RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 PPFIBP1Q86W92 1011 aa29.07■■■□□ 2.24
CHMP4B-201ENST00000217402 TTC39CQ8N584 583 aa29.07■■■□□ 2.24
CHMP4B-201ENST00000217402 RBBP8NLQ8NC74 664 aaPredicted RBP29.07■■■□□ 2.24
CHMP4B-201ENST00000217402 MICAL1Q8TDZ2 1067 aa29.07■■■□□ 2.24
CHMP4B-201ENST00000217402 WHAMMQ8TF30 809 aa29.07■■■□□ 2.24
CHMP4B-201ENST00000217402 BAP1Q92560 729 aa29.07■■■□□ 2.24
CHMP4B-201ENST00000217402 LRCH3Q96II8 777 aa29.07■■■□□ 2.24
CHMP4B-201ENST00000217402 ELOVL4Q9GZR5 314 aa29.07■■■□□ 2.24
CHMP4B-201ENST00000217402 CASP14P31944 242 aa29.06■■■□□ 2.24
CHMP4B-201ENST00000217402 FXR1P51114 621 aaKnown RBP eCLIP29.06■■■□□ 2.24
CHMP4B-201ENST00000217402 CAMK1Q14012 370 aa29.06■■■□□ 2.24
CHMP4B-201ENST00000217402 TRIM14Q14142 442 aa29.06■■■□□ 2.24
CHMP4B-201ENST00000217402 SPC24Q8NBT2 197 aa29.06■■■□□ 2.24
CHMP4B-201ENST00000217402 IQCDQ96DY2 449 aa29.06■■■□□ 2.24
CHMP4B-201ENST00000217402 TMEM209Q96SK2 561 aa29.06■■■□□ 2.24
CHMP4B-201ENST00000217402 NT5C1AQ9BXI3 368 aa29.06■■■□□ 2.24
CHMP4B-201ENST00000217402 FAM124BQ9H5Z6 455 aaPredicted RBP29.06■■■□□ 2.24
CHMP4B-201ENST00000217402 COL4A4P53420 1690 aaPredicted RBP29.06■■■□□ 2.24
CHMP4B-201ENST00000217402 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP29.05■■■□□ 2.24
CHMP4B-201ENST00000217402 A0A1W2PQJ5 194 aa29.05■■■□□ 2.24
CHMP4B-201ENST00000217402 CXCL14O95715 111 aa29.05■■■□□ 2.24
CHMP4B-201ENST00000217402 PCSK1P29120 753 aa29.05■■■□□ 2.24
CHMP4B-201ENST00000217402 IRS1P35568 1242 aa29.05■■■□□ 2.24
CHMP4B-201ENST00000217402 CDR1P51861 262 aa29.05■■■□□ 2.24
CHMP4B-201ENST00000217402 PDXDC1Q6P996 788 aa29.05■■■□□ 2.24
CHMP4B-201ENST00000217402 RSPO2Q6UXX9 243 aaPredicted RBP29.05■■■□□ 2.24
CHMP4B-201ENST00000217402 ACOT1Q86TX2 421 aa29.05■■■□□ 2.24
CHMP4B-201ENST00000217402 UNC93AQ86WB7 457 aa29.05■■■□□ 2.24
CHMP4B-201ENST00000217402 GLYCTKQ8IVS8 523 aa29.05■■■□□ 2.24
CHMP4B-201ENST00000217402 SYT15Q9BQS2 421 aa29.05■■■□□ 2.24
CHMP4B-201ENST00000217402 MTRRQ9UBK8 725 aa29.05■■■□□ 2.24
CHMP4B-201ENST00000217402 LRRC53A6NM62 1247 aa29.05■■■□□ 2.24
CHMP4B-201ENST00000217402 ATP2C2O75185 946 aa29.05■■■□□ 2.24
CHMP4B-201ENST00000217402 OR4Q2P0C623 313 aa29.05■■■□□ 2.24
CHMP4B-201ENST00000217402 RAD23BP54727 409 aa29.05■■■□□ 2.24
CHMP4B-201ENST00000217402 ARPP19P56211 112 aa29.05■■■□□ 2.24
CHMP4B-201ENST00000217402 SMC1AQ14683 1233 aaKnown RBP29.05■■■□□ 2.24
CHMP4B-201ENST00000217402 CCDC142Q17RM4 750 aa29.05■■■□□ 2.24
CHMP4B-201ENST00000217402 LPIN3Q9BQK8 851 aa29.05■■■□□ 2.24
CHMP4B-201ENST00000217402 EDEM3Q9BZQ6 932 aa29.05■■■□□ 2.24
CHMP4B-201ENST00000217402 TTYH1Q9H313 450 aaPredicted RBP29.05■■■□□ 2.24
CHMP4B-201ENST00000217402 CAPN11Q9UMQ6 739 aa29.05■■■□□ 2.24
CHMP4B-201ENST00000217402 CDY1Q9Y6F8 540 aa29.05■■■□□ 2.24
CHMP4B-201ENST00000217402 CDH23Q9H251 3354 aa29.04■■■□□ 2.24
CHMP4B-201ENST00000217402 CALCAP01258 141 aa29.04■■■□□ 2.24
CHMP4B-201ENST00000217402 TPM1P09493 284 aa29.04■■■□□ 2.24
CHMP4B-201ENST00000217402 GOLGA8FQ08AF8 430 aa29.04■■■□□ 2.24
CHMP4B-201ENST00000217402 GOLGA8DPQ0D2H9 430 aa29.04■■■□□ 2.24
CHMP4B-201ENST00000217402 BMS1Q14692 1282 aaKnown RBP29.04■■■□□ 2.24
CHMP4B-201ENST00000217402 ARHGAP30Q7Z6I6 1101 aaPredicted RBP29.04■■■□□ 2.24
CHMP4B-201ENST00000217402 FAM71AQ8IYT1 594 aa29.04■■■□□ 2.24
CHMP4B-201ENST00000217402 ACBD6Q9BR61 282 aa29.04■■■□□ 2.24
CHMP4B-201ENST00000217402 CNTN6Q9UQ52 1028 aa29.04■■■□□ 2.24
CHMP4B-201ENST00000217402 LUC7L2Q9Y383 392 aaKnown RBP29.04■■■□□ 2.24
CHMP4B-201ENST00000217402 CYP26A1O43174 497 aa29.03■■■□□ 2.24
CHMP4B-201ENST00000217402 ADAM12O43184 909 aa29.03■■■□□ 2.24
CHMP4B-201ENST00000217402 GFPT2O94808 682 aa29.03■■■□□ 2.24
CHMP4B-201ENST00000217402 SOX5P35711 763 aa29.03■■■□□ 2.24
CHMP4B-201ENST00000217402 STAT1P42224 750 aa29.03■■■□□ 2.24
CHMP4B-201ENST00000217402 TSPY1Q01534 308 aa29.03■■■□□ 2.24
CHMP4B-201ENST00000217402 TBX2Q13207 712 aaPredicted RBP29.03■■■□□ 2.24
CHMP4B-201ENST00000217402 SLC4A11Q8NBS3 891 aa29.03■■■□□ 2.24
CHMP4B-201ENST00000217402 ZNF397Q8NF99 534 aaPredicted RBP29.03■■■□□ 2.24
CHMP4B-201ENST00000217402 TMEM176AQ96HP8 235 aa29.03■■■□□ 2.24
CHMP4B-201ENST00000217402 TNIP3Q96KP6 325 aa29.03■■■□□ 2.24
CHMP4B-201ENST00000217402 ACP6Q9NPH0 428 aa29.03■■■□□ 2.24
CHMP4B-201ENST00000217402 CDH9Q9ULB4 789 aa29.03■■■□□ 2.24
CHMP4B-201ENST00000217402 SSX2IPQ9Y2D8 614 aa29.03■■■□□ 2.24
CHMP4B-201ENST00000217402 BACE2Q9Y5Z0 518 aa29.03■■■□□ 2.24
CHMP4B-201ENST00000217402 OR6C75A6NL08 312 aa29.02■■■□□ 2.24
CHMP4B-201ENST00000217402 HIDE1A8MVS5 230 aa29.02■■■□□ 2.24
CHMP4B-201ENST00000217402 FSCN2O14926 492 aa29.02■■■□□ 2.24
CHMP4B-201ENST00000217402 TBC1D4O60343 1298 aa29.02■■■□□ 2.24
CHMP4B-201ENST00000217402 LILRB3O75022 631 aa29.02■■■□□ 2.24
CHMP4B-201ENST00000217402 ZNF132P52740 706 aa29.02■■■□□ 2.24
CHMP4B-201ENST00000217402 ARID5AQ03989 594 aa29.02■■■□□ 2.24
CHMP4B-201ENST00000217402 INTS6LQ5JSJ4 861 aaKnown RBP29.02■■■□□ 2.24
CHMP4B-201ENST00000217402 B3GALNT2Q8NCR0 500 aa29.02■■■□□ 2.24
CHMP4B-201ENST00000217402 ANP32BQ92688 251 aaKnown RBP29.02■■■□□ 2.24
CHMP4B-201ENST00000217402 NGRNQ9NPE2 291 aaKnown RBP29.02■■■□□ 2.24
CHMP4B-201ENST00000217402 TMEM265A0A087WTH1 108 aa29.02■■■□□ 2.24
CHMP4B-201ENST00000217402 LPXNO60711 386 aa29.02■■■□□ 2.24
CHMP4B-201ENST00000217402 CPB1P15086 417 aa29.02■■■□□ 2.24
CHMP4B-201ENST00000217402 ZBED6P86452 979 aa29.02■■■□□ 2.24
CHMP4B-201ENST00000217402 HEXIM2Q96MH2 286 aaKnown RBP29.02■■■□□ 2.24
CHMP4B-201ENST00000217402 CLSTN3Q9BQT9 956 aa29.02■■■□□ 2.24
CHMP4B-201ENST00000217402 LMAN2LQ9H0V9 348 aa29.02■■■□□ 2.24
CHMP4B-201ENST00000217402 PRDM12Q9H4Q4 367 aa29.02■■■□□ 2.24
CHMP4B-201ENST00000217402 CRTAC1Q9NQ79 661 aa29.02■■■□□ 2.24
CHMP4B-201ENST00000217402 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP29.02■■■□□ 2.241e-9■■■□□ 15.5
CHMP4B-201ENST00000217402 C2orf71A6NGG8 1288 aa29.01■■■□□ 2.23
CHMP4B-201ENST00000217402 CD19P15391 556 aa29.01■■■□□ 2.23
CHMP4B-201ENST00000217402 PTPN1P18031 435 aaKnown RBP29.01■■■□□ 2.23
CHMP4B-201ENST00000217402 OR1D2P34982 312 aa29.01■■■□□ 2.23
CHMP4B-201ENST00000217402 KRT9P35527 623 aa29.01■■■□□ 2.23
CHMP4B-201ENST00000217402 MDH1BQ5I0G3 518 aa29.01■■■□□ 2.23
CHMP4B-201ENST00000217402 ZNF697Q5TEC3 545 aa29.01■■■□□ 2.23
CHMP4B-201ENST00000217402 GPR65Q8IYL9 337 aa29.01■■■□□ 2.23
CHMP4B-201ENST00000217402 MRPL43Q8N983 215 aaKnown RBP29.01■■■□□ 2.23
CHMP4B-201ENST00000217402 C12orf29Q8N999 325 aa29.01■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms