RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 BRSK2Q8IWQ3 736 aa16.17■□□□□ 0.18
UPK3A-201ENST00000216211 SYCP3Q8IZU3 236 aa16.17■□□□□ 0.18
UPK3A-201ENST00000216211 PDILTQ8N807 584 aa16.17■□□□□ 0.18
UPK3A-201ENST00000216211 CSGALNACT1Q8TDX6 532 aa16.17■□□□□ 0.18
UPK3A-201ENST00000216211 NOC3LQ8WTT2 800 aaKnown RBP16.17■□□□□ 0.18
UPK3A-201ENST00000216211 ATRIPQ8WXE1 791 aa16.17■□□□□ 0.18
UPK3A-201ENST00000216211 RUBCNQ92622 972 aa16.17■□□□□ 0.18
UPK3A-201ENST00000216211 INTS4Q96HW7 963 aaKnown RBP16.17■□□□□ 0.18
UPK3A-201ENST00000216211 FAM84AQ96KN4 292 aa16.17■□□□□ 0.18
UPK3A-201ENST00000216211 LRRC3BQ96PB8 259 aa16.17■□□□□ 0.18
UPK3A-201ENST00000216211 CHRDQ9H2X0 955 aa16.17■□□□□ 0.18
UPK3A-201ENST00000216211 PCIF1Q9H4Z3 704 aa16.17■□□□□ 0.18
UPK3A-201ENST00000216211 PANK4Q9NVE7 773 aa16.17■□□□□ 0.18
UPK3A-201ENST00000216211 ZSCAN32Q9NX65 697 aa16.17■□□□□ 0.18
UPK3A-201ENST00000216211 ABI2Q9NYB9 513 aaPredicted RBP16.17■□□□□ 0.18
UPK3A-201ENST00000216211 RBAKQ9NYW8 714 aaPredicted RBP16.17■□□□□ 0.18
UPK3A-201ENST00000216211 AGAP1Q9UPQ3 857 aa16.17■□□□□ 0.18
UPK3A-201ENST00000216211 PCDHB13Q9Y5F0 798 aa16.17■□□□□ 0.18
UPK3A-201ENST00000216211 PCDHGA2Q9Y5H1 932 aa16.17■□□□□ 0.18
UPK3A-201ENST00000216211 FRMD3A2A2Y4 597 aa16.16■□□□□ 0.18
UPK3A-201ENST00000216211 SLC38A8A6NNN8 435 aa16.16■□□□□ 0.18
UPK3A-201ENST00000216211 CHADO15335 359 aa16.16■□□□□ 0.18
UPK3A-201ENST00000216211 STX6O43752 255 aa16.16■□□□□ 0.18
UPK3A-201ENST00000216211 LDHAP00338 332 aaKnown RBP16.16■□□□□ 0.18
UPK3A-201ENST00000216211 ITGB3P05106 788 aa16.16■□□□□ 0.18
UPK3A-201ENST00000216211 HAPLN1P10915 354 aaPredicted RBP16.16■□□□□ 0.18
UPK3A-201ENST00000216211 GARTP22102 1010 aa16.16■□□□□ 0.18
UPK3A-201ENST00000216211 POLR2BP30876 1174 aaKnown RBP16.16■□□□□ 0.18
UPK3A-201ENST00000216211 SOX9P48436 509 aa16.16■□□□□ 0.18
UPK3A-201ENST00000216211 TAF12Q16514 161 aa16.16■□□□□ 0.18
UPK3A-201ENST00000216211 SCARA3Q6AZY7 606 aa16.16■□□□□ 0.18
UPK3A-201ENST00000216211 DCP1BQ8IZD4 617 aaKnown RBP16.16■□□□□ 0.18
UPK3A-201ENST00000216211 C1orf127Q8N9H9 656 aa16.16■□□□□ 0.18
UPK3A-201ENST00000216211 ZBTB44Q8NCP5 570 aa16.16■□□□□ 0.18
UPK3A-201ENST00000216211 TTC8Q8TAM2 541 aa16.16■□□□□ 0.18
UPK3A-201ENST00000216211 SPPL2BQ8TCT7 592 aa16.16■□□□□ 0.18
UPK3A-201ENST00000216211 C2orf15Q8WU43 125 aaKnown RBP16.16■□□□□ 0.18
UPK3A-201ENST00000216211 NELL1Q92832 810 aa16.16■□□□□ 0.18
UPK3A-201ENST00000216211 ZFYVE19Q96K21 471 aa16.16■□□□□ 0.18
UPK3A-201ENST00000216211 CBWD1Q9BRT8 395 aa16.16■□□□□ 0.18
UPK3A-201ENST00000216211 ZSCAN16Q9H4T2 348 aaPredicted RBP16.16■□□□□ 0.18
UPK3A-201ENST00000216211 IL21Q9HBE4 155 aa16.16■□□□□ 0.18
UPK3A-201ENST00000216211 TMLHEQ9NVH6 421 aa16.16■□□□□ 0.18
UPK3A-201ENST00000216211 MORC2Q9Y6X9 1032 aaPredicted RBP16.16■□□□□ 0.18
UPK3A-201ENST00000216211 GREB1Q4ZG55 1949 aa16.15■□□□□ 0.18
UPK3A-201ENST00000216211 LILRB5O75023 590 aa16.15■□□□□ 0.18
UPK3A-201ENST00000216211 PRPF6O94906 941 aaKnown RBP16.15■□□□□ 0.18
UPK3A-201ENST00000216211 PRAMEF12O95522 483 aa16.15■□□□□ 0.18
UPK3A-201ENST00000216211 CHRNB1P11230 501 aa16.15■□□□□ 0.18
UPK3A-201ENST00000216211 CDC25CP30307 473 aa16.15■□□□□ 0.18
UPK3A-201ENST00000216211 PNPLA4P41247 253 aa16.15■□□□□ 0.18
UPK3A-201ENST00000216211 KPNA1P52294 538 aaPredicted RBP16.15■□□□□ 0.18
UPK3A-201ENST00000216211 SMARCB1Q12824 385 aa16.15■□□□□ 0.18
UPK3A-201ENST00000216211 ALCAMQ13740 583 aa16.15■□□□□ 0.18
UPK3A-201ENST00000216211 STK38Q15208 465 aa16.15■□□□□ 0.18
UPK3A-201ENST00000216211 STKLD1Q8NE28 680 aa16.15■□□□□ 0.18
UPK3A-201ENST00000216211 CACTINQ8WUQ7 758 aaKnown RBP16.15■□□□□ 0.18
UPK3A-201ENST00000216211 GCNAQ96QF7 691 aa16.15■□□□□ 0.18
UPK3A-201ENST00000216211 L1RE1Q9UN81 338 aa16.15■□□□□ 0.18
UPK3A-201ENST00000216211 ANAPC1Q9H1A4 1944 aa16.15■□□□□ 0.18
UPK3A-201ENST00000216211 EXTL3O43909 919 aa16.14■□□□□ 0.17
UPK3A-201ENST00000216211 NASPP49321 788 aaPredicted RBP16.14■□□□□ 0.17
UPK3A-201ENST00000216211 GPR15P49685 360 aa16.14■□□□□ 0.17
UPK3A-201ENST00000216211 MLLT6P55198 1093 aaPredicted RBP16.14■□□□□ 0.17
UPK3A-201ENST00000216211 BFSP1Q12934 665 aa16.14■□□□□ 0.17
UPK3A-201ENST00000216211 NFKBIBQ15653 356 aa16.14■□□□□ 0.17
UPK3A-201ENST00000216211 ARHGAP29Q52LW3 1261 aa16.14■□□□□ 0.17
UPK3A-201ENST00000216211 CCDC65Q8IXS2 484 aa16.14■□□□□ 0.17
UPK3A-201ENST00000216211 PDCL2Q8N4E4 241 aa16.14■□□□□ 0.17
UPK3A-201ENST00000216211 LINC00301Q8NCQ3 95 aa16.14■□□□□ 0.17
UPK3A-201ENST00000216211 CXorf38Q8TB03 319 aa16.14■□□□□ 0.17
UPK3A-201ENST00000216211 HPS3Q969F9 1004 aa16.14■□□□□ 0.17
UPK3A-201ENST00000216211 RMDN1Q96DB5 314 aa16.14■□□□□ 0.17
UPK3A-201ENST00000216211 PI4K2AQ9BTU6 479 aa16.14■□□□□ 0.17
UPK3A-201ENST00000216211 SMG9Q9H0W8 520 aaKnown RBP16.14■□□□□ 0.17
UPK3A-201ENST00000216211 TASP1Q9H6P5 420 aa16.14■□□□□ 0.17
UPK3A-201ENST00000216211 C8orf33Q9H7E9 229 aaPredicted RBP16.14■□□□□ 0.17
UPK3A-201ENST00000216211 PDE11AQ9HCR9 933 aa16.14■□□□□ 0.17
UPK3A-201ENST00000216211 RBM12Q9NTZ6 932 aaKnown RBP16.14■□□□□ 0.17
UPK3A-201ENST00000216211 OBP2AQ9NY56 170 aa16.14■□□□□ 0.17
UPK3A-201ENST00000216211 GTSE1Q9NYZ3 720 aa16.14■□□□□ 0.17
UPK3A-201ENST00000216211 NCDNQ9UBB6 729 aa16.14■□□□□ 0.17
UPK3A-201ENST00000216211 PCDHB5Q9Y5E4 795 aa16.14■□□□□ 0.17
UPK3A-201ENST00000216211 PTPRDP23468 1912 aa16.13■□□□□ 0.17
UPK3A-201ENST00000216211 HUS1O60921 280 aa16.13■□□□□ 0.17
UPK3A-201ENST00000216211 PRPF40AO75400 957 aaKnown RBP16.13■□□□□ 0.17
UPK3A-201ENST00000216211 KRT19P08727 400 aa16.13■□□□□ 0.17
UPK3A-201ENST00000216211 TDGF1P13385 188 aa16.13■□□□□ 0.17
UPK3A-201ENST00000216211 ACAT1P24752 427 aaKnown RBP16.13■□□□□ 0.17
UPK3A-201ENST00000216211 WEE1P30291 646 aa16.13■□□□□ 0.17
UPK3A-201ENST00000216211 FOXK2Q01167 660 aa16.13■□□□□ 0.17
UPK3A-201ENST00000216211 TSPY1Q01534 308 aa16.13■□□□□ 0.17
UPK3A-201ENST00000216211 GAS6Q14393 721 aa16.13■□□□□ 0.17
UPK3A-201ENST00000216211 SDHAF4Q5VUM1 108 aa16.13■□□□□ 0.17
UPK3A-201ENST00000216211 LMBRD2Q68DH5 695 aaPredicted RBP16.13■□□□□ 0.17
UPK3A-201ENST00000216211 TXNDC11Q6PKC3 985 aa16.13■□□□□ 0.17
UPK3A-201ENST00000216211 GPD1LQ8N335 351 aa16.13■□□□□ 0.17
UPK3A-201ENST00000216211 CSGALNACT2Q8N6G5 542 aa16.13■□□□□ 0.17
UPK3A-201ENST00000216211 GLIS3Q8NEA6 775 aa16.13■□□□□ 0.17
UPK3A-201ENST00000216211 BPIFB1Q8TDL5 484 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms