RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 TMEM35BQ8NCS4 154 aa14.03□□□□□ -0.16
SRP54-201ENST00000216774 OR5B17Q8NGF7 314 aa14.03□□□□□ -0.16
SRP54-201ENST00000216774 NSMCE1Q8WV22 266 aa14.03□□□□□ -0.16
SRP54-201ENST00000216774 TMEM143Q96AN5 459 aa14.03□□□□□ -0.16
SRP54-201ENST00000216774 ZBTB45Q96K62 511 aaPredicted RBP14.03□□□□□ -0.16
SRP54-201ENST00000216774 MCEEQ96PE7 176 aa14.03□□□□□ -0.16
SRP54-201ENST00000216774 TMEM134Q9H6X4 195 aa14.03□□□□□ -0.16
SRP54-201ENST00000216774 VPS37BQ9H9H4 285 aa14.03□□□□□ -0.16
SRP54-201ENST00000216774 ETNK1Q9HBU6 452 aa14.03□□□□□ -0.16
SRP54-201ENST00000216774 ANKFY1Q9P2R3 1169 aa14.03□□□□□ -0.16
SRP54-201ENST00000216774 FBXO40Q9UH90 709 aa14.03□□□□□ -0.16
SRP54-201ENST00000216774 MAFBQ9Y5Q3 323 aaPredicted RBP14.03□□□□□ -0.16
SRP54-201ENST00000216774 EDF1O60869 148 aaKnown RBP14.03□□□□□ -0.16
SRP54-201ENST00000216774 ASS1P00966 412 aaKnown RBP14.03□□□□□ -0.16
SRP54-201ENST00000216774 OATP04181 439 aa14.03□□□□□ -0.16
SRP54-201ENST00000216774 CDKN2BP42772 138 aa14.03□□□□□ -0.16
SRP54-201ENST00000216774 PDE4CQ08493 712 aa14.03□□□□□ -0.16
SRP54-201ENST00000216774 DNAJC3Q13217 504 aa14.03□□□□□ -0.16
SRP54-201ENST00000216774 GRM1Q13255 1194 aa14.03□□□□□ -0.16
SRP54-201ENST00000216774 CRYMQ14894 314 aa14.03□□□□□ -0.16
SRP54-201ENST00000216774 FASTKD3Q14CZ7 662 aaKnown RBP14.03□□□□□ -0.16
SRP54-201ENST00000216774 WDR72Q3MJ13 1102 aa14.03□□□□□ -0.16
SRP54-201ENST00000216774 ZC3H12AQ5D1E8 599 aaKnown RBP14.03□□□□□ -0.16
SRP54-201ENST00000216774 PPP1R15BQ5SWA1 713 aa14.03□□□□□ -0.16
SRP54-201ENST00000216774 DCUN1D2Q6PH85 259 aa14.03□□□□□ -0.16
SRP54-201ENST00000216774 POLNQ7Z5Q5 900 aa14.03□□□□□ -0.16
SRP54-201ENST00000216774 ZBED8Q8IZ13 594 aa14.03□□□□□ -0.16
SRP54-201ENST00000216774 SLC7A3Q8WY07 619 aa14.03□□□□□ -0.16
SRP54-201ENST00000216774 PRCCQ92733 491 aaPredicted RBP14.03□□□□□ -0.16
SRP54-201ENST00000216774 LRRC37BQ96QE4 947 aa14.03□□□□□ -0.16
SRP54-201ENST00000216774 TARS2Q9BW92 718 aaKnown RBP14.03□□□□□ -0.16
SRP54-201ENST00000216774 FRMD8P1Q9BZ68 369 aaPredicted RBP14.03□□□□□ -0.16
SRP54-201ENST00000216774 EFR3BQ9Y2G0 817 aa14.03□□□□□ -0.16
SRP54-201ENST00000216774 STK38LQ9Y2H1 464 aa14.03□□□□□ -0.16
SRP54-201ENST00000216774 GOLGB1Q14789 3259 aaKnown RBP14.03□□□□□ -0.16
SRP54-201ENST00000216774 F8VP50 259 aa14.02□□□□□ -0.16
SRP54-201ENST00000216774 TYROBPO43914 113 aa14.02□□□□□ -0.16
SRP54-201ENST00000216774 BACE1P56817 501 aa14.02□□□□□ -0.16
SRP54-201ENST00000216774 TGFB2P61812 414 aa14.02□□□□□ -0.16
SRP54-201ENST00000216774 CXCL9Q07325 125 aa14.02□□□□□ -0.16
SRP54-201ENST00000216774 EFHC2Q5JST6 749 aa14.02□□□□□ -0.16
SRP54-201ENST00000216774 WDR49Q8IV35 697 aa14.02□□□□□ -0.16
SRP54-201ENST00000216774 MAB21L3Q8N8X9 362 aa14.02□□□□□ -0.16
SRP54-201ENST00000216774 SLC35B2Q8TB61 432 aa14.02□□□□□ -0.16
SRP54-201ENST00000216774 LRRC8CQ8TDW0 803 aa14.02□□□□□ -0.16
SRP54-201ENST00000216774 MYLK2Q9H1R3 596 aa14.02□□□□□ -0.16
SRP54-201ENST00000216774 CYP39A1Q9NYL5 469 aa14.02□□□□□ -0.16
SRP54-201ENST00000216774 ADAMTS5Q9UNA0 930 aa14.02□□□□□ -0.16
SRP54-201ENST00000216774 TRIM33Q9UPN9 1127 aa14.02□□□□□ -0.16
SRP54-201ENST00000216774 KIF1CO43896 1103 aaKnown RBP14.02□□□□□ -0.17
SRP54-201ENST00000216774 ATG7O95352 703 aa14.02□□□□□ -0.17
SRP54-201ENST00000216774 ETS1P14921 441 aa14.02□□□□□ -0.17
SRP54-201ENST00000216774 CA4P22748 312 aa14.02□□□□□ -0.17
SRP54-201ENST00000216774 EIF4BP23588 611 aaKnown RBP14.02□□□□□ -0.17
SRP54-201ENST00000216774 CDH5P33151 784 aaPredicted RBP14.02□□□□□ -0.17
SRP54-201ENST00000216774 RPA3P35244 121 aaPredicted RBP14.02□□□□□ -0.17
SRP54-201ENST00000216774 CLNS1AP54105 237 aaKnown RBP14.02□□□□□ -0.17
SRP54-201ENST00000216774 GEMIN4P57678 1058 aaKnown RBP14.02□□□□□ -0.17
SRP54-201ENST00000216774 HIF1AQ16665 826 aa14.02□□□□□ -0.17
SRP54-201ENST00000216774 VSIG1Q86XK7 387 aa14.02□□□□□ -0.17
SRP54-201ENST00000216774 AGGF1Q8N302 714 aaeCLIP14.02□□□□□ -0.17
SRP54-201ENST00000216774 INPP5DQ92835 1189 aa14.02□□□□□ -0.17
SRP54-201ENST00000216774 TMEM237Q96Q45 408 aa14.02□□□□□ -0.17
SRP54-201ENST00000216774 NIFKQ9BYG3 293 aaKnown RBP14.02□□□□□ -0.17
SRP54-201ENST00000216774 ZNF302Q9NR11 478 aa14.02□□□□□ -0.17
SRP54-201ENST00000216774 ZNF214Q9UL59 606 aaPredicted RBP14.02□□□□□ -0.17
SRP54-201ENST00000216774 FARP1Q9Y4F1 1045 aaPredicted RBP14.02□□□□□ -0.17
SRP54-201ENST00000216774 LRRD1A4D1F6 860 aa14.01□□□□□ -0.17
SRP54-201ENST00000216774 SGK1O00141 431 aa14.01□□□□□ -0.17
SRP54-201ENST00000216774 ZWINTO95229 277 aa14.01□□□□□ -0.17
SRP54-201ENST00000216774 ATP4AP20648 1035 aa14.01□□□□□ -0.17
SRP54-201ENST00000216774 PHBP35232 272 aa14.01□□□□□ -0.17
SRP54-201ENST00000216774 RFC5P40937 340 aa14.01□□□□□ -0.17
SRP54-201ENST00000216774 CCNG1P51959 295 aa14.01□□□□□ -0.17
SRP54-201ENST00000216774 OGDHQ02218 1023 aa14.01□□□□□ -0.17
SRP54-201ENST00000216774 PDIA2Q13087 525 aaKnown RBP14.01□□□□□ -0.17
SRP54-201ENST00000216774 ZPBP2Q6X784 338 aa14.01□□□□□ -0.17
SRP54-201ENST00000216774 BRSK2Q8IWQ3 736 aa14.01□□□□□ -0.17
SRP54-201ENST00000216774 ERP27Q96DN0 273 aa14.01□□□□□ -0.17
SRP54-201ENST00000216774 TMEM121Q9BTD3 319 aa14.01□□□□□ -0.17
SRP54-201ENST00000216774 KIF9Q9HAQ2 790 aa14.01□□□□□ -0.17
SRP54-201ENST00000216774 BATF3Q9NR55 127 aa14.01□□□□□ -0.17
SRP54-201ENST00000216774 GRID1Q9ULK0 1009 aa14.01□□□□□ -0.17
SRP54-201ENST00000216774 PCDHGC3Q9UN70 934 aa14.01□□□□□ -0.17
SRP54-201ENST00000216774 SCAF8Q9UPN6 1271 aaKnown RBP14.01□□□□□ -0.17
SRP54-201ENST00000216774 CHKBQ9Y259 395 aa14.01□□□□□ -0.17
SRP54-201ENST00000216774 A8MUI8 341 aa14.01□□□□□ -0.17
SRP54-201ENST00000216774 RPSAP08865 295 aaKnown RBP14.01□□□□□ -0.17
SRP54-201ENST00000216774 PLCB3Q01970 1234 aa14.01□□□□□ -0.17
SRP54-201ENST00000216774 HHATQ5VTY9 493 aa14.01□□□□□ -0.17
SRP54-201ENST00000216774 PPIL6Q8IXY8 311 aa14.01□□□□□ -0.17
SRP54-201ENST00000216774 C4orf33Q8N1A6 199 aa14.01□□□□□ -0.17
SRP54-201ENST00000216774 TTC13Q8NBP0 860 aa14.01□□□□□ -0.17
SRP54-201ENST00000216774 SPOCK2Q92563 424 aa14.01□□□□□ -0.17
SRP54-201ENST00000216774 ANKRD27Q96NW4 1050 aa14.01□□□□□ -0.17
SRP54-201ENST00000216774 NIF3L1Q9GZT8 377 aa14.01□□□□□ -0.17
SRP54-201ENST00000216774 ACAD9Q9H845 621 aa14.01□□□□□ -0.17
SRP54-201ENST00000216774 STRIP2Q9ULQ0 834 aa14.01□□□□□ -0.17
SRP54-201ENST00000216774 DOCK5Q9H7D0 1870 aa14□□□□□ -0.17
SRP54-201ENST00000216774 C3orf70A6NLC5 250 aaPredicted RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms