RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 PTK6Q13882 451 aa12.05□□□□□ -0.48
LAMA4-201ENST00000230538 RABL6Q3YEC7 729 aaPredicted RBP12.05□□□□□ -0.48
LAMA4-201ENST00000230538 CDC42EP5Q6NZY7 148 aa12.05□□□□□ -0.48
LAMA4-201ENST00000230538 ZNF677Q86XU0 584 aa12.05□□□□□ -0.48
LAMA4-201ENST00000230538 HS6ST3Q8IZP7 471 aa12.05□□□□□ -0.48
LAMA4-201ENST00000230538 TNIP2Q8NFZ5 429 aa12.05□□□□□ -0.48
LAMA4-201ENST00000230538 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.05□□□□□ -0.48
LAMA4-201ENST00000230538 FAM107AO95990 144 aa12.05□□□□□ -0.48
LAMA4-201ENST00000230538 IMPDH2P12268 514 aa12.05□□□□□ -0.48
LAMA4-201ENST00000230538 TAF1CQ15572 869 aaPredicted RBP12.05□□□□□ -0.48
LAMA4-201ENST00000230538 SGO1Q5FBB7 561 aa12.05□□□□□ -0.48
LAMA4-201ENST00000230538 CYP4A22Q5TCH4 519 aa12.05□□□□□ -0.48
LAMA4-201ENST00000230538 CRAMP1Q96RY5 1269 aa12.05□□□□□ -0.48
LAMA4-201ENST00000230538 GPR63Q9BZJ6 419 aa12.05□□□□□ -0.48
LAMA4-201ENST00000230538 IL1RL2Q9HB29 575 aa12.05□□□□□ -0.48
LAMA4-201ENST00000230538 MRGBPQ9NV56 204 aa12.05□□□□□ -0.48
LAMA4-201ENST00000230538 CHORDC1Q9UHD1 332 aaPredicted RBP12.05□□□□□ -0.48
LAMA4-201ENST00000230538 GRID1Q9ULK0 1009 aa12.05□□□□□ -0.48
LAMA4-201ENST00000230538 TMEM120BA0PK00 339 aa12.05□□□□□ -0.48
LAMA4-201ENST00000230538 DGKIO75912 1065 aa12.05□□□□□ -0.48
LAMA4-201ENST00000230538 PDHBP11177 359 aa12.05□□□□□ -0.48
LAMA4-201ENST00000230538 EFHC1Q5JVL4 640 aa12.05□□□□□ -0.48
LAMA4-201ENST00000230538 DAB2IPQ5VWQ8 1189 aa12.05□□□□□ -0.48
LAMA4-201ENST00000230538 GOLPH3Q9H4A6 298 aa12.05□□□□□ -0.48
LAMA4-201ENST00000230538 MANSC1Q9H8J5 431 aa12.05□□□□□ -0.48
LAMA4-201ENST00000230538 EPB41L4AQ9HCS5 686 aaPredicted RBP12.05□□□□□ -0.48
LAMA4-201ENST00000230538 RIC8BQ9NVN3 520 aa12.05□□□□□ -0.48
LAMA4-201ENST00000230538 ZNF70Q9UC06 446 aaPredicted RBP12.05□□□□□ -0.48
LAMA4-201ENST00000230538 IGSF9BQ9UPX0 1349 aa12.05□□□□□ -0.48
LAMA4-201ENST00000230538 SMAPO00193 183 aa12.04□□□□□ -0.48
LAMA4-201ENST00000230538 CST8O60676 142 aa12.04□□□□□ -0.48
LAMA4-201ENST00000230538 PCSK1P29120 753 aa12.04□□□□□ -0.48
LAMA4-201ENST00000230538 TRPM8Q7Z2W7 1104 aa12.04□□□□□ -0.48
LAMA4-201ENST00000230538 RIBC1Q8N443 379 aaPredicted RBP12.04□□□□□ -0.48
LAMA4-201ENST00000230538 FEZF2Q8TBJ5 459 aa12.04□□□□□ -0.48
LAMA4-201ENST00000230538 INPP5DQ92835 1189 aa12.04□□□□□ -0.48
LAMA4-201ENST00000230538 PI4K2AQ9BTU6 479 aa12.04□□□□□ -0.48
LAMA4-201ENST00000230538 PSMD14O00487 310 aa12.04□□□□□ -0.48
LAMA4-201ENST00000230538 CHI3L2Q15782 390 aa12.04□□□□□ -0.48
LAMA4-201ENST00000230538 C4orf22Q6V702 233 aa12.04□□□□□ -0.48
LAMA4-201ENST00000230538 PPIL6Q8IXY8 311 aa12.04□□□□□ -0.48
LAMA4-201ENST00000230538 KIF2BQ8N4N8 673 aa12.04□□□□□ -0.48
LAMA4-201ENST00000230538 PARK7Q99497 189 aaKnown RBP12.04□□□□□ -0.48
LAMA4-201ENST00000230538 KLF6Q99612 283 aaPredicted RBP12.04□□□□□ -0.48
LAMA4-201ENST00000230538 HPS4Q9NQG7 708 aa12.04□□□□□ -0.48
LAMA4-201ENST00000230538 REREQ9P2R6 1566 aa12.04□□□□□ -0.48
LAMA4-201ENST00000230538 BRD2P25440 801 aaKnown RBP12.04□□□□□ -0.48
LAMA4-201ENST00000230538 OR1G1P47890 313 aa12.04□□□□□ -0.48
LAMA4-201ENST00000230538 HARS2P49590 506 aaKnown RBP12.04□□□□□ -0.48
LAMA4-201ENST00000230538 MTFR1Q15390 333 aa12.04□□□□□ -0.48
LAMA4-201ENST00000230538 AASDHQ4L235 1098 aaPredicted RBP12.04□□□□□ -0.48
LAMA4-201ENST00000230538 DDX42Q86XP3 938 aaKnown RBP eCLIP12.04□□□□□ -0.48
LAMA4-201ENST00000230538 LRRC71Q8N4P6 559 aa12.04□□□□□ -0.48
LAMA4-201ENST00000230538 FAM71DQ8N9W8 422 aa12.04□□□□□ -0.48
LAMA4-201ENST00000230538 ANKRD7Q92527 254 aa12.04□□□□□ -0.48
LAMA4-201ENST00000230538 PPP2R3CQ969Q6 453 aa12.04□□□□□ -0.48
LAMA4-201ENST00000230538 WNK4Q96J92 1243 aa12.04□□□□□ -0.48
LAMA4-201ENST00000230538 PXDNLA1KZ92 1463 aa12.04□□□□□ -0.48
LAMA4-201ENST00000230538 PRR23D1E9PI22 279 aaPredicted RBP12.04□□□□□ -0.48
LAMA4-201ENST00000230538 ENTPD3O75355 529 aa12.04□□□□□ -0.48
LAMA4-201ENST00000230538 RHOBTB1O94844 696 aa12.04□□□□□ -0.48
LAMA4-201ENST00000230538 CTDNEP1O95476 244 aa12.04□□□□□ -0.48
LAMA4-201ENST00000230538 PRR23D2P0DMB1 279 aaPredicted RBP12.04□□□□□ -0.48
LAMA4-201ENST00000230538 NCAM1P13591 858 aa12.04□□□□□ -0.48
LAMA4-201ENST00000230538 CHRM3P20309 590 aa12.04□□□□□ -0.48
LAMA4-201ENST00000230538 KCNA3P22001 575 aa12.04□□□□□ -0.48
LAMA4-201ENST00000230538 ZFP42Q96MM3 310 aa12.04□□□□□ -0.48
LAMA4-201ENST00000230538 OLFML3Q9NRN5 406 aa12.04□□□□□ -0.48
LAMA4-201ENST00000230538 CDY2AQ9Y6F7 541 aa12.04□□□□□ -0.48
LAMA4-201ENST00000230538 CDY1Q9Y6F8 540 aa12.04□□□□□ -0.48
LAMA4-201ENST00000230538 NPTXRO95502 500 aa12.04□□□□□ -0.48
LAMA4-201ENST00000230538 HPCAP84074 193 aa12.04□□□□□ -0.48
LAMA4-201ENST00000230538 USP49Q70CQ1 688 aa12.04□□□□□ -0.48
LAMA4-201ENST00000230538 HES6Q96HZ4 224 aa12.04□□□□□ -0.48
LAMA4-201ENST00000230538 NIF3L1Q9GZT8 377 aa12.04□□□□□ -0.48
LAMA4-201ENST00000230538 SYTL2Q9HCH5 934 aa12.04□□□□□ -0.48
LAMA4-201ENST00000230538 SERPINI2O75830 405 aa12.03□□□□□ -0.48
LAMA4-201ENST00000230538 MTM1Q13496 603 aa12.03□□□□□ -0.48
LAMA4-201ENST00000230538 TEX9Q8N6V9 391 aa12.03□□□□□ -0.48
LAMA4-201ENST00000230538 TFB1MQ8WVM0 346 aaKnown RBP12.03□□□□□ -0.48
LAMA4-201ENST00000230538 E2F7Q96AV8 911 aa12.03□□□□□ -0.48
LAMA4-201ENST00000230538 VCPKMTQ9H867 229 aa12.03□□□□□ -0.48
LAMA4-201ENST00000230538 TUBE1Q9UJT0 475 aa12.03□□□□□ -0.48
LAMA4-201ENST00000230538 CNTNAP5Q8WYK1 1306 aa12.03□□□□□ -0.48
LAMA4-201ENST00000230538 B2RBV5 119 aa12.03□□□□□ -0.48
LAMA4-201ENST00000230538 PPP1R3GB7ZBB8 358 aa12.03□□□□□ -0.48
LAMA4-201ENST00000230538 CFAP99D6REC4 459 aa12.03□□□□□ -0.48
LAMA4-201ENST00000230538 GUCA1CO95843 209 aa12.03□□□□□ -0.48
LAMA4-201ENST00000230538 PLOD1Q02809 727 aaPredicted RBP12.03□□□□□ -0.48
LAMA4-201ENST00000230538 ACSF2Q96CM8 615 aaPredicted RBP12.03□□□□□ -0.48
LAMA4-201ENST00000230538 GIMAP4Q9NUV9 329 aa12.03□□□□□ -0.48
LAMA4-201ENST00000230538 PRMT7Q9NVM4 692 aaPredicted RBP12.03□□□□□ -0.48
LAMA4-201ENST00000230538 GEMIN4P57678 1058 aaKnown RBP12.03□□□□□ -0.48
LAMA4-201ENST00000230538 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.03□□□□□ -0.48
LAMA4-201ENST00000230538 EFL1Q7Z2Z2 1120 aaKnown RBP12.03□□□□□ -0.48
LAMA4-201ENST00000230538 USP38Q8NB14 1042 aa12.03□□□□□ -0.48
LAMA4-201ENST00000230538 HPDLQ96IR7 371 aa12.03□□□□□ -0.48
LAMA4-201ENST00000230538 BRD8Q9H0E9 1235 aa12.03□□□□□ -0.48
LAMA4-201ENST00000230538 SLC39A10Q9ULF5 831 aa12.03□□□□□ -0.48
LAMA4-201ENST00000230538 DTNAQ9Y4J8 743 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms