RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 SPAG6O75602 509 aa19.78■□□□□ 0.76
SMPD3-201ENST00000219334 ZNF200P98182 395 aaPredicted RBP19.78■□□□□ 0.76
SMPD3-201ENST00000219334 RRAGCQ9HB90 399 aa19.78■□□□□ 0.76
SMPD3-201ENST00000219334 SENP2Q9HC62 589 aa19.78■□□□□ 0.76
SMPD3-201ENST00000219334 ALG13Q9NP73 1137 aaKnown RBP19.78■□□□□ 0.76
SMPD3-201ENST00000219334 SMG5Q9UPR3 1016 aaKnown RBP19.78■□□□□ 0.76
SMPD3-201ENST00000219334 THP07101 528 aa19.77■□□□□ 0.76
SMPD3-201ENST00000219334 TMEM253P0C7T8 217 aa19.77■□□□□ 0.76
SMPD3-201ENST00000219334 FMR1Q06787 632 aaKnown RBP eCLIP19.77■□□□□ 0.76
SMPD3-201ENST00000219334 FLOT2Q14254 428 aa19.77■□□□□ 0.76
SMPD3-201ENST00000219334 RFWD2Q8NHY2 731 aa19.77■□□□□ 0.76
SMPD3-201ENST00000219334 APOL5Q9BWW9 433 aa19.77■□□□□ 0.76
SMPD3-201ENST00000219334 AGPAT3Q9NRZ7 376 aa19.77■□□□□ 0.76
SMPD3-201ENST00000219334 ITIH6Q6UXX5 1313 aa19.77■□□□□ 0.76
SMPD3-201ENST00000219334 LZTS3O60299 673 aaPredicted RBP19.77■□□□□ 0.76
SMPD3-201ENST00000219334 DDNO94850 711 aaPredicted RBP19.77■□□□□ 0.76
SMPD3-201ENST00000219334 ELAVL2Q12926 359 aaKnown RBP19.77■□□□□ 0.76
SMPD3-201ENST00000219334 CUL3Q13618 768 aa19.77■□□□□ 0.76
SMPD3-201ENST00000219334 LINC00523Q86TU6 105 aa19.77■□□□□ 0.76
SMPD3-201ENST00000219334 CHP1Q99653 195 aa19.77■□□□□ 0.76
SMPD3-201ENST00000219334 SPHKAPQ2M3C7 1700 aa19.77■□□□□ 0.76
SMPD3-201ENST00000219334 AMPD2Q01433 879 aa19.77■□□□□ 0.76
SMPD3-201ENST00000219334 MED21Q13503 144 aa19.77■□□□□ 0.76
SMPD3-201ENST00000219334 EHD4Q9H223 541 aa19.77■□□□□ 0.76
SMPD3-201ENST00000219334 STOML1Q9UBI4 398 aa19.77■□□□□ 0.76
SMPD3-201ENST00000219334 HSPA9P38646 679 aaKnown RBP19.77■□□□□ 0.75
SMPD3-201ENST00000219334 EPHB3P54753 998 aa19.77■□□□□ 0.75
SMPD3-201ENST00000219334 HIST2H2ACQ16777 129 aaPredicted RBP19.77■□□□□ 0.75
SMPD3-201ENST00000219334 SMTNL2Q2TAL5 461 aa19.77■□□□□ 0.75
SMPD3-201ENST00000219334 TTLL9Q3SXZ7 439 aa19.77■□□□□ 0.75
SMPD3-201ENST00000219334 MAP1SQ66K74 1059 aaPredicted RBP19.77■□□□□ 0.75
SMPD3-201ENST00000219334 HIST2H2AA3Q6FI13 130 aa19.77■□□□□ 0.75
SMPD3-201ENST00000219334 MOXD1Q6UVY6 613 aa19.77■□□□□ 0.75
SMPD3-201ENST00000219334 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.77■□□□□ 0.75
SMPD3-201ENST00000219334 RAG1P15918 1043 aa19.76■□□□□ 0.75
SMPD3-201ENST00000219334 ZNF280DQ6N043 979 aa19.76■□□□□ 0.75
SMPD3-201ENST00000219334 ARL8AQ96BM9 186 aa19.76■□□□□ 0.75
SMPD3-201ENST00000219334 FOXP3Q9BZS1 431 aa19.76■□□□□ 0.75
SMPD3-201ENST00000219334 AGPAT5Q9NUQ2 364 aa19.76■□□□□ 0.75
SMPD3-201ENST00000219334 F9P00740 461 aa19.76■□□□□ 0.75
SMPD3-201ENST00000219334 VTNP04004 478 aa19.76■□□□□ 0.75
SMPD3-201ENST00000219334 COMTP21964 271 aa19.76■□□□□ 0.75
SMPD3-201ENST00000219334 AP2B1P63010 937 aa19.76■□□□□ 0.75
SMPD3-201ENST00000219334 C1orf131Q8NDD1 294 aaKnown RBP19.76■□□□□ 0.75
SMPD3-201ENST00000219334 GMCL1Q96IK5 515 aa19.76■□□□□ 0.75
SMPD3-201ENST00000219334 PXDNLA1KZ92 1463 aa19.76■□□□□ 0.75
SMPD3-201ENST00000219334 RHOBTB1O94844 696 aa19.76■□□□□ 0.75
SMPD3-201ENST00000219334 HLA-DPA1P20036 260 aa19.76■□□□□ 0.75
SMPD3-201ENST00000219334 AVPR1AP37288 418 aa19.76■□□□□ 0.75
SMPD3-201ENST00000219334 PDIA6Q15084 440 aa19.76■□□□□ 0.75
SMPD3-201ENST00000219334 EPC2Q52LR7 807 aa19.76■□□□□ 0.75
SMPD3-201ENST00000219334 DEFB128Q7Z7B8 93 aa19.76■□□□□ 0.75
SMPD3-201ENST00000219334 CHST12Q9NRB3 414 aa19.76■□□□□ 0.75
SMPD3-201ENST00000219334 TMEM161AQ9NX61 479 aa19.76■□□□□ 0.75
SMPD3-201ENST00000219334 PDHXO00330 501 aa19.76■□□□□ 0.75
SMPD3-201ENST00000219334 MTF1Q14872 753 aa19.76■□□□□ 0.75
SMPD3-201ENST00000219334 SEZ6Q53EL9 994 aa19.76■□□□□ 0.75
SMPD3-201ENST00000219334 TXNRD3Q86VQ6 643 aa19.76■□□□□ 0.75
SMPD3-201ENST00000219334 STX19Q8N4C7 294 aa19.76■□□□□ 0.75
SMPD3-201ENST00000219334 NOP53Q9NZM5 478 aaKnown RBP19.76■□□□□ 0.75
SMPD3-201ENST00000219334 CDC42BPBQ9Y5S2 1711 aa19.76■□□□□ 0.75
SMPD3-201ENST00000219334 NEXMIFQ5QGS0 1516 aa19.76■□□□□ 0.75
SMPD3-201ENST00000219334 CXCL11O14625 94 aa19.75■□□□□ 0.75
SMPD3-201ENST00000219334 CDH16O75309 829 aa19.75■□□□□ 0.75
SMPD3-201ENST00000219334 KLHDC7AQ5VTJ3 777 aa19.75■□□□□ 0.75
SMPD3-201ENST00000219334 DPF2Q92785 391 aa19.75■□□□□ 0.75
SMPD3-201ENST00000219334 PPCSQ9HAB8 311 aa19.75■□□□□ 0.75
SMPD3-201ENST00000219334 MYL2P10916 166 aa19.75■□□□□ 0.75
SMPD3-201ENST00000219334 TROAPQ12815 778 aa19.75■□□□□ 0.75
SMPD3-201ENST00000219334 STX3Q13277 289 aa19.75■□□□□ 0.75
SMPD3-201ENST00000219334 USP49Q70CQ1 688 aa19.75■□□□□ 0.75
SMPD3-201ENST00000219334 RNF168Q8IYW5 571 aaPredicted RBP19.75■□□□□ 0.75
SMPD3-201ENST00000219334 SPATC1LQ9H0A9 340 aa19.75■□□□□ 0.75
SMPD3-201ENST00000219334 GOLPH3Q9H4A6 298 aa19.75■□□□□ 0.75
SMPD3-201ENST00000219334 CHMP2BQ9UQN3 213 aa19.75■□□□□ 0.75
SMPD3-201ENST00000219334 SERPINB4P48594 390 aa19.75■□□□□ 0.75
SMPD3-201ENST00000219334 OCA2Q04671 838 aa19.75■□□□□ 0.75
SMPD3-201ENST00000219334 GMCL1P1Q8NEA9 526 aa19.75■□□□□ 0.75
SMPD3-201ENST00000219334 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.75■□□□□ 0.75
SMPD3-201ENST00000219334 PPP1R36Q96LQ0 422 aa19.75■□□□□ 0.75
SMPD3-201ENST00000219334 PSMC3IPQ9P2W1 217 aaPredicted RBP19.75■□□□□ 0.75
SMPD3-201ENST00000219334 ALDH2P05091 517 aa19.75■□□□□ 0.75
SMPD3-201ENST00000219334 VDRP11473 427 aa19.75■□□□□ 0.75
SMPD3-201ENST00000219334 C2orf81A6NN90 581 aa19.75■□□□□ 0.75
SMPD3-201ENST00000219334 GARTP22102 1010 aa19.75■□□□□ 0.75
SMPD3-201ENST00000219334 FAM83AQ86UY5 434 aa19.75■□□□□ 0.75
SMPD3-201ENST00000219334 ADGRF2Q8IZF7 708 aa19.75■□□□□ 0.75
SMPD3-201ENST00000219334 C9orf72Q96LT7 481 aa19.75■□□□□ 0.75
SMPD3-201ENST00000219334 RUSC1Q9BVN2 902 aa19.75■□□□□ 0.75
SMPD3-201ENST00000219334 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.75■□□□□ 0.75
SMPD3-201ENST00000219334 C6orf203Q9P0P8 240 aaPredicted RBP19.75■□□□□ 0.75
SMPD3-201ENST00000219334 QRICH2Q9H0J4 1663 aa19.75■□□□□ 0.75
SMPD3-201ENST00000219334 CLASP2O75122 1294 aaKnown RBP19.74■□□□□ 0.75
SMPD3-201ENST00000219334 HPCAP84074 193 aa19.74■□□□□ 0.75
SMPD3-201ENST00000219334 MAP3K10Q02779 954 aa19.74■□□□□ 0.75
SMPD3-201ENST00000219334 UGT3A1Q6NUS8 523 aa19.74■□□□□ 0.75
SMPD3-201ENST00000219334 ACOT1Q86TX2 421 aa19.74■□□□□ 0.75
SMPD3-201ENST00000219334 TFB1MQ8WVM0 346 aaKnown RBP19.74■□□□□ 0.75
SMPD3-201ENST00000219334 SREBF1P36956 1147 aa19.74■□□□□ 0.75
SMPD3-201ENST00000219334 CCDC157Q569K6 752 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms