RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 TMEM191CA6NGB0 347 aa8.74□□□□□ -1.01
CDC27-201ENST00000066544 DNALI1O14645 258 aaPredicted RBP8.74□□□□□ -1.01
CDC27-201ENST00000066544 TJP3O95049 919 aa8.74□□□□□ -1.01
CDC27-201ENST00000066544 CD48P09326 243 aa8.74□□□□□ -1.01
CDC27-201ENST00000066544 RPA3P35244 121 aaPredicted RBP8.74□□□□□ -1.01
CDC27-201ENST00000066544 GDF10P55107 478 aa8.74□□□□□ -1.01
CDC27-201ENST00000066544 PTP4A2Q12974 167 aa8.74□□□□□ -1.01
CDC27-201ENST00000066544 TAF5Q15542 800 aa8.74□□□□□ -1.01
CDC27-201ENST00000066544 SEPT7Q16181 437 aaKnown RBP8.74□□□□□ -1.01
CDC27-201ENST00000066544 DENND1BQ6P3S1 775 aa8.74□□□□□ -1.01
CDC27-201ENST00000066544 NCAPG2Q86XI2 1143 aa8.74□□□□□ -1.01
CDC27-201ENST00000066544 SCYL3Q8IZE3 742 aa8.74□□□□□ -1.01
CDC27-201ENST00000066544 TMEM35BQ8NCS4 154 aa8.74□□□□□ -1.01
CDC27-201ENST00000066544 RDM1Q8NG50 284 aa8.74□□□□□ -1.01
CDC27-201ENST00000066544 HSPH1Q92598 858 aa8.74□□□□□ -1.01
CDC27-201ENST00000066544 CFAP57Q96MR6 1250 aa8.74□□□□□ -1.01
CDC27-201ENST00000066544 MYCBPQ99417 103 aaPredicted RBP8.74□□□□□ -1.01
CDC27-201ENST00000066544 MGRN1O60291 552 aa8.74□□□□□ -1.01
CDC27-201ENST00000066544 GRAP2O75791 330 aa8.74□□□□□ -1.01
CDC27-201ENST00000066544 TARSP26639 723 aaKnown RBP8.74□□□□□ -1.01
CDC27-201ENST00000066544 GCLCP48506 637 aaPredicted RBP8.74□□□□□ -1.01
CDC27-201ENST00000066544 COPS2P61201 443 aa8.74□□□□□ -1.01
CDC27-201ENST00000066544 IGBP1P78318 339 aa8.74□□□□□ -1.01
CDC27-201ENST00000066544 BASP1P80723 227 aaKnown RBP8.74□□□□□ -1.01
CDC27-201ENST00000066544 CAV1Q03135 178 aa8.74□□□□□ -1.01
CDC27-201ENST00000066544 SLC1A5Q15758 541 aa8.74□□□□□ -1.01
CDC27-201ENST00000066544 LY6KQ17RY6 165 aa8.74□□□□□ -1.01
CDC27-201ENST00000066544 RHPN2Q8IUC4 686 aa8.74□□□□□ -1.01
CDC27-201ENST00000066544 ZBED3Q96IU2 234 aaPredicted RBP8.74□□□□□ -1.01
CDC27-201ENST00000066544 CCDC134Q9H6E4 229 aa8.74□□□□□ -1.01
CDC27-201ENST00000066544 KLRC2P26717 231 aa8.74□□□□□ -1.01
CDC27-201ENST00000066544 STAT5BP51692 787 aa8.74□□□□□ -1.01
CDC27-201ENST00000066544 OTUD4Q01804 1114 aaKnown RBP8.74□□□□□ -1.01
CDC27-201ENST00000066544 TFDP1Q14186 410 aa8.74□□□□□ -1.01
CDC27-201ENST00000066544 NEDD9Q14511 834 aa8.74□□□□□ -1.01
CDC27-201ENST00000066544 WDR72Q3MJ13 1102 aa8.74□□□□□ -1.01
CDC27-201ENST00000066544 SYDE1Q6ZW31 735 aaPredicted RBP8.74□□□□□ -1.01
CDC27-201ENST00000066544 ZC3H18Q86VM9 953 aaKnown RBP8.74□□□□□ -1.01
CDC27-201ENST00000066544 RBM41Q96IZ5 413 aaKnown RBP8.74□□□□□ -1.01
CDC27-201ENST00000066544 CDHR1Q96JP9 859 aa8.74□□□□□ -1.01
CDC27-201ENST00000066544 SMC6Q96SB8 1091 aa8.74□□□□□ -1.01
CDC27-201ENST00000066544 SPATA31C2B4DYI2 1134 aa8.73□□□□□ -1.01
CDC27-201ENST00000066544 B4GALT5O43286 388 aa8.73□□□□□ -1.01
CDC27-201ENST00000066544 UBA1P22314 1058 aaKnown RBP8.73□□□□□ -1.01
CDC27-201ENST00000066544 MAP3K10Q02779 954 aa8.73□□□□□ -1.01
CDC27-201ENST00000066544 CDO1Q16878 200 aa8.73□□□□□ -1.01
CDC27-201ENST00000066544 ZNF699Q32M78 642 aa8.73□□□□□ -1.01
CDC27-201ENST00000066544 PREPLQ4J6C6 727 aaPredicted RBP8.73□□□□□ -1.01
CDC27-201ENST00000066544 SLFN12LQ6IEE8 588 aa8.73□□□□□ -1.01
CDC27-201ENST00000066544 PHF13Q86YI8 300 aaPredicted RBP8.73□□□□□ -1.01
CDC27-201ENST00000066544 ZCCHC9Q8N567 271 aaKnown RBP8.73□□□□□ -1.01
CDC27-201ENST00000066544 CXorf56Q9H5V9 222 aa8.73□□□□□ -1.01
CDC27-201ENST00000066544 DHX33Q9H6R0 707 aaKnown RBP8.73□□□□□ -1.01
CDC27-201ENST00000066544 GINM1Q9NU53 330 aa8.73□□□□□ -1.01
CDC27-201ENST00000066544 MYH9P35579 1960 aaKnown RBP8.73□□□□□ -1.01
CDC27-201ENST00000066544 CNTNAP2Q9UHC6 1331 aa8.73□□□□□ -1.01
CDC27-201ENST00000066544 H0YCG3 227 aa8.73□□□□□ -1.01
CDC27-201ENST00000066544 NAMPTP43490 491 aa8.73□□□□□ -1.01
CDC27-201ENST00000066544 PSMC1P62191 440 aaKnown RBP8.73□□□□□ -1.01
CDC27-201ENST00000066544 C1QBPQ07021 282 aaKnown RBP8.73□□□□□ -1.01
CDC27-201ENST00000066544 NAA25Q14CX7 972 aa8.73□□□□□ -1.01
CDC27-201ENST00000066544 SMAD1Q15797 465 aaKnown RBP8.73□□□□□ -1.01
CDC27-201ENST00000066544 TRIM72Q6ZMU5 477 aa8.73□□□□□ -1.01
CDC27-201ENST00000066544 RCOR2Q8IZ40 523 aa8.73□□□□□ -1.01
CDC27-201ENST00000066544 CCDC33Q8N5R6 958 aa8.73□□□□□ -1.01
CDC27-201ENST00000066544 MTMR14Q8NCE2 650 aa8.73□□□□□ -1.01
CDC27-201ENST00000066544 BBOF1Q8ND07 529 aa8.73□□□□□ -1.01
CDC27-201ENST00000066544 HAO1Q9UJM8 370 aa8.73□□□□□ -1.01
CDC27-201ENST00000066544 AFG3L2Q9Y4W6 797 aa8.73□□□□□ -1.01
CDC27-201ENST00000066544 MAFGO15525 162 aa8.73□□□□□ -1.01
CDC27-201ENST00000066544 KRT4P19013 534 aa8.73□□□□□ -1.01
CDC27-201ENST00000066544 TBXAS1P24557 533 aaPredicted RBP8.73□□□□□ -1.01
CDC27-201ENST00000066544 GHRHRQ02643 423 aa8.73□□□□□ -1.01
CDC27-201ENST00000066544 TRABD2AQ86V40 505 aa8.73□□□□□ -1.01
CDC27-201ENST00000066544 TMEM192Q8IY95 271 aa8.73□□□□□ -1.01
CDC27-201ENST00000066544 MAML1Q92585 1016 aa8.73□□□□□ -1.01
CDC27-201ENST00000066544 MAP3K20Q9NYL2 800 aaKnown RBP8.73□□□□□ -1.01
CDC27-201ENST00000066544 DIAPH2O60879 1101 aa8.73□□□□□ -1.01
CDC27-201ENST00000066544 PGK2P07205 417 aa8.73□□□□□ -1.01
CDC27-201ENST00000066544 RXRBP28702 533 aa8.73□□□□□ -1.01
CDC27-201ENST00000066544 CLNS1AP54105 237 aaKnown RBP8.73□□□□□ -1.01
CDC27-201ENST00000066544 PTPN20Q4JDL3 420 aa8.73□□□□□ -1.01
CDC27-201ENST00000066544 MSS51Q4VC12 460 aa8.73□□□□□ -1.01
CDC27-201ENST00000066544 FAXCQ5TGI0 409 aa8.73□□□□□ -1.01
CDC27-201ENST00000066544 EEF1DP3Q658K8 133 aa8.73□□□□□ -1.01
CDC27-201ENST00000066544 REPS2Q8NFH8 660 aa8.73□□□□□ -1.01
CDC27-201ENST00000066544 LRRC8CQ8TDW0 803 aa8.73□□□□□ -1.01
CDC27-201ENST00000066544 PYROXD1Q8WU10 500 aa8.73□□□□□ -1.01
CDC27-201ENST00000066544 TMEM174Q8WUU8 243 aa8.73□□□□□ -1.01
CDC27-201ENST00000066544 NSMCE1Q8WV22 266 aa8.73□□□□□ -1.01
CDC27-201ENST00000066544 AS3MTQ9HBK9 375 aa8.73□□□□□ -1.01
CDC27-201ENST00000066544 PIM2Q9P1W9 311 aa8.73□□□□□ -1.01
CDC27-201ENST00000066544 PHTF1Q9UMS5 762 aa8.73□□□□□ -1.01
CDC27-201ENST00000066544 CHMP2BQ9UQN3 213 aa8.73□□□□□ -1.01
CDC27-201ENST00000066544 SPDYE16A6NNV3 312 aaPredicted RBP8.72□□□□□ -1.01
CDC27-201ENST00000066544 H0Y3Z8 333 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 STAM2O75886 525 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 ASS1P00966 412 aaKnown RBP8.72□□□□□ -1.01
CDC27-201ENST00000066544 KRT3P12035 628 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 TCF7P36402 384 aaPredicted RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms