RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 DYDC2Q96IM9 177 aa21.74■■□□□ 1.07
SNX3-201ENST00000230085 PPCSQ9HAB8 311 aa21.74■■□□□ 1.07
SNX3-201ENST00000230085 SEPT11Q9NVA2 429 aaKnown RBP21.74■■□□□ 1.07
SNX3-201ENST00000230085 L3MBTL1Q9Y468 752 aa21.74■■□□□ 1.07
SNX3-201ENST00000230085 NOP56O00567 594 aaKnown RBP21.74■■□□□ 1.07
SNX3-201ENST00000230085 SPOPO43791 374 aa21.74■■□□□ 1.07
SNX3-201ENST00000230085 LRRN2O75325 713 aa21.74■■□□□ 1.07
SNX3-201ENST00000230085 SMNDC1O75940 238 aaKnown RBP eCLIP21.74■■□□□ 1.07
SNX3-201ENST00000230085 MMP3P08254 477 aa21.74■■□□□ 1.07
SNX3-201ENST00000230085 BRAFP15056 766 aa21.74■■□□□ 1.07
SNX3-201ENST00000230085 ATP2A2P16615 1042 aaKnown RBP21.74■■□□□ 1.07
SNX3-201ENST00000230085 SLC1A1P43005 524 aa21.74■■□□□ 1.07
SNX3-201ENST00000230085 CPT1AP50416 773 aa21.74■■□□□ 1.07
SNX3-201ENST00000230085 SATB1Q01826 763 aa21.74■■□□□ 1.07
SNX3-201ENST00000230085 PPARDQ03181 441 aa21.74■■□□□ 1.07
SNX3-201ENST00000230085 CDCA2Q69YH5 1023 aaPredicted RBP21.74■■□□□ 1.07
SNX3-201ENST00000230085 CGB2Q6NT52 195 aa21.74■■□□□ 1.07
SNX3-201ENST00000230085 NOP9Q86U38 636 aaKnown RBP21.74■■□□□ 1.07
SNX3-201ENST00000230085 GPR20Q99678 358 aa21.74■■□□□ 1.07
SNX3-201ENST00000230085 DDX23Q9BUQ8 820 aaKnown RBP21.74■■□□□ 1.07
SNX3-201ENST00000230085 NUP85Q9BW27 656 aa21.74■■□□□ 1.07
SNX3-201ENST00000230085 TEKT3Q9BXF9 490 aa21.74■■□□□ 1.07
SNX3-201ENST00000230085 SFI1A8K8P3 1242 aa21.73■■□□□ 1.07
SNX3-201ENST00000230085 TRAFD1O14545 582 aaPredicted RBP21.73■■□□□ 1.07
SNX3-201ENST00000230085 CALRP27797 417 aaKnown RBP21.73■■□□□ 1.07
SNX3-201ENST00000230085 FMO1Q01740 532 aa21.73■■□□□ 1.07
SNX3-201ENST00000230085 CDR2Q01850 454 aa21.73■■□□□ 1.07
SNX3-201ENST00000230085 MPP2Q14168 576 aa21.73■■□□□ 1.07
SNX3-201ENST00000230085 KCNA10Q16322 511 aa21.73■■□□□ 1.07
SNX3-201ENST00000230085 SGO2Q562F6 1265 aa21.73■■□□□ 1.07
SNX3-201ENST00000230085 CCSAPQ6IQ19 270 aaPredicted RBP21.73■■□□□ 1.07
SNX3-201ENST00000230085 ARRDC4Q8NCT1 418 aa21.73■■□□□ 1.07
SNX3-201ENST00000230085 PIGOQ8TEQ8 1089 aa21.73■■□□□ 1.07
SNX3-201ENST00000230085 TGS1Q96RS0 853 aaKnown RBP21.73■■□□□ 1.07
SNX3-201ENST00000230085 UNC45AQ9H3U1 944 aa21.73■■□□□ 1.07
SNX3-201ENST00000230085 LRRC42Q9Y546 428 aa21.73■■□□□ 1.07
SNX3-201ENST00000230085 CCDC85CA6NKD9 419 aa21.72■■□□□ 1.07
SNX3-201ENST00000230085 CHMP2AO43633 222 aa21.72■■□□□ 1.07
SNX3-201ENST00000230085 RPSAP08865 295 aaKnown RBP21.72■■□□□ 1.07
SNX3-201ENST00000230085 EN2P19622 333 aaPredicted RBP21.72■■□□□ 1.07
SNX3-201ENST00000230085 TAC1P20366 129 aa21.72■■□□□ 1.07
SNX3-201ENST00000230085 CST5P28325 142 aaPredicted RBP21.72■■□□□ 1.07
SNX3-201ENST00000230085 ACTR2P61160 394 aa21.72■■□□□ 1.07
SNX3-201ENST00000230085 PPP3CAQ08209 521 aa21.72■■□□□ 1.07
SNX3-201ENST00000230085 DAW1Q8N136 415 aa21.72■■□□□ 1.07
SNX3-201ENST00000230085 ANKLE1Q8NAG6 615 aa21.72■■□□□ 1.07
SNX3-201ENST00000230085 CCDC77Q9BR77 488 aa21.72■■□□□ 1.07
SNX3-201ENST00000230085 TIPINQ9BVW5 301 aa21.72■■□□□ 1.07
SNX3-201ENST00000230085 IKZF4Q9H2S9 585 aa21.72■■□□□ 1.07
SNX3-201ENST00000230085 NKIRAS1Q9NYS0 192 aa21.72■■□□□ 1.07
SNX3-201ENST00000230085 NINJ2Q9NZG7 142 aa21.72■■□□□ 1.07
SNX3-201ENST00000230085 GSTTP1A0A1W2PQM5 241 aa21.71■■□□□ 1.07
SNX3-201ENST00000230085 PRPF4O43172 522 aaKnown RBP eCLIP21.71■■□□□ 1.07
SNX3-201ENST00000230085 PAX7P23759 505 aa21.71■■□□□ 1.07
SNX3-201ENST00000230085 CCDC38Q502W7 563 aa21.71■■□□□ 1.07
SNX3-201ENST00000230085 TPH2Q8IWU9 490 aa21.71■■□□□ 1.07
SNX3-201ENST00000230085 ENDOVQ8N8Q3 282 aaKnown RBP21.71■■□□□ 1.07
SNX3-201ENST00000230085 SLC17A8Q8NDX2 589 aa21.71■■□□□ 1.07
SNX3-201ENST00000230085 SEPT1Q8WYJ6 367 aa21.71■■□□□ 1.07
SNX3-201ENST00000230085 SENP1Q9P0U3 644 aa21.71■■□□□ 1.07
SNX3-201ENST00000230085 HNRNPCL1O60812 293 aaKnown RBP21.71■■□□□ 1.07
SNX3-201ENST00000230085 DIAPH2O60879 1101 aa21.71■■□□□ 1.07
SNX3-201ENST00000230085 ASGR1P07306 291 aa21.71■■□□□ 1.07
SNX3-201ENST00000230085 STX2P32856 288 aa21.71■■□□□ 1.07
SNX3-201ENST00000230085 TCF7P36402 384 aaPredicted RBP21.71■■□□□ 1.07
SNX3-201ENST00000230085 MNX1P50219 401 aaPredicted RBP21.71■■□□□ 1.07
SNX3-201ENST00000230085 MFAP3P55082 362 aa21.71■■□□□ 1.07
SNX3-201ENST00000230085 IL9RQ01113 521 aa21.71■■□□□ 1.07
SNX3-201ENST00000230085 KRT76Q01546 638 aa21.71■■□□□ 1.07
SNX3-201ENST00000230085 MGAT5Q09328 741 aa21.71■■□□□ 1.07
SNX3-201ENST00000230085 DGKDQ16760 1214 aa21.71■■□□□ 1.07
SNX3-201ENST00000230085 BRDTQ58F21 947 aaPredicted RBP21.71■■□□□ 1.07
SNX3-201ENST00000230085 ANKRD20A2Q5SQ80 823 aa21.71■■□□□ 1.07
SNX3-201ENST00000230085 ANKRD20A1Q5TYW2 823 aa21.71■■□□□ 1.07
SNX3-201ENST00000230085 ANKRD20A3Q5VUR7 823 aa21.71■■□□□ 1.07
SNX3-201ENST00000230085 ZNF746Q6NUN9 644 aaPredicted RBP21.71■■□□□ 1.07
SNX3-201ENST00000230085 ATL2Q8NHH9 583 aa21.71■■□□□ 1.07
SNX3-201ENST00000230085 THOC1Q96FV9 657 aaKnown RBP21.71■■□□□ 1.07
SNX3-201ENST00000230085 ACCSQ96QU6 501 aa21.71■■□□□ 1.07
SNX3-201ENST00000230085 DCLK3Q9C098 648 aa21.71■■□□□ 1.07
SNX3-201ENST00000230085 CCDC113Q9H0I3 377 aa21.71■■□□□ 1.07
SNX3-201ENST00000230085 A6NHS1 94 aa21.7■■□□□ 1.06
SNX3-201ENST00000230085 MYBL1P10243 752 aa21.7■■□□□ 1.06
SNX3-201ENST00000230085 GNAZP19086 355 aa21.7■■□□□ 1.06
SNX3-201ENST00000230085 GPC3P51654 580 aa21.7■■□□□ 1.06
SNX3-201ENST00000230085 POLGP54098 1239 aaPredicted RBP21.7■■□□□ 1.06
SNX3-201ENST00000230085 ACAD10Q6JQN1 1059 aa21.7■■□□□ 1.06
SNX3-201ENST00000230085 ECHDC2Q86YB7 292 aa21.7■■□□□ 1.06
SNX3-201ENST00000230085 XXYLT1Q8NBI6 393 aa21.7■■□□□ 1.06
SNX3-201ENST00000230085 MAML1Q92585 1016 aa21.7■■□□□ 1.06
SNX3-201ENST00000230085 RMDN2Q96LZ7 410 aa21.7■■□□□ 1.06
SNX3-201ENST00000230085 LARSQ9P2J5 1176 aaKnown RBP21.7■■□□□ 1.06
SNX3-201ENST00000230085 TCEAL9Q9UHQ7 104 aa21.7■■□□□ 1.06
SNX3-201ENST00000230085 FAM47DPA6NHR8 397 aa21.69■■□□□ 1.06
SNX3-201ENST00000230085 ATG7O95352 703 aa21.69■■□□□ 1.06
SNX3-201ENST00000230085 ACSL3O95573 720 aa21.69■■□□□ 1.06
SNX3-201ENST00000230085 MYL3P08590 195 aa21.69■■□□□ 1.06
SNX3-201ENST00000230085 HOXD8P13378 290 aaPredicted RBP21.69■■□□□ 1.06
SNX3-201ENST00000230085 CREB1P16220 341 aa21.69■■□□□ 1.06
SNX3-201ENST00000230085 CHKAP35790 457 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms