RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 GABRDO14764 452 aa13.59□□□□□ -0.23
LSM5-201ENST00000223084 ATP2C2O75185 946 aa13.59□□□□□ -0.23
LSM5-201ENST00000223084 LRRN2O75325 713 aa13.59□□□□□ -0.23
LSM5-201ENST00000223084 HLA-DRAP01903 254 aa13.59□□□□□ -0.23
LSM5-201ENST00000223084 PDGFRBP09619 1106 aa13.59□□□□□ -0.23
LSM5-201ENST00000223084 LMO2P25791 158 aa13.59□□□□□ -0.23
LSM5-201ENST00000223084 ATICP31939 592 aa13.59□□□□□ -0.23
LSM5-201ENST00000223084 PPP1R2P41236 205 aa13.59□□□□□ -0.23
LSM5-201ENST00000223084 PIK3CAP42336 1068 aa13.59□□□□□ -0.23
LSM5-201ENST00000223084 TNNC1P63316 161 aa13.59□□□□□ -0.23
LSM5-201ENST00000223084 TSPY1Q01534 308 aa13.59□□□□□ -0.23
LSM5-201ENST00000223084 ZNF699Q32M78 642 aa13.59□□□□□ -0.23
LSM5-201ENST00000223084 SPOPLQ6IQ16 392 aa13.59□□□□□ -0.23
LSM5-201ENST00000223084 SCARA5Q6ZMJ2 495 aa13.59□□□□□ -0.23
LSM5-201ENST00000223084 GET4Q7L5D6 327 aaPredicted RBP13.59□□□□□ -0.23
LSM5-201ENST00000223084 TRIML1Q8N9V2 468 aa13.59□□□□□ -0.23
LSM5-201ENST00000223084 TDRD5Q8NAT2 981 aaKnown RBP13.59□□□□□ -0.23
LSM5-201ENST00000223084 TAS1R2Q8TE23 839 aa13.59□□□□□ -0.23
LSM5-201ENST00000223084 MYADMQ96S97 322 aa13.59□□□□□ -0.23
LSM5-201ENST00000223084 PI4K2AQ9BTU6 479 aa13.59□□□□□ -0.23
LSM5-201ENST00000223084 SMYD3Q9H7B4 428 aa13.59□□□□□ -0.23
LSM5-201ENST00000223084 CEP72Q9P209 647 aa13.59□□□□□ -0.23
LSM5-201ENST00000223084 NR2E1Q9Y466 385 aa13.59□□□□□ -0.23
LSM5-201ENST00000223084 YIPF1Q9Y548 306 aa13.59□□□□□ -0.23
LSM5-201ENST00000223084 NME7Q9Y5B8 376 aa13.59□□□□□ -0.23
LSM5-201ENST00000223084 GOLGA6L22H0YM25 854 aa13.58□□□□□ -0.24
LSM5-201ENST00000223084 SLC16A3O15427 465 aaKnown RBP13.58□□□□□ -0.24
LSM5-201ENST00000223084 STAU1O95793 577 aaKnown RBP13.58□□□□□ -0.24
LSM5-201ENST00000223084 RHOP08100 348 aa13.58□□□□□ -0.24
LSM5-201ENST00000223084 WARSP23381 471 aaKnown RBP13.58□□□□□ -0.24
LSM5-201ENST00000223084 FSHRP23945 695 aa13.58□□□□□ -0.24
LSM5-201ENST00000223084 GBP2P32456 591 aaPredicted RBP13.58□□□□□ -0.24
LSM5-201ENST00000223084 RAP1GAPP47736 663 aa13.58□□□□□ -0.24
LSM5-201ENST00000223084 LHX1P48742 406 aa13.58□□□□□ -0.24
LSM5-201ENST00000223084 CDH8P55286 799 aa13.58□□□□□ -0.24
LSM5-201ENST00000223084 PSMC1P62191 440 aaKnown RBP13.58□□□□□ -0.24
LSM5-201ENST00000223084 MYL7Q01449 175 aa13.58□□□□□ -0.24
LSM5-201ENST00000223084 PAK1Q13153 545 aa13.58□□□□□ -0.24
LSM5-201ENST00000223084 MGAT5BQ3V5L5 792 aa13.58□□□□□ -0.24
LSM5-201ENST00000223084 DCAF17Q5H9S7 520 aaPredicted RBP13.58□□□□□ -0.24
LSM5-201ENST00000223084 ZNF667Q5HYK9 610 aa13.58□□□□□ -0.24
LSM5-201ENST00000223084 INTS6LQ5JSJ4 861 aaKnown RBP13.58□□□□□ -0.24
LSM5-201ENST00000223084 TCERG1LQ5VWI1 586 aa13.58□□□□□ -0.24
LSM5-201ENST00000223084 RTL10Q7L3V2 364 aa13.58□□□□□ -0.24
LSM5-201ENST00000223084 DPH6Q7L8W6 267 aa13.58□□□□□ -0.24
LSM5-201ENST00000223084 DCP1BQ8IZD4 617 aaKnown RBP13.58□□□□□ -0.24
LSM5-201ENST00000223084 HS6ST3Q8IZP7 471 aa13.58□□□□□ -0.24
LSM5-201ENST00000223084 ST13P5Q8NFI4 369 aaPredicted RBP13.58□□□□□ -0.24
LSM5-201ENST00000223084 OR6B3Q8NGW1 331 aa13.58□□□□□ -0.24
LSM5-201ENST00000223084 ITFG1Q8TB96 612 aa13.58□□□□□ -0.24
LSM5-201ENST00000223084 PKMYT1Q99640 499 aa13.58□□□□□ -0.24
LSM5-201ENST00000223084 SEPT5Q99719 369 aaPredicted RBP13.58□□□□□ -0.24
LSM5-201ENST00000223084 ACBD6Q9BR61 282 aa13.58□□□□□ -0.24
LSM5-201ENST00000223084 CORO1BQ9BR76 489 aa13.58□□□□□ -0.24
LSM5-201ENST00000223084 SNX25Q9H3E2 840 aa13.58□□□□□ -0.24
LSM5-201ENST00000223084 EPHX3Q9H6B9 360 aa13.58□□□□□ -0.24
LSM5-201ENST00000223084 TMEM8AQ9HCN3 771 aa13.58□□□□□ -0.24
LSM5-201ENST00000223084 ABI2Q9NYB9 513 aaPredicted RBP13.58□□□□□ -0.24
LSM5-201ENST00000223084 LIMD1Q9UGP4 676 aa13.58□□□□□ -0.24
LSM5-201ENST00000223084 MUTYHQ9UIF7 546 aa13.58□□□□□ -0.24
LSM5-201ENST00000223084 GTF3C4Q9UKN8 822 aa13.58□□□□□ -0.24
LSM5-201ENST00000223084 MAFFQ9ULX9 164 aa13.58□□□□□ -0.24
LSM5-201ENST00000223084 BICDL2A1A5D9 508 aa13.57□□□□□ -0.24
LSM5-201ENST00000223084 MYBPHLA2RUH7 354 aa13.57□□□□□ -0.24
LSM5-201ENST00000223084 NRG2O14511 850 aaPredicted RBP13.57□□□□□ -0.24
LSM5-201ENST00000223084 POU2F2P09086 479 aa13.57□□□□□ -0.24
LSM5-201ENST00000223084 PTPN2P17706 415 aa13.57□□□□□ -0.24
LSM5-201ENST00000223084 PCSK1P29120 753 aa13.57□□□□□ -0.24
LSM5-201ENST00000223084 GNL1P36915 607 aaPredicted RBP13.57□□□□□ -0.24
LSM5-201ENST00000223084 MCCD1P59942 119 aaPredicted RBP13.57□□□□□ -0.24
LSM5-201ENST00000223084 ENPEPQ07075 957 aa13.57□□□□□ -0.24
LSM5-201ENST00000223084 SLC5A9Q2M3M2 681 aa13.57□□□□□ -0.24
LSM5-201ENST00000223084 SGSM1Q2NKQ1 1148 aa13.57□□□□□ -0.24
LSM5-201ENST00000223084 CCDC40Q4G0X9 1142 aa13.57□□□□□ -0.24
LSM5-201ENST00000223084 PABPC1LQ4VXU2 614 aaKnown RBP13.57□□□□□ -0.24
LSM5-201ENST00000223084 OTOP3Q7RTS5 596 aa13.57□□□□□ -0.24
LSM5-201ENST00000223084 FILIP1Q7Z7B0 1213 aa13.57□□□□□ -0.24
LSM5-201ENST00000223084 SPATA18Q8TC71 538 aa13.57□□□□□ -0.24
LSM5-201ENST00000223084 ING5Q8WYH8 240 aa13.57□□□□□ -0.24
LSM5-201ENST00000223084 SEMA4DQ92854 862 aa13.57□□□□□ -0.24
LSM5-201ENST00000223084 ACSF2Q96CM8 615 aaPredicted RBP13.57□□□□□ -0.24
LSM5-201ENST00000223084 TCEAL4Q96EI5 215 aa13.57□□□□□ -0.24
LSM5-201ENST00000223084 CEP63Q96MT8 703 aa13.57□□□□□ -0.24
LSM5-201ENST00000223084 LPIN3Q9BQK8 851 aa13.57□□□□□ -0.24
LSM5-201ENST00000223084 SYT15Q9BQS2 421 aa13.57□□□□□ -0.24
LSM5-201ENST00000223084 SRRTQ9BXP5 876 aaKnown RBP13.57□□□□□ -0.24
LSM5-201ENST00000223084 SDCBP2Q9H190 292 aa13.57□□□□□ -0.24
LSM5-201ENST00000223084 DNAJC25Q9H1X3 360 aa13.57□□□□□ -0.24
LSM5-201ENST00000223084 DPEP3Q9H4B8 488 aa13.57□□□□□ -0.24
LSM5-201ENST00000223084 VRTNQ9H8Y1 702 aa13.57□□□□□ -0.24
LSM5-201ENST00000223084 APOBEC3GQ9HC16 384 aaKnown RBP13.57□□□□□ -0.24
LSM5-201ENST00000223084 USTQ9Y2C2 406 aa13.57□□□□□ -0.24
LSM5-201ENST00000223084 PCDHB5Q9Y5E4 795 aa13.57□□□□□ -0.24
LSM5-201ENST00000223084 TACC1O75410 805 aa13.56□□□□□ -0.24
LSM5-201ENST00000223084 ASS1P00966 412 aaKnown RBP13.56□□□□□ -0.24
LSM5-201ENST00000223084 ASGR2P07307 311 aa13.56□□□□□ -0.24
LSM5-201ENST00000223084 HAPLN1P10915 354 aaPredicted RBP13.56□□□□□ -0.24
LSM5-201ENST00000223084 GTF2H1P32780 548 aa13.56□□□□□ -0.24
LSM5-201ENST00000223084 ALDH1A3P47895 512 aa13.56□□□□□ -0.24
LSM5-201ENST00000223084 GPR15P49685 360 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms