 aa23.13■■□□□ 1.29
RNF39-201ENST00000244360 MFSD7Q6UXD7 560 aa23.13■■□□□ 1.29
RNF39-201ENST00000244360 CXorf38Q8TB03 319 aa23.13■■□□□ 1.29
RNF39-201ENST00000244360 PRMT1Q99873 361 aaKnown RBP23.13■■□□□ 1.29
RNF39-201ENST00000244360 NFICP08651 508 aa23.12■■□□□ 1.29
RNF39-201ENST00000244360 RDXP35241 583 aaKnown RBP23.12■■□□□ 1.29
RNF39-201ENST00000244360 GSCP56915 257 aaPredicted RBP23.12■■□□□ 1.29
RNF39-201ENST00000244360 LACTBP83111 547 aaPredicted RBP23.12■■□□□ 1.29
RNF39-201ENST00000244360 SNAPC2Q13487 334 aa23.12■■□□□ 1.29
RNF39-201ENST00000244360 SNCBQ16143 134 aa23.12■■□□□ 1.29
RNF39-201ENST00000244360 CNGA2Q16280 664 aa23.12■■□□□ 1.29
RNF39-201ENST00000244360 ZNF792Q3KQV3 632 aa23.12■■□□□ 1.29
RNF39-201ENST00000244360 ZNF667Q5HYK9 610 aa23.12■■□□□ 1.29
RNF39-201ENST00000244360 SPOCD1Q6ZMY3 1216 aa23.12■■□□□ 1.29
RNF39-201ENST00000244360 TACO1Q9BSH4 297 aaKnown RBP23.12■■□□□ 1.29
RNF39-201ENST00000244360 KLHL11Q9NVR0 708 aa23.12■■□□□ 1.29
RNF39-201ENST00000244360 DDX56Q9NY93 547 aaKnown RBP23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms