RNA–Protein interactions for RNA: ENST00000215587.11

POLR2E-201, Transcript of RNA polymerase II subunit E, humanhuman

TSL 3

Gene POLR2E, Length 1,286 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-201ENST00000215587 EIF3CQ99613 913 aaKnown RBP17.66■□□□□ 0.42
POLR2E-201ENST00000215587 ELOVL4Q9GZR5 314 aa17.66■□□□□ 0.42
POLR2E-201ENST00000215587 PDCL3Q9H2J4 239 aa17.66■□□□□ 0.42
POLR2E-201ENST00000215587 CWH43Q9H720 699 aa17.66■□□□□ 0.42
POLR2E-201ENST00000215587 LUC7LQ9NQ29 371 aaKnown RBP17.66■□□□□ 0.42
POLR2E-201ENST00000215587 HMGXB4Q9UGU5 601 aa17.66■□□□□ 0.42
POLR2E-201ENST00000215587 INSL6Q9Y581 213 aa17.66■□□□□ 0.42
POLR2E-201ENST00000215587 COL4A6Q14031 1691 aa17.66■□□□□ 0.42
POLR2E-201ENST00000215587 SF3B1O75533 1304 aaKnown RBP eCLIP17.66■□□□□ 0.423e-6■■■■■ 103.4
POLR2E-201ENST00000215587 I3L4J1 428 aa17.65■□□□□ 0.42
POLR2E-201ENST00000215587 MED7O43513 233 aa17.65■□□□□ 0.42
POLR2E-201ENST00000215587 KRT83P78385 493 aa17.65■□□□□ 0.42
POLR2E-201ENST00000215587 HTRA4P83105 476 aaPredicted RBP17.65■□□□□ 0.42
POLR2E-201ENST00000215587 ORC1Q13415 861 aa17.65■□□□□ 0.42
POLR2E-201ENST00000215587 SLC18A3Q16572 532 aa17.65■□□□□ 0.42
POLR2E-201ENST00000215587 ASTE1Q2TB18 679 aaPredicted RBP17.65■□□□□ 0.42
POLR2E-201ENST00000215587 TOGARAM2Q6ZUX3 1019 aa17.65■□□□□ 0.42
POLR2E-201ENST00000215587 GLYCTKQ8IVS8 523 aa17.65■□□□□ 0.42
POLR2E-201ENST00000215587 HERC6Q8IVU3 1022 aa17.65■□□□□ 0.42
POLR2E-201ENST00000215587 SLC4A11Q8NBS3 891 aa17.65■□□□□ 0.42
POLR2E-201ENST00000215587 HEXIM2Q96MH2 286 aaKnown RBP17.65■□□□□ 0.42
POLR2E-201ENST00000215587 TWNKQ96RR1 684 aa17.65■□□□□ 0.42
POLR2E-201ENST00000215587 SYT11Q9BT88 431 aa17.65■□□□□ 0.42
POLR2E-201ENST00000215587 ACP6Q9NPH0 428 aa17.65■□□□□ 0.42
POLR2E-201ENST00000215587 AAASQ9NRG9 546 aa17.65■□□□□ 0.42
POLR2E-201ENST00000215587 SPTLC3Q9NUV7 552 aa17.65■□□□□ 0.42
POLR2E-201ENST00000215587 ADAMTS1Q9UHI8 967 aa17.65■□□□□ 0.42
POLR2E-201ENST00000215587 KIAA1257Q9ULG3 409 aa17.65■□□□□ 0.42
POLR2E-201ENST00000215587 MRPL42Q9Y6G3 142 aaKnown RBP17.65■□□□□ 0.42
POLR2E-201ENST00000215587 GABRDO14764 452 aa17.64■□□□□ 0.41
POLR2E-201ENST00000215587 CALCAP01258 141 aa17.64■□□□□ 0.41
POLR2E-201ENST00000215587 MMEP08473 750 aa17.64■□□□□ 0.41
POLR2E-201ENST00000215587 PDGFRBP09619 1106 aa17.64■□□□□ 0.41
POLR2E-201ENST00000215587 CCDC175P0C221 793 aa17.64■□□□□ 0.41
POLR2E-201ENST00000215587 VDRP11473 427 aa17.64■□□□□ 0.41
POLR2E-201ENST00000215587 BRD2P25440 801 aaKnown RBP17.64■□□□□ 0.41
POLR2E-201ENST00000215587 PCSK1P29120 753 aa17.64■□□□□ 0.41
POLR2E-201ENST00000215587 STILQ15468 1287 aa17.64■□□□□ 0.41
POLR2E-201ENST00000215587 SGO2Q562F6 1265 aa17.64■□□□□ 0.41
POLR2E-201ENST00000215587 FUT10Q6P4F1 479 aa17.64■□□□□ 0.41
POLR2E-201ENST00000215587 KCNT2Q6UVM3 1135 aa17.64■□□□□ 0.41
POLR2E-201ENST00000215587 TRIM72Q6ZMU5 477 aa17.64■□□□□ 0.41
POLR2E-201ENST00000215587 ACOT1Q86TX2 421 aa17.64■□□□□ 0.41
POLR2E-201ENST00000215587 ZSCAN30Q86W11 494 aa17.64■□□□□ 0.41
POLR2E-201ENST00000215587 OSTM1Q86WC4 334 aa17.64■□□□□ 0.41
POLR2E-201ENST00000215587 THEM5Q8N1Q8 247 aa17.64■□□□□ 0.41
POLR2E-201ENST00000215587 FIBCD1Q8N539 461 aa17.64■□□□□ 0.41
POLR2E-201ENST00000215587 DDX1Q92499 740 aaKnown RBP17.64■□□□□ 0.41
POLR2E-201ENST00000215587 RAD9AQ99638 391 aa17.64■□□□□ 0.41
POLR2E-201ENST00000215587 DESI2Q9BSY9 194 aa17.64■□□□□ 0.41
POLR2E-201ENST00000215587 MARCH5Q9NX47 278 aa17.64■□□□□ 0.41
POLR2E-201ENST00000215587 TIMM13Q9Y5L4 95 aaPredicted RBP17.64■□□□□ 0.41
POLR2E-201ENST00000215587 PRUNE2Q8WUY3 3088 aa17.64■□□□□ 0.41
POLR2E-201ENST00000215587 A0A087X0T9 212 aa17.63■□□□□ 0.41
POLR2E-201ENST00000215587 NT5C1B-RDH14C9J2C7 533 aa17.63■□□□□ 0.41
POLR2E-201ENST00000215587 DDX3XO00571 662 aaKnown RBP eCLIP17.63■□□□□ 0.413e-45■■□□□ 12.6
POLR2E-201ENST00000215587 SYN3O14994 580 aa17.63■□□□□ 0.41
POLR2E-201ENST00000215587 CCP110O43303 1012 aa17.63■□□□□ 0.41
POLR2E-201ENST00000215587 TLL1O43897 1013 aa17.63■□□□□ 0.41
POLR2E-201ENST00000215587 FAM228BP0C875 321 aa17.63■□□□□ 0.41
POLR2E-201ENST00000215587 CHRNB2P17787 502 aa17.63■□□□□ 0.41
POLR2E-201ENST00000215587 PBX3P40426 434 aa17.63■□□□□ 0.41
POLR2E-201ENST00000215587 FMO1Q01740 532 aa17.63■□□□□ 0.41
POLR2E-201ENST00000215587 GFPT1Q06210 699 aaPredicted RBP17.63■□□□□ 0.41
POLR2E-201ENST00000215587 RASIP1Q5U651 963 aa17.63■□□□□ 0.41
POLR2E-201ENST00000215587 OVOS1Q6IE37 1185 aa17.63■□□□□ 0.41
POLR2E-201ENST00000215587 TXLNBQ8N3L3 684 aa17.63■□□□□ 0.41
POLR2E-201ENST00000215587 COLGALT1Q8NBJ5 622 aa17.63■□□□□ 0.41
POLR2E-201ENST00000215587 ZNF606Q8WXB4 792 aa17.63■□□□□ 0.41
POLR2E-201ENST00000215587 RNPC3Q96LT9 517 aaKnown RBP17.63■□□□□ 0.41
POLR2E-201ENST00000215587 DDX43Q9NXZ2 648 aaKnown RBP17.63■□□□□ 0.41
POLR2E-201ENST00000215587 CEP83Q9Y592 693 aa17.63■□□□□ 0.41
POLR2E-201ENST00000215587 ADGRG1Q9Y653 693 aa17.63■□□□□ 0.41
POLR2E-201ENST00000215587 ZSCAN12O43309 604 aa17.62■□□□□ 0.41
POLR2E-201ENST00000215587 LCA5LO95447 670 aa17.62■□□□□ 0.41
POLR2E-201ENST00000215587 LMO2P25791 158 aa17.62■□□□□ 0.41
POLR2E-201ENST00000215587 MSNP26038 577 aaKnown RBP17.62■□□□□ 0.41
POLR2E-201ENST00000215587 TKTP29401 623 aaKnown RBP17.62■□□□□ 0.41
POLR2E-201ENST00000215587 PPM1AP35813 382 aa17.62■□□□□ 0.41
POLR2E-201ENST00000215587 YWHAHQ04917 246 aaPredicted RBP17.62■□□□□ 0.41
POLR2E-201ENST00000215587 CCDC122Q5T0U0 273 aa17.62■□□□□ 0.41
POLR2E-201ENST00000215587 C10orf76Q5T2E6 689 aa17.62■□□□□ 0.41
POLR2E-201ENST00000215587 FAM171A1Q5VUB5 890 aa17.62■□□□□ 0.41
POLR2E-201ENST00000215587 ALKBH5Q6P6C2 394 aaKnown RBP17.62■□□□□ 0.41
POLR2E-201ENST00000215587 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.62■□□□□ 0.41
POLR2E-201ENST00000215587 KIAA1328Q86T90 577 aa17.62■□□□□ 0.41
POLR2E-201ENST00000215587 CRYBG2Q8N1P7 616 aa17.62■□□□□ 0.41
POLR2E-201ENST00000215587 ACRBPQ8NEB7 543 aa17.62■□□□□ 0.41
POLR2E-201ENST00000215587 SLC30A5Q8TAD4 765 aa17.62■□□□□ 0.41
POLR2E-201ENST00000215587 LNX1Q8TBB1 728 aaPredicted RBP17.62■□□□□ 0.41
POLR2E-201ENST00000215587 TFAP2BQ92481 460 aa17.62■□□□□ 0.41
POLR2E-201ENST00000215587 IGSF21Q96ID5 467 aa17.62■□□□□ 0.41
POLR2E-201ENST00000215587 SYT15Q9BQS2 421 aa17.62■□□□□ 0.41
POLR2E-201ENST00000215587 SPG21Q9NZD8 308 aa17.62■□□□□ 0.41
POLR2E-201ENST00000215587 CDH9Q9ULB4 789 aa17.62■□□□□ 0.41
POLR2E-201ENST00000215587 LSM8O95777 96 aaKnown RBP17.61■□□□□ 0.41
POLR2E-201ENST00000215587 PTPN1P18031 435 aaKnown RBP17.61■□□□□ 0.41
POLR2E-201ENST00000215587 CYP27A1Q02318 531 aa17.61■□□□□ 0.41
POLR2E-201ENST00000215587 PPP1R2P3Q6NXS1 205 aa17.61■□□□□ 0.41
POLR2E-201ENST00000215587 SLC39A11Q8N1S5 342 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms