RNA–Protein interactions for RNA: ENST00000175091.4

LAPTM4A-201, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4A, Length 1,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-201ENST00000175091 PARVAQ9NVD7 372 aa16.56■□□□□ 0.24
LAPTM4A-201ENST00000175091 CCDC66A2RUB6 948 aa16.56■□□□□ 0.24
LAPTM4A-201ENST00000175091 PEX5P50542 639 aa16.56■□□□□ 0.24
LAPTM4A-201ENST00000175091 PTPN20Q4JDL3 420 aa16.56■□□□□ 0.24
LAPTM4A-201ENST00000175091 SGO2Q562F6 1265 aa16.56■□□□□ 0.24
LAPTM4A-201ENST00000175091 PHLDB2Q86SQ0 1253 aa16.56■□□□□ 0.24
LAPTM4A-201ENST00000175091 GSTCDQ8NEC7 633 aa16.56■□□□□ 0.24
LAPTM4A-201ENST00000175091 GDAP2Q9NXN4 497 aa16.56■□□□□ 0.24
LAPTM4A-201ENST00000175091 CYTH4Q9UIA0 394 aa16.56■□□□□ 0.24
LAPTM4A-201ENST00000175091 NME7Q9Y5B8 376 aa16.56■□□□□ 0.24
LAPTM4A-201ENST00000175091 TSC2P49815 1807 aa16.55■□□□□ 0.24
LAPTM4A-201ENST00000175091 MYO1FO00160 1098 aa16.55■□□□□ 0.24
LAPTM4A-201ENST00000175091 SPTLC1O15269 473 aa16.55■□□□□ 0.24
LAPTM4A-201ENST00000175091 MICAL2O94851 1124 aa16.55■□□□□ 0.24
LAPTM4A-201ENST00000175091 PROSCO94903 275 aa16.55■□□□□ 0.24
LAPTM4A-201ENST00000175091 ITGA4P13612 1032 aa16.55■□□□□ 0.24
LAPTM4A-201ENST00000175091 MLH1P40692 756 aa16.55■□□□□ 0.24
LAPTM4A-201ENST00000175091 SLC1A1P43005 524 aa16.55■□□□□ 0.24
LAPTM4A-201ENST00000175091 TAF6P49848 677 aa16.55■□□□□ 0.24
LAPTM4A-201ENST00000175091 RAB27AP51159 221 aa16.55■□□□□ 0.24
LAPTM4A-201ENST00000175091 GSCP56915 257 aaPredicted RBP16.55■□□□□ 0.24
LAPTM4A-201ENST00000175091 RNASE9P60153 205 aaKnown RBP16.55■□□□□ 0.24
LAPTM4A-201ENST00000175091 DSC3Q14574 896 aa16.55■□□□□ 0.24
LAPTM4A-201ENST00000175091 CNGA2Q16280 664 aa16.55■□□□□ 0.24
LAPTM4A-201ENST00000175091 PPP1R15BQ5SWA1 713 aa16.55■□□□□ 0.24
LAPTM4A-201ENST00000175091 CCDC70Q6NSX1 233 aa16.55■□□□□ 0.24
LAPTM4A-201ENST00000175091 ERICH1Q86X53 443 aa16.55■□□□□ 0.24
LAPTM4A-201ENST00000175091 C3orf20Q8ND61 904 aa16.55■□□□□ 0.24
LAPTM4A-201ENST00000175091 RUBCNQ92622 972 aa16.55■□□□□ 0.24
LAPTM4A-201ENST00000175091 ZNF446Q9NWS9 450 aa16.55■□□□□ 0.24
LAPTM4A-201ENST00000175091 KIAA1257Q9ULG3 409 aa16.55■□□□□ 0.24
LAPTM4A-201ENST00000175091 STRIP2Q9ULQ0 834 aa16.55■□□□□ 0.24
LAPTM4A-201ENST00000175091 PCDHA3Q9Y5H8 950 aa16.55■□□□□ 0.24
LAPTM4A-201ENST00000175091 SQORQ9Y6N5 450 aa16.55■□□□□ 0.24
LAPTM4A-201ENST00000175091 KPNA7A9QM74 516 aa16.54■□□□□ 0.24
LAPTM4A-201ENST00000175091 M0QYV0 167 aa16.54■□□□□ 0.24
LAPTM4A-201ENST00000175091 MGEA5O60502 916 aa16.54■□□□□ 0.24
LAPTM4A-201ENST00000175091 SOWAHAQ2M3V2 549 aa16.54■□□□□ 0.24
LAPTM4A-201ENST00000175091 SV2CQ496J9 727 aa16.54■□□□□ 0.24
LAPTM4A-201ENST00000175091 ZNF618Q5T7W0 954 aa16.54■□□□□ 0.24
LAPTM4A-201ENST00000175091 C8orf74Q6P047 294 aa16.54■□□□□ 0.24
LAPTM4A-201ENST00000175091 CC2D1AQ6P1N0 951 aaPredicted RBP16.54■□□□□ 0.24
LAPTM4A-201ENST00000175091 DNAJC24Q6P3W2 148 aa16.54■□□□□ 0.24
LAPTM4A-201ENST00000175091 LIMS2Q7Z4I7 341 aa16.54■□□□□ 0.24
LAPTM4A-201ENST00000175091 MRPL10Q7Z7H8 261 aaKnown RBP16.54■□□□□ 0.24
LAPTM4A-201ENST00000175091 UNC93AQ86WB7 457 aa16.54■□□□□ 0.24
LAPTM4A-201ENST00000175091 FEZF2Q8TBJ5 459 aa16.54■□□□□ 0.24
LAPTM4A-201ENST00000175091 KBTBD7Q8WVZ9 684 aa16.54■□□□□ 0.24
LAPTM4A-201ENST00000175091 LRRC1Q9BTT6 524 aa16.54■□□□□ 0.24
LAPTM4A-201ENST00000175091 STARD7Q9NQZ5 370 aa16.54■□□□□ 0.24
LAPTM4A-201ENST00000175091 TRIM17Q9Y577 477 aa16.54■□□□□ 0.24
LAPTM4A-201ENST00000175091 ZNF623O75123 536 aa16.54■□□□□ 0.24
LAPTM4A-201ENST00000175091 MAN1A1P33908 653 aa16.54■□□□□ 0.24
LAPTM4A-201ENST00000175091 PDCLQ13371 301 aa16.54■□□□□ 0.24
LAPTM4A-201ENST00000175091 STILQ15468 1287 aa16.54■□□□□ 0.24
LAPTM4A-201ENST00000175091 GLE1Q53GS7 698 aaKnown RBP16.54■□□□□ 0.24
LAPTM4A-201ENST00000175091 TMCO3Q6UWJ1 677 aa16.54■□□□□ 0.24
LAPTM4A-201ENST00000175091 LCLAT1Q6UWP7 414 aa16.54■□□□□ 0.24
LAPTM4A-201ENST00000175091 AGMOQ6ZNB7 445 aa16.54■□□□□ 0.24
LAPTM4A-201ENST00000175091 HNRNPLLQ8WVV9 542 aaKnown RBP16.54■□□□□ 0.24
LAPTM4A-201ENST00000175091 HEXIM2Q96MH2 286 aaKnown RBP16.54■□□□□ 0.24
LAPTM4A-201ENST00000175091 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.54■□□□□ 0.24
LAPTM4A-201ENST00000175091 SLC38A7Q9NVC3 462 aa16.54■□□□□ 0.24
LAPTM4A-201ENST00000175091 TSPAN16Q9UKR8 245 aa16.54■□□□□ 0.24
LAPTM4A-201ENST00000175091 PHF24Q9UPV7 400 aa16.54■□□□□ 0.24
LAPTM4A-201ENST00000175091 GIT1Q9Y2X7 761 aa16.54■□□□□ 0.24
LAPTM4A-201ENST00000175091 A0A0U1RQG5 324 aaPredicted RBP16.53■□□□□ 0.24
LAPTM4A-201ENST00000175091 CCDC188H7C350 402 aa16.53■□□□□ 0.24
LAPTM4A-201ENST00000175091 ZRANB2O95218 330 aaKnown RBP eCLIP16.53■□□□□ 0.24
LAPTM4A-201ENST00000175091 GJB6O95452 261 aa16.53■□□□□ 0.24
LAPTM4A-201ENST00000175091 FGGP02679 453 aa16.53■□□□□ 0.24
LAPTM4A-201ENST00000175091 CKBP12277 381 aa16.53■□□□□ 0.24
LAPTM4A-201ENST00000175091 MCM3P25205 808 aa16.53■□□□□ 0.24
LAPTM4A-201ENST00000175091 GPD2P43304 727 aa16.53■□□□□ 0.24
LAPTM4A-201ENST00000175091 RPL7AP62424 266 aaKnown RBP16.53■□□□□ 0.24
LAPTM4A-201ENST00000175091 ZNF211Q13398 564 aaPredicted RBP16.53■□□□□ 0.24
LAPTM4A-201ENST00000175091 CLUL1Q15846 466 aa16.53■□□□□ 0.24
LAPTM4A-201ENST00000175091 CYP4A22Q5TCH4 519 aa16.53■□□□□ 0.24
LAPTM4A-201ENST00000175091 TRAF7Q6Q0C0 670 aa16.53■□□□□ 0.24
LAPTM4A-201ENST00000175091 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.53■□□□□ 0.24
LAPTM4A-201ENST00000175091 LPPQ93052 612 aa16.53■□□□□ 0.24
LAPTM4A-201ENST00000175091 CPXM1Q96SM3 734 aa16.53■□□□□ 0.24
LAPTM4A-201ENST00000175091 GAD1Q99259 594 aa16.53■□□□□ 0.24
LAPTM4A-201ENST00000175091 LCMT1Q9UIC8 334 aa16.53■□□□□ 0.24
LAPTM4A-201ENST00000175091 L1RE1Q9UN81 338 aa16.53■□□□□ 0.24
LAPTM4A-201ENST00000175091 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.53■□□□□ 0.24
LAPTM4A-201ENST00000175091 TMEM191CA6NGB0 347 aa16.52■□□□□ 0.24
LAPTM4A-201ENST00000175091 ARL5CA6NH57 179 aa16.52■□□□□ 0.24
LAPTM4A-201ENST00000175091 LILRA4P59901 499 aa16.52■□□□□ 0.24
LAPTM4A-201ENST00000175091 TAP1Q03518 808 aa16.52■□□□□ 0.24
LAPTM4A-201ENST00000175091 ZNF252P-AS1Q0IIN9 211 aa16.52■□□□□ 0.24
LAPTM4A-201ENST00000175091 C12orf29Q8N999 325 aa16.52■□□□□ 0.24
LAPTM4A-201ENST00000175091 SH3TC2Q8TF17 1288 aa16.52■□□□□ 0.24
LAPTM4A-201ENST00000175091 HDAC7Q8WUI4 952 aa16.52■□□□□ 0.24
LAPTM4A-201ENST00000175091 MCEEQ96PE7 176 aa16.52■□□□□ 0.24
LAPTM4A-201ENST00000175091 KRT12Q99456 494 aa16.52■□□□□ 0.24
LAPTM4A-201ENST00000175091 NAP1L3Q99457 506 aaPredicted RBP16.52■□□□□ 0.24
LAPTM4A-201ENST00000175091 TRPV6Q9H1D0 765 aa16.52■□□□□ 0.24
LAPTM4A-201ENST00000175091 STIM2Q9P246 746 aa16.52■□□□□ 0.24
LAPTM4A-201ENST00000175091 TJP2Q9UDY2 1190 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms