RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 SGK1O00141 431 aa14.88□□□□□ -0.03
PCDHB3-201ENST00000231130 ASLP04424 464 aa14.88□□□□□ -0.03
PCDHB3-201ENST00000231130 TROVE2P10155 538 aaKnown RBP eCLIP14.88□□□□□ -0.03
PCDHB3-201ENST00000231130 KITP10721 976 aa14.88□□□□□ -0.03
PCDHB3-201ENST00000231130 TCF4P15884 667 aa14.88□□□□□ -0.03
PCDHB3-201ENST00000231130 ECE1P42892 770 aa14.88□□□□□ -0.03
PCDHB3-201ENST00000231130 DSG1Q02413 1049 aa14.88□□□□□ -0.03
PCDHB3-201ENST00000231130 AP1B1Q10567 949 aa14.88□□□□□ -0.03
PCDHB3-201ENST00000231130 CCDC92Q53HC0 331 aaPredicted RBP14.88□□□□□ -0.03
PCDHB3-201ENST00000231130 C1orf220Q5T0J3 134 aa14.88□□□□□ -0.03
PCDHB3-201ENST00000231130 GRAMD4Q6IC98 578 aa14.88□□□□□ -0.03
PCDHB3-201ENST00000231130 SPOPLQ6IQ16 392 aa14.88□□□□□ -0.03
PCDHB3-201ENST00000231130 ACAD10Q6JQN1 1059 aa14.88□□□□□ -0.03
PCDHB3-201ENST00000231130 PRR5LQ6MZQ0 368 aa14.88□□□□□ -0.03
PCDHB3-201ENST00000231130 MIER3Q7Z3K6 550 aa14.88□□□□□ -0.03
PCDHB3-201ENST00000231130 SCUBE1Q8IWY4 988 aa14.88□□□□□ -0.03
PCDHB3-201ENST00000231130 UVRAGQ9P2Y5 699 aa14.88□□□□□ -0.03
PCDHB3-201ENST00000231130 TCEAL9Q9UHQ7 104 aa14.88□□□□□ -0.03
PCDHB3-201ENST00000231130 ZNF180Q9UJW8 692 aa14.88□□□□□ -0.03
PCDHB3-201ENST00000231130 SPATA31A1Q5TZJ5 1347 aa14.88□□□□□ -0.03
PCDHB3-201ENST00000231130 IPO5O00410 1097 aaKnown RBP14.88□□□□□ -0.03
PCDHB3-201ENST00000231130 PENKP01210 267 aaPredicted RBP14.88□□□□□ -0.03
PCDHB3-201ENST00000231130 CYP1A2P05177 515 aa14.88□□□□□ -0.03
PCDHB3-201ENST00000231130 IL1R1P14778 569 aa14.88□□□□□ -0.03
PCDHB3-201ENST00000231130 SNRNP35Q16560 246 aaKnown RBP14.88□□□□□ -0.03
PCDHB3-201ENST00000231130 FAM196AQ6ZSG2 479 aa14.88□□□□□ -0.03
PCDHB3-201ENST00000231130 JDP2Q8WYK2 163 aa14.88□□□□□ -0.03
PCDHB3-201ENST00000231130 TMEM121Q9BTD3 319 aa14.88□□□□□ -0.03
PCDHB3-201ENST00000231130 NDE1Q9NXR1 346 aa14.88□□□□□ -0.03
PCDHB3-201ENST00000231130 ANGPTL2Q9UKU9 493 aa14.88□□□□□ -0.03
PCDHB3-201ENST00000231130 FAF1Q9UNN5 650 aaPredicted RBP14.88□□□□□ -0.03
PCDHB3-201ENST00000231130 GAKO14976 1311 aa14.88□□□□□ -0.03
PCDHB3-201ENST00000231130 BOLA2-SMG1P6H3BVE0 249 aa14.87□□□□□ -0.03
PCDHB3-201ENST00000231130 DNAJC6O75061 913 aa14.87□□□□□ -0.03
PCDHB3-201ENST00000231130 ATP6V1B1P15313 513 aa14.87□□□□□ -0.03
PCDHB3-201ENST00000231130 PAX3P23760 479 aa14.87□□□□□ -0.03
PCDHB3-201ENST00000231130 MTMR2Q13614 643 aa14.87□□□□□ -0.03
PCDHB3-201ENST00000231130 MOGSQ13724 837 aa14.87□□□□□ -0.03
PCDHB3-201ENST00000231130 KCTD21Q4G0X4 260 aa14.87□□□□□ -0.03
PCDHB3-201ENST00000231130 CLNKQ7Z7G1 428 aa14.87□□□□□ -0.03
PCDHB3-201ENST00000231130 C10orf82Q8WW14 230 aa14.87□□□□□ -0.03
PCDHB3-201ENST00000231130 ACCSQ96QU6 501 aa14.87□□□□□ -0.03
PCDHB3-201ENST00000231130 HOMER2Q9NSB8 354 aa14.87□□□□□ -0.03
PCDHB3-201ENST00000231130 SLC17A7Q9P2U7 560 aa14.87□□□□□ -0.03
PCDHB3-201ENST00000231130 MARCOQ9UEW3 520 aaPredicted RBP14.87□□□□□ -0.03
PCDHB3-201ENST00000231130 IGLV3-22A0A075B6J6 115 aa14.87□□□□□ -0.03
PCDHB3-201ENST00000231130 SPDYE16A6NNV3 312 aaPredicted RBP14.87□□□□□ -0.03
PCDHB3-201ENST00000231130 CA8P35219 290 aa14.87□□□□□ -0.03
PCDHB3-201ENST00000231130 CDK7P50613 346 aa14.87□□□□□ -0.03
PCDHB3-201ENST00000231130 PLA2G4FQ68DD2 849 aa14.87□□□□□ -0.03
PCDHB3-201ENST00000231130 CRYGNQ8WXF5 182 aa14.87□□□□□ -0.03
PCDHB3-201ENST00000231130 PRR12Q9ULL5 1215 aa14.87□□□□□ -0.03
PCDHB3-201ENST00000231130 PSMD10O75832 226 aa14.87□□□□□ -0.03
PCDHB3-201ENST00000231130 CIB2O75838 187 aa14.87□□□□□ -0.03
PCDHB3-201ENST00000231130 AMPD1P23109 780 aa14.87□□□□□ -0.03
PCDHB3-201ENST00000231130 GJA8P48165 433 aa14.87□□□□□ -0.03
PCDHB3-201ENST00000231130 HADHBP55084 474 aaKnown RBP14.87□□□□□ -0.03
PCDHB3-201ENST00000231130 PDE1CQ14123 709 aaPredicted RBP14.87□□□□□ -0.03
PCDHB3-201ENST00000231130 TFDP1Q14186 410 aa14.87□□□□□ -0.03
PCDHB3-201ENST00000231130 ABCB5Q2M3G0 1257 aa14.87□□□□□ -0.03
PCDHB3-201ENST00000231130 OLFML1Q6UWY5 402 aa14.87□□□□□ -0.03
PCDHB3-201ENST00000231130 TCP10LQ8TDR4 215 aa14.87□□□□□ -0.03
PCDHB3-201ENST00000231130 TEKT1Q969V4 418 aa14.87□□□□□ -0.03
PCDHB3-201ENST00000231130 CATSPER2Q96P56 530 aa14.87□□□□□ -0.03
PCDHB3-201ENST00000231130 TUFT1Q9NNX1 390 aa14.87□□□□□ -0.03
PCDHB3-201ENST00000231130 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.87□□□□□ -0.03
PCDHB3-201ENST00000231130 DOT1LQ8TEK3 1739 aa14.86□□□□□ -0.03
PCDHB3-201ENST00000231130 DKC1O60832 514 aaKnown RBP eCLIP14.86□□□□□ -0.03
PCDHB3-201ENST00000231130 HARSP12081 509 aaKnown RBP14.86□□□□□ -0.03
PCDHB3-201ENST00000231130 KDSRQ06136 332 aa14.86□□□□□ -0.03
PCDHB3-201ENST00000231130 ACVR2BQ13705 512 aa14.86□□□□□ -0.03
PCDHB3-201ENST00000231130 PDK4Q16654 411 aa14.86□□□□□ -0.03
PCDHB3-201ENST00000231130 BBS9Q3SYG4 887 aa14.86□□□□□ -0.03
PCDHB3-201ENST00000231130 CEP55Q53EZ4 464 aa14.86□□□□□ -0.03
PCDHB3-201ENST00000231130 MORC4Q8TE76 937 aa14.86□□□□□ -0.03
PCDHB3-201ENST00000231130 FAM163AQ96GL9 167 aaPredicted RBP14.86□□□□□ -0.03
PCDHB3-201ENST00000231130 CLPTM1LQ96KA5 538 aa14.86□□□□□ -0.03
PCDHB3-201ENST00000231130 BTBD10Q9BSF8 475 aa14.86□□□□□ -0.03
PCDHB3-201ENST00000231130 PFDN4Q9NQP4 134 aa14.86□□□□□ -0.03
PCDHB3-201ENST00000231130 KRT82Q9NSB4 513 aa14.86□□□□□ -0.03
PCDHB3-201ENST00000231130 A0A0J9YVX5 310 aa14.86□□□□□ -0.03
PCDHB3-201ENST00000231130 GSC2O15499 205 aa14.86□□□□□ -0.03
PCDHB3-201ENST00000231130 FDX1P10109 184 aa14.86□□□□□ -0.03
PCDHB3-201ENST00000231130 ARFIP2P53365 341 aa14.86□□□□□ -0.03
PCDHB3-201ENST00000231130 IGBP1P78318 339 aa14.86□□□□□ -0.03
PCDHB3-201ENST00000231130 MED21Q13503 144 aa14.86□□□□□ -0.03
PCDHB3-201ENST00000231130 CYLC2Q14093 348 aaPredicted RBP14.86□□□□□ -0.03
PCDHB3-201ENST00000231130 ZNF568Q3ZCX4 644 aa14.86□□□□□ -0.03
PCDHB3-201ENST00000231130 KRT39Q6A163 491 aa14.86□□□□□ -0.03
PCDHB3-201ENST00000231130 MOXD1Q6UVY6 613 aa14.86□□□□□ -0.03
PCDHB3-201ENST00000231130 SIAH1Q8IUQ4 282 aa14.86□□□□□ -0.03
PCDHB3-201ENST00000231130 C12orf50Q8NA57 414 aaPredicted RBP14.86□□□□□ -0.03
PCDHB3-201ENST00000231130 TEKT3Q9BXF9 490 aa14.86□□□□□ -0.03
PCDHB3-201ENST00000231130 GINM1Q9NU53 330 aa14.86□□□□□ -0.03
PCDHB3-201ENST00000231130 SEL1LQ9UBV2 794 aa14.86□□□□□ -0.03
PCDHB3-201ENST00000231130 MROH7Q68CQ1 1323 aa14.86□□□□□ -0.03
PCDHB3-201ENST00000231130 RNASEH1O60930 286 aaKnown RBP14.85□□□□□ -0.03
PCDHB3-201ENST00000231130 POLR2MP0CAP2 368 aa14.85□□□□□ -0.03
PCDHB3-201ENST00000231130 GCAP28676 217 aa14.85□□□□□ -0.03
PCDHB3-201ENST00000231130 CCDC15Q0P6D6 951 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms