RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 A0A0U1RQF3 1178 aa20.89■□□□□ 0.94
TNFRSF1A-201ENST00000162749 ARL5CA6NH57 179 aa20.89■□□□□ 0.94
TNFRSF1A-201ENST00000162749 KCNK3O14649 394 aa20.89■□□□□ 0.94
TNFRSF1A-201ENST00000162749 MED7O43513 233 aa20.89■□□□□ 0.94
TNFRSF1A-201ENST00000162749 LRPAP1P30533 357 aa20.89■□□□□ 0.94
TNFRSF1A-201ENST00000162749 RAB27AP51159 221 aa20.89■□□□□ 0.94
TNFRSF1A-201ENST00000162749 PHLDB2Q86SQ0 1253 aa20.89■□□□□ 0.94
TNFRSF1A-201ENST00000162749 MS4A14Q96JA4 679 aa20.89■□□□□ 0.94
TNFRSF1A-201ENST00000162749 ADAM2Q99965 735 aa20.89■□□□□ 0.94
TNFRSF1A-201ENST00000162749 NT5C1AQ9BXI3 368 aa20.89■□□□□ 0.94
TNFRSF1A-201ENST00000162749 SMARCAL1Q9NZC9 954 aa20.89■□□□□ 0.94
TNFRSF1A-201ENST00000162749 L1RE1Q9UN81 338 aa20.89■□□□□ 0.94
TNFRSF1A-201ENST00000162749 GIT1Q9Y2X7 761 aa20.89■□□□□ 0.94
TNFRSF1A-201ENST00000162749 KPNA7A9QM74 516 aa20.89■□□□□ 0.93
TNFRSF1A-201ENST00000162749 PNPLA4P41247 253 aa20.89■□□□□ 0.93
TNFRSF1A-201ENST00000162749 CDK7P50613 346 aa20.89■□□□□ 0.93
TNFRSF1A-201ENST00000162749 MESDQ14696 234 aa20.89■□□□□ 0.93
TNFRSF1A-201ENST00000162749 SOWAHAQ2M3V2 549 aa20.89■□□□□ 0.93
TNFRSF1A-201ENST00000162749 WDR93Q6P2C0 686 aa20.89■□□□□ 0.93
TNFRSF1A-201ENST00000162749 RPGRIP1Q96KN7 1286 aa20.89■□□□□ 0.93
TNFRSF1A-201ENST00000162749 GDAP2Q9NXN4 497 aa20.89■□□□□ 0.93
TNFRSF1A-201ENST00000162749 CEP83Q9Y592 693 aa20.89■□□□□ 0.93
TNFRSF1A-201ENST00000162749 NME7Q9Y5B8 376 aa20.89■□□□□ 0.93
TNFRSF1A-201ENST00000162749 TAF6P49848 677 aa20.88■□□□□ 0.93
TNFRSF1A-201ENST00000162749 ZNF572Q7Z3I7 529 aaPredicted RBP20.88■□□□□ 0.93
TNFRSF1A-201ENST00000162749 HEXIM2Q96MH2 286 aaKnown RBP20.88■□□□□ 0.93
TNFRSF1A-201ENST00000162749 RPS6KC1Q96S38 1066 aa20.88■□□□□ 0.93
TNFRSF1A-201ENST00000162749 LHX5Q9H2C1 402 aa20.88■□□□□ 0.93
TNFRSF1A-201ENST00000162749 WBP1LQ9NX94 342 aa20.88■□□□□ 0.93
TNFRSF1A-201ENST00000162749 MIOSQ9NXC5 875 aa20.88■□□□□ 0.93
TNFRSF1A-201ENST00000162749 KIAA0100Q14667 2235 aaKnown RBP20.88■□□□□ 0.93
TNFRSF1A-201ENST00000162749 CES2O00748 559 aa20.88■□□□□ 0.93
TNFRSF1A-201ENST00000162749 LILRA4P59901 499 aa20.88■□□□□ 0.93
TNFRSF1A-201ENST00000162749 CCDC181Q5TID7 509 aa20.88■□□□□ 0.93
TNFRSF1A-201ENST00000162749 LIN9Q5TKA1 542 aa20.88■□□□□ 0.93
TNFRSF1A-201ENST00000162749 DENND1BQ6P3S1 775 aa20.88■□□□□ 0.93
TNFRSF1A-201ENST00000162749 TRIM7Q9C029 511 aa20.88■□□□□ 0.93
TNFRSF1A-201ENST00000162749 SLC38A7Q9NVC3 462 aa20.88■□□□□ 0.93
TNFRSF1A-201ENST00000162749 RNF14Q9UBS8 474 aa20.88■□□□□ 0.93
TNFRSF1A-201ENST00000162749 ANAPC7Q9UJX3 599 aa20.88■□□□□ 0.93
TNFRSF1A-201ENST00000162749 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.88■□□□□ 0.93
TNFRSF1A-201ENST00000162749 O00370 1275 aa20.87■□□□□ 0.93
TNFRSF1A-201ENST00000162749 THP07101 528 aa20.87■□□□□ 0.93
TNFRSF1A-201ENST00000162749 VDRP11473 427 aa20.87■□□□□ 0.93
TNFRSF1A-201ENST00000162749 SMC1AQ14683 1233 aaKnown RBP20.87■□□□□ 0.93
TNFRSF1A-201ENST00000162749 CFAP221Q4G0U5 840 aa20.87■□□□□ 0.93
TNFRSF1A-201ENST00000162749 PLEKHA7Q6IQ23 1121 aa20.87■□□□□ 0.93
TNFRSF1A-201ENST00000162749 RNF208Q9H0X6 261 aa20.87■□□□□ 0.93
TNFRSF1A-201ENST00000162749 TSPYL2Q9H2G4 693 aaPredicted RBP20.87■□□□□ 0.93
TNFRSF1A-201ENST00000162749 RNF216Q9NWF9 866 aaPredicted RBP20.87■□□□□ 0.93
TNFRSF1A-201ENST00000162749 TMEM110-MUSTN1A8MSY1 372 aa20.86■□□□□ 0.93
TNFRSF1A-201ENST00000162749 ERLIN1O75477 346 aa20.86■□□□□ 0.93
TNFRSF1A-201ENST00000162749 TUBBP07437 444 aa20.86■□□□□ 0.93
TNFRSF1A-201ENST00000162749 COMTP21964 271 aa20.86■□□□□ 0.93
TNFRSF1A-201ENST00000162749 SCNN1GP51170 649 aa20.86■□□□□ 0.93
TNFRSF1A-201ENST00000162749 MAMLD1Q13495 774 aa20.86■□□□□ 0.93
TNFRSF1A-201ENST00000162749 SV2CQ496J9 727 aa20.86■□□□□ 0.93
TNFRSF1A-201ENST00000162749 SGO2Q562F6 1265 aa20.86■□□□□ 0.93
TNFRSF1A-201ENST00000162749 FAM126BQ8IXS8 530 aa20.86■□□□□ 0.93
TNFRSF1A-201ENST00000162749 C12orf29Q8N999 325 aa20.86■□□□□ 0.93
TNFRSF1A-201ENST00000162749 RNF169Q8NCN4 708 aa20.86■□□□□ 0.93
TNFRSF1A-201ENST00000162749 KBTBD7Q8WVZ9 684 aa20.86■□□□□ 0.93
TNFRSF1A-201ENST00000162749 CACNG4Q9UBN1 327 aa20.86■□□□□ 0.93
TNFRSF1A-201ENST00000162749 CYTH4Q9UIA0 394 aa20.86■□□□□ 0.93
TNFRSF1A-201ENST00000162749 OGDHLQ9ULD0 1010 aa20.86■□□□□ 0.93
TNFRSF1A-201ENST00000162749 DDX3YO15523 660 aaKnown RBP20.86■□□□□ 0.93
TNFRSF1A-201ENST00000162749 CCL5P13501 91 aa20.86■□□□□ 0.93
TNFRSF1A-201ENST00000162749 PAFAH1B1P43034 410 aa20.86■□□□□ 0.93
TNFRSF1A-201ENST00000162749 ITIH3Q06033 890 aa20.86■□□□□ 0.93
TNFRSF1A-201ENST00000162749 CNGA2Q16280 664 aa20.86■□□□□ 0.93
TNFRSF1A-201ENST00000162749 SPATA4Q8NEY3 305 aa20.86■□□□□ 0.93
TNFRSF1A-201ENST00000162749 PBKQ96KB5 322 aa20.86■□□□□ 0.93
TNFRSF1A-201ENST00000162749 RSAD1Q9HA92 442 aa20.86■□□□□ 0.93
TNFRSF1A-201ENST00000162749 SCN5AQ14524 2016 aa20.85■□□□□ 0.93
TNFRSF1A-201ENST00000162749 MICAL2O94851 1124 aa20.85■□□□□ 0.93
TNFRSF1A-201ENST00000162749 CALB1P05937 261 aa20.85■□□□□ 0.93
TNFRSF1A-201ENST00000162749 DPH6Q7L8W6 267 aa20.85■□□□□ 0.93
TNFRSF1A-201ENST00000162749 LIMS2Q7Z4I7 341 aa20.85■□□□□ 0.93
TNFRSF1A-201ENST00000162749 CPNE8Q86YQ8 564 aa20.85■□□□□ 0.93
TNFRSF1A-201ENST00000162749 SEZ6LQ9BYH1 1024 aa20.85■□□□□ 0.93
TNFRSF1A-201ENST00000162749 MRPL47Q9HD33 250 aaKnown RBP20.85■□□□□ 0.93
TNFRSF1A-201ENST00000162749 KIAA1257Q9ULG3 409 aa20.85■□□□□ 0.93
TNFRSF1A-201ENST00000162749 SCINQ9Y6U3 715 aa20.85■□□□□ 0.93
TNFRSF1A-201ENST00000162749 IBSPP21815 317 aaPredicted RBP20.85■□□□□ 0.93
TNFRSF1A-201ENST00000162749 IGFBP6P24592 240 aaPredicted RBP20.85■□□□□ 0.93
TNFRSF1A-201ENST00000162749 C2orf54Q08AI8 447 aa20.85■□□□□ 0.93
TNFRSF1A-201ENST00000162749 PTPN20Q4JDL3 420 aa20.85■□□□□ 0.93
TNFRSF1A-201ENST00000162749 DCAF12L1Q5VU92 463 aa20.85■□□□□ 0.93
TNFRSF1A-201ENST00000162749 ACOT1Q86TX2 421 aa20.85■□□□□ 0.93
TNFRSF1A-201ENST00000162749 UNC93AQ86WB7 457 aa20.85■□□□□ 0.93
TNFRSF1A-201ENST00000162749 ERICH1Q86X53 443 aa20.85■□□□□ 0.93
TNFRSF1A-201ENST00000162749 OR6B3Q8NGW1 331 aa20.85■□□□□ 0.93
TNFRSF1A-201ENST00000162749 CD101Q93033 1021 aa20.85■□□□□ 0.93
TNFRSF1A-201ENST00000162749 PARVAQ9NVD7 372 aa20.85■□□□□ 0.93
TNFRSF1A-201ENST00000162749 M0QYV0 167 aa20.84■□□□□ 0.93
TNFRSF1A-201ENST00000162749 HSPA6P17066 643 aa20.84■□□□□ 0.93
TNFRSF1A-201ENST00000162749 LRRC8DQ7L1W4 858 aa20.84■□□□□ 0.93
TNFRSF1A-201ENST00000162749 HDXQ7Z353 690 aa20.84■□□□□ 0.93
TNFRSF1A-201ENST00000162749 APPL2Q8NEU8 664 aa20.84■□□□□ 0.93
TNFRSF1A-201ENST00000162749 ALG3Q92685 438 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms