RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 FHOD1Q9Y613 1164 aa10.86□□□□□ -0.67
HMGCL-201ENST00000235958 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.85□□□□□ -0.67
HMGCL-201ENST00000235958 OR6C75A6NL08 312 aa10.85□□□□□ -0.67
HMGCL-201ENST00000235958 A8MXQ7 604 aa10.85□□□□□ -0.67
HMGCL-201ENST00000235958 TEX28O15482 410 aa10.85□□□□□ -0.67
HMGCL-201ENST00000235958 CILPO75339 1184 aa10.85□□□□□ -0.67
HMGCL-201ENST00000235958 PTPN1P18031 435 aaKnown RBP10.85□□□□□ -0.67
HMGCL-201ENST00000235958 PCSK1P29120 753 aa10.85□□□□□ -0.67
HMGCL-201ENST00000235958 ZNF75DP51815 510 aa10.85□□□□□ -0.67
HMGCL-201ENST00000235958 CDR1P51861 262 aa10.85□□□□□ -0.67
HMGCL-201ENST00000235958 RAD23BP54727 409 aa10.85□□□□□ -0.67
HMGCL-201ENST00000235958 ARPP19P56211 112 aa10.85□□□□□ -0.67
HMGCL-201ENST00000235958 YWHAEP62258 255 aaKnown RBP10.85□□□□□ -0.67
HMGCL-201ENST00000235958 INCA1Q0VD86 236 aa10.85□□□□□ -0.67
HMGCL-201ENST00000235958 GSE1Q14687 1217 aa10.85□□□□□ -0.67
HMGCL-201ENST00000235958 DRAP1Q14919 205 aaPredicted RBP10.85□□□□□ -0.67
HMGCL-201ENST00000235958 PTPROQ16827 1216 aa10.85□□□□□ -0.67
HMGCL-201ENST00000235958 ZNF394Q53GI3 561 aa10.85□□□□□ -0.67
HMGCL-201ENST00000235958 ZNF280DQ6N043 979 aa10.85□□□□□ -0.67
HMGCL-201ENST00000235958 Q7L0L9 218 aa10.85□□□□□ -0.67
HMGCL-201ENST00000235958 ACOT1Q86TX2 421 aa10.85□□□□□ -0.67
HMGCL-201ENST00000235958 UNC93AQ86WB7 457 aa10.85□□□□□ -0.67
HMGCL-201ENST00000235958 GLYCTKQ8IVS8 523 aa10.85□□□□□ -0.67
HMGCL-201ENST00000235958 CRYBG2Q8N1P7 616 aa10.85□□□□□ -0.67
HMGCL-201ENST00000235958 UBR7Q8N806 425 aa10.85□□□□□ -0.67
HMGCL-201ENST00000235958 OR10T2Q8NGX3 314 aa10.85□□□□□ -0.67
HMGCL-201ENST00000235958 CPLX3Q8WVH0 158 aa10.85□□□□□ -0.67
HMGCL-201ENST00000235958 HEXIM2Q96MH2 286 aaKnown RBP10.85□□□□□ -0.67
HMGCL-201ENST00000235958 KLHL5Q96PQ7 755 aa10.85□□□□□ -0.67
HMGCL-201ENST00000235958 TMEM209Q96SK2 561 aa10.85□□□□□ -0.67
HMGCL-201ENST00000235958 LPIN3Q9BQK8 851 aa10.85□□□□□ -0.67
HMGCL-201ENST00000235958 NUP58Q9BVL2 599 aa10.85□□□□□ -0.67
HMGCL-201ENST00000235958 NT5C1AQ9BXI3 368 aa10.85□□□□□ -0.67
HMGCL-201ENST00000235958 OXCT2Q9BYC2 517 aaPredicted RBP10.85□□□□□ -0.67
HMGCL-201ENST00000235958 ELOVL4Q9GZR5 314 aa10.85□□□□□ -0.67
HMGCL-201ENST00000235958 FAM124BQ9H5Z6 455 aaPredicted RBP10.85□□□□□ -0.67
HMGCL-201ENST00000235958 GRPEL1Q9HAV7 217 aa10.85□□□□□ -0.67
HMGCL-201ENST00000235958 LMCD1Q9NZU5 365 aa10.85□□□□□ -0.67
HMGCL-201ENST00000235958 GTF3C4Q9UKN8 822 aa10.85□□□□□ -0.67
HMGCL-201ENST00000235958 CDH9Q9ULB4 789 aa10.85□□□□□ -0.67
HMGCL-201ENST00000235958 CNTN6Q9UQ52 1028 aa10.85□□□□□ -0.67
HMGCL-201ENST00000235958 CDY1Q9Y6F8 540 aa10.85□□□□□ -0.67
HMGCL-201ENST00000235958 MYBPHLA2RUH7 354 aa10.84□□□□□ -0.67
HMGCL-201ENST00000235958 PER2O15055 1255 aa10.84□□□□□ -0.67
HMGCL-201ENST00000235958 ADCY5O95622 1261 aa10.84□□□□□ -0.67
HMGCL-201ENST00000235958 OR4Q2P0C623 313 aa10.84□□□□□ -0.67
HMGCL-201ENST00000235958 KRT5P13647 590 aa10.84□□□□□ -0.67
HMGCL-201ENST00000235958 TRIM21P19474 475 aaKnown RBP10.84□□□□□ -0.67
HMGCL-201ENST00000235958 POU3F3P20264 500 aaPredicted RBP10.84□□□□□ -0.67
HMGCL-201ENST00000235958 IGFBP4P22692 258 aa10.84□□□□□ -0.67
HMGCL-201ENST00000235958 KLRC2P26717 231 aa10.84□□□□□ -0.67
HMGCL-201ENST00000235958 USP8P40818 1118 aa10.84□□□□□ -0.67
HMGCL-201ENST00000235958 ORC1Q13415 861 aa10.84□□□□□ -0.67
HMGCL-201ENST00000235958 RAPGEF1Q13905 1077 aa10.84□□□□□ -0.67
HMGCL-201ENST00000235958 RAB33AQ14088 237 aa10.84□□□□□ -0.67
HMGCL-201ENST00000235958 ADGRE1Q14246 886 aa10.84□□□□□ -0.67
HMGCL-201ENST00000235958 SLC8B1Q6J4K2 584 aa10.84□□□□□ -0.67
HMGCL-201ENST00000235958 FAM171BQ6P995 826 aa10.84□□□□□ -0.67
HMGCL-201ENST00000235958 LILRA6Q6PI73 481 aa10.84□□□□□ -0.67
HMGCL-201ENST00000235958 TMEM270Q6UE05 265 aa10.84□□□□□ -0.67
HMGCL-201ENST00000235958 RBM23Q86U06 439 aaKnown RBP10.84□□□□□ -0.67
HMGCL-201ENST00000235958 PALB2Q86YC2 1186 aa10.84□□□□□ -0.67
HMGCL-201ENST00000235958 VSTM4Q8IW00 320 aa10.84□□□□□ -0.67
HMGCL-201ENST00000235958 DEFB123Q8N688 67 aa10.84□□□□□ -0.67
HMGCL-201ENST00000235958 C12orf29Q8N999 325 aa10.84□□□□□ -0.67
HMGCL-201ENST00000235958 SLC4A11Q8NBS3 891 aa10.84□□□□□ -0.67
HMGCL-201ENST00000235958 ZNF461Q8TAF7 563 aa10.84□□□□□ -0.67
HMGCL-201ENST00000235958 SHC3Q92529 594 aa10.84□□□□□ -0.67
HMGCL-201ENST00000235958 TMEM176AQ96HP8 235 aa10.84□□□□□ -0.67
HMGCL-201ENST00000235958 TNIP3Q96KP6 325 aa10.84□□□□□ -0.67
HMGCL-201ENST00000235958 TWNKQ96RR1 684 aa10.84□□□□□ -0.67
HMGCL-201ENST00000235958 EMILIN2Q9BXX0 1053 aa10.84□□□□□ -0.67
HMGCL-201ENST00000235958 EDEM3Q9BZQ6 932 aa10.84□□□□□ -0.67
HMGCL-201ENST00000235958 ZCWPW1Q9H0M4 648 aa10.84□□□□□ -0.67
HMGCL-201ENST00000235958 DPEP3Q9H4B8 488 aa10.84□□□□□ -0.67
HMGCL-201ENST00000235958 TLE6Q9H808 572 aa10.84□□□□□ -0.67
HMGCL-201ENST00000235958 CRTAC1Q9NQ79 661 aa10.84□□□□□ -0.67
HMGCL-201ENST00000235958 TMLHEQ9NVH6 421 aa10.84□□□□□ -0.67
HMGCL-201ENST00000235958 HMGXB4Q9UGU5 601 aa10.84□□□□□ -0.67
HMGCL-201ENST00000235958 MTCH2Q9Y6C9 303 aa10.84□□□□□ -0.67
HMGCL-201ENST00000235958 MYH10P35580 1976 aa10.83□□□□□ -0.68
HMGCL-201ENST00000235958 CYP26A1O43174 497 aa10.83□□□□□ -0.68
HMGCL-201ENST00000235958 ABLIM3O94929 683 aa10.83□□□□□ -0.68
HMGCL-201ENST00000235958 CALCAP01258 141 aa10.83□□□□□ -0.68
HMGCL-201ENST00000235958 ADH1AP07327 375 aa10.83□□□□□ -0.68
HMGCL-201ENST00000235958 SPATA31D3P0C874 917 aa10.83□□□□□ -0.68
HMGCL-201ENST00000235958 PNMA6AP0CW24 399 aaPredicted RBP10.83□□□□□ -0.68
HMGCL-201ENST00000235958 RFX1P22670 979 aa10.83□□□□□ -0.68
HMGCL-201ENST00000235958 CLCN1P35523 988 aa10.83□□□□□ -0.68
HMGCL-201ENST00000235958 NDUFV1P49821 464 aa10.83□□□□□ -0.68
HMGCL-201ENST00000235958 FXR1P51114 621 aaKnown RBP eCLIP10.83□□□□□ -0.68
HMGCL-201ENST00000235958 JAM2P57087 298 aa10.83□□□□□ -0.68
HMGCL-201ENST00000235958 PSMC1P62191 440 aaKnown RBP10.83□□□□□ -0.68
HMGCL-201ENST00000235958 TSPY1Q01534 308 aa10.83□□□□□ -0.68
HMGCL-201ENST00000235958 ROR1Q01973 937 aa10.83□□□□□ -0.68
HMGCL-201ENST00000235958 CREMQ03060 361 aa10.83□□□□□ -0.68
HMGCL-201ENST00000235958 GPR17Q13304 367 aa10.83□□□□□ -0.68
HMGCL-201ENST00000235958 CCDC142Q17RM4 750 aa10.83□□□□□ -0.68
HMGCL-201ENST00000235958 SLC39A12Q504Y0 691 aa10.83□□□□□ -0.68
HMGCL-201ENST00000235958 FIGNQ5HY92 759 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms