RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 ATP6V0A1Q93050 837 aa12.09□□□□□ -0.47
DNMT3B-201ENST00000201963 ARHGEF26Q96DR7 871 aa12.09□□□□□ -0.47
DNMT3B-201ENST00000201963 KLRG1Q96E93 195 aa12.09□□□□□ -0.47
DNMT3B-201ENST00000201963 TBC1D10AQ9BXI6 508 aa12.09□□□□□ -0.47
DNMT3B-201ENST00000201963 CHCHD3Q9NX63 227 aaKnown RBP12.09□□□□□ -0.47
DNMT3B-201ENST00000201963 WHRNQ9P202 907 aa12.09□□□□□ -0.47
DNMT3B-201ENST00000201963 CEP290O15078 2479 aa12.09□□□□□ -0.47
DNMT3B-201ENST00000201963 ZBBXA8MT70 800 aa12.09□□□□□ -0.47
DNMT3B-201ENST00000201963 RARAP10276 462 aa12.09□□□□□ -0.47
DNMT3B-201ENST00000201963 MCF2P10911 925 aa12.09□□□□□ -0.47
DNMT3B-201ENST00000201963 MYL2P10916 166 aa12.09□□□□□ -0.47
DNMT3B-201ENST00000201963 EEF1DP29692 281 aaKnown RBP12.09□□□□□ -0.47
DNMT3B-201ENST00000201963 PTDSS1P48651 473 aaKnown RBP12.09□□□□□ -0.47
DNMT3B-201ENST00000201963 WASHC2DQ5SRD0 308 aa12.09□□□□□ -0.47
DNMT3B-201ENST00000201963 LRRC55Q6ZSA7 311 aa12.09□□□□□ -0.47
DNMT3B-201ENST00000201963 SLC25A41Q8N5S1 370 aa12.09□□□□□ -0.47
DNMT3B-201ENST00000201963 FAM149B1Q96BN6 582 aa12.09□□□□□ -0.47
DNMT3B-201ENST00000201963 RUSC1Q9BVN2 902 aa12.09□□□□□ -0.47
DNMT3B-201ENST00000201963 FOXP3Q9BZS1 431 aa12.09□□□□□ -0.47
DNMT3B-201ENST00000201963 UPF3AQ9H1J1 476 aaKnown RBP12.09□□□□□ -0.47
DNMT3B-201ENST00000201963 CYP39A1Q9NYL5 469 aa12.09□□□□□ -0.47
DNMT3B-201ENST00000201963 HSPBP1Q9NZL4 362 aa12.09□□□□□ -0.47
DNMT3B-201ENST00000201963 KIAA0391O15091 583 aaKnown RBP12.09□□□□□ -0.47
DNMT3B-201ENST00000201963 SGPL1O95470 568 aa12.09□□□□□ -0.47
DNMT3B-201ENST00000201963 ROR2Q01974 943 aaKnown RBP12.09□□□□□ -0.47
DNMT3B-201ENST00000201963 IRGCQ6NXR0 463 aa12.09□□□□□ -0.47
DNMT3B-201ENST00000201963 ZBTB33Q86T24 672 aa12.09□□□□□ -0.47
DNMT3B-201ENST00000201963 THAP11Q96EK4 314 aa12.09□□□□□ -0.47
DNMT3B-201ENST00000201963 FAM163AQ96GL9 167 aaPredicted RBP12.09□□□□□ -0.47
DNMT3B-201ENST00000201963 PPP1R36Q96LQ0 422 aa12.09□□□□□ -0.47
DNMT3B-201ENST00000201963 MKNK1Q9BUB5 465 aa12.09□□□□□ -0.47
DNMT3B-201ENST00000201963 NEUROG2Q9H2A3 272 aa12.09□□□□□ -0.47
DNMT3B-201ENST00000201963 KCNH4Q9UQ05 1017 aa12.09□□□□□ -0.47
DNMT3B-201ENST00000201963 RNF103-CHMP3A0A140T963 221 aa12.08□□□□□ -0.47
DNMT3B-201ENST00000201963 ESYT2A0FGR8 921 aa12.08□□□□□ -0.47
DNMT3B-201ENST00000201963 P4HA1P13674 534 aa12.08□□□□□ -0.47
DNMT3B-201ENST00000201963 PRAMEP78395 509 aa12.08□□□□□ -0.47
DNMT3B-201ENST00000201963 SLC34A1Q06495 639 aa12.08□□□□□ -0.47
DNMT3B-201ENST00000201963 EXOC3L1Q86VI1 746 aa12.08□□□□□ -0.47
DNMT3B-201ENST00000201963 CKAP2Q8WWK9 683 aa12.08□□□□□ -0.47
DNMT3B-201ENST00000201963 SSX2IPQ9Y2D8 614 aa12.08□□□□□ -0.47
DNMT3B-201ENST00000201963 INPP5FQ9Y2H2 1132 aa12.08□□□□□ -0.47
DNMT3B-201ENST00000201963 GAKO14976 1311 aa12.08□□□□□ -0.48
DNMT3B-201ENST00000201963 K7ERI5 159 aa12.08□□□□□ -0.48
DNMT3B-201ENST00000201963 AHCYL1O43865 530 aa12.08□□□□□ -0.48
DNMT3B-201ENST00000201963 TFDP2Q14188 446 aa12.08□□□□□ -0.48
DNMT3B-201ENST00000201963 LRRC74BQ6ZQY2 392 aa12.08□□□□□ -0.48
DNMT3B-201ENST00000201963 SLC7A3Q8WY07 619 aa12.08□□□□□ -0.48
DNMT3B-201ENST00000201963 HAUS8Q9BT25 410 aa12.08□□□□□ -0.48
DNMT3B-201ENST00000201963 KIAA1683Q9H0B3 1180 aa12.08□□□□□ -0.48
DNMT3B-201ENST00000201963 JMJD4Q9H9V9 463 aa12.08□□□□□ -0.48
DNMT3B-201ENST00000201963 AGPAT3Q9NRZ7 376 aa12.08□□□□□ -0.48
DNMT3B-201ENST00000201963 PCMTD2Q9NV79 361 aa12.08□□□□□ -0.48
DNMT3B-201ENST00000201963 LGR5O75473 907 aa12.08□□□□□ -0.48
DNMT3B-201ENST00000201963 ALDH1A1P00352 501 aa12.08□□□□□ -0.48
DNMT3B-201ENST00000201963 ZNF200P98182 395 aaPredicted RBP12.08□□□□□ -0.48
DNMT3B-201ENST00000201963 PPATQ06203 517 aa12.08□□□□□ -0.48
DNMT3B-201ENST00000201963 STXBP2Q15833 593 aa12.08□□□□□ -0.48
DNMT3B-201ENST00000201963 NBPF20Q3BBV1 942 aa12.08□□□□□ -0.48
DNMT3B-201ENST00000201963 SCUBE1Q8IWY4 988 aa12.08□□□□□ -0.48
DNMT3B-201ENST00000201963 NSUN6Q8TEA1 469 aaKnown RBP12.08□□□□□ -0.48
DNMT3B-201ENST00000201963 ACSF2Q96CM8 615 aaPredicted RBP12.08□□□□□ -0.48
DNMT3B-201ENST00000201963 RNF208Q9H0X6 261 aa12.08□□□□□ -0.48
DNMT3B-201ENST00000201963 WARS2Q9UGM6 360 aaKnown RBP12.08□□□□□ -0.48
DNMT3B-201ENST00000201963 PECAM1P16284 738 aaPredicted RBP12.08□□□□□ -0.48
DNMT3B-201ENST00000201963 STX1BP61266 288 aa12.08□□□□□ -0.48
DNMT3B-201ENST00000201963 FKBP1AP62942 108 aaKnown RBP12.08□□□□□ -0.48
DNMT3B-201ENST00000201963 NFX1Q12986 1120 aaKnown RBP12.08□□□□□ -0.48
DNMT3B-201ENST00000201963 LACTB2Q53H82 288 aaPredicted RBP12.08□□□□□ -0.48
DNMT3B-201ENST00000201963 ZBTB8OSQ8IWT0 167 aa12.08□□□□□ -0.48
DNMT3B-201ENST00000201963 HDAC11Q96DB2 347 aa12.08□□□□□ -0.48
DNMT3B-201ENST00000201963 WNK4Q96J92 1243 aa12.08□□□□□ -0.48
DNMT3B-201ENST00000201963 PI4K2AQ9BTU6 479 aa12.08□□□□□ -0.48
DNMT3B-201ENST00000201963 SLCO1B3Q9NPD5 702 aa12.08□□□□□ -0.48
DNMT3B-201ENST00000201963 MYH14Q7Z406 1995 aaKnown RBP12.07□□□□□ -0.48
DNMT3B-201ENST00000201963 XPO1O14980 1071 aaKnown RBP12.07□□□□□ -0.48
DNMT3B-201ENST00000201963 USP2O75604 605 aaPredicted RBP12.07□□□□□ -0.48
DNMT3B-201ENST00000201963 CALB1P05937 261 aa12.07□□□□□ -0.48
DNMT3B-201ENST00000201963 MMP13P45452 471 aa12.07□□□□□ -0.48
DNMT3B-201ENST00000201963 GEMIN4P57678 1058 aaKnown RBP12.07□□□□□ -0.48
DNMT3B-201ENST00000201963 EIF3EP60228 445 aaKnown RBP12.07□□□□□ -0.48
DNMT3B-201ENST00000201963 SLC44A4Q53GD3 710 aa12.07□□□□□ -0.48
DNMT3B-201ENST00000201963 ACBD5Q5T8D3 534 aaPredicted RBP12.07□□□□□ -0.48
DNMT3B-201ENST00000201963 E2F7Q96AV8 911 aa12.07□□□□□ -0.48
DNMT3B-201ENST00000201963 DDX50Q9BQ39 737 aaKnown RBP12.07□□□□□ -0.48
DNMT3B-201ENST00000201963 MSTO1Q9BUK6 570 aa12.07□□□□□ -0.48
DNMT3B-201ENST00000201963 CXCL11O14625 94 aa12.07□□□□□ -0.48
DNMT3B-201ENST00000201963 AIM2O14862 343 aa12.07□□□□□ -0.48
DNMT3B-201ENST00000201963 MGRN1O60291 552 aa12.07□□□□□ -0.48
DNMT3B-201ENST00000201963 APRTP07741 180 aa12.07□□□□□ -0.48
DNMT3B-201ENST00000201963 WEE2P0C1S8 567 aa12.07□□□□□ -0.48
DNMT3B-201ENST00000201963 ENO3P13929 434 aaPredicted RBP12.07□□□□□ -0.48
DNMT3B-201ENST00000201963 FECHP22830 423 aa12.07□□□□□ -0.48
DNMT3B-201ENST00000201963 TYK2P29597 1187 aa12.07□□□□□ -0.48
DNMT3B-201ENST00000201963 CCND2P30279 289 aa12.07□□□□□ -0.48
DNMT3B-201ENST00000201963 APLP1P51693 650 aa12.07□□□□□ -0.48
DNMT3B-201ENST00000201963 SP3Q02447 781 aa12.07□□□□□ -0.48
DNMT3B-201ENST00000201963 GIT2Q14161 759 aa12.07□□□□□ -0.48
DNMT3B-201ENST00000201963 CHI3L2Q15782 390 aa12.07□□□□□ -0.48
DNMT3B-201ENST00000201963 ISLR2Q6UXK2 745 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms