RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 ANXA9O76027 345 aa24.2■■□□□ 1.46
TARBP1-201ENST00000040877 SNRPAP09012 282 aaKnown RBP24.2■■□□□ 1.46
TARBP1-201ENST00000040877 ALDH7A1P49419 539 aaKnown RBP24.2■■□□□ 1.46
TARBP1-201ENST00000040877 PTK6Q13882 451 aa24.2■■□□□ 1.46
TARBP1-201ENST00000040877 ZBTB41Q5SVQ8 909 aa24.2■■□□□ 1.46
TARBP1-201ENST00000040877 C1orf131Q8NDD1 294 aaKnown RBP24.2■■□□□ 1.46
TARBP1-201ENST00000040877 USP33Q8TEY7 942 aa24.2■■□□□ 1.46
TARBP1-201ENST00000040877 FAM163AQ96GL9 167 aaPredicted RBP24.2■■□□□ 1.46
TARBP1-201ENST00000040877 OLFML3Q9NRN5 406 aa24.2■■□□□ 1.46
TARBP1-201ENST00000040877 VPS9D1Q9Y2B5 631 aa24.2■■□□□ 1.46
TARBP1-201ENST00000040877 VWDEQ8N2E2 1590 aa24.2■■□□□ 1.46
TARBP1-201ENST00000040877 MCF2P10911 925 aa24.2■■□□□ 1.46
TARBP1-201ENST00000040877 ARHGAP15Q53QZ3 475 aa24.2■■□□□ 1.46
TARBP1-201ENST00000040877 ATXN7L3BQ96GX2 97 aa24.2■■□□□ 1.46
TARBP1-201ENST00000040877 C9orf72Q96LT7 481 aa24.2■■□□□ 1.46
TARBP1-201ENST00000040877 GOLPH3Q9H4A6 298 aa24.2■■□□□ 1.46
TARBP1-201ENST00000040877 AGO4Q9HCK5 861 aaKnown RBP24.2■■□□□ 1.46
TARBP1-201ENST00000040877 FDFT1P37268 417 aa24.19■■□□□ 1.46
TARBP1-201ENST00000040877 THPOP40225 353 aa24.19■■□□□ 1.46
TARBP1-201ENST00000040877 MAGEA4P43358 317 aa24.19■■□□□ 1.46
TARBP1-201ENST00000040877 CASP7P55210 303 aa24.19■■□□□ 1.46
TARBP1-201ENST00000040877 NIPA1Q7RTP0 329 aa24.19■■□□□ 1.46
TARBP1-201ENST00000040877 ING2Q9H160 280 aa24.19■■□□□ 1.46
TARBP1-201ENST00000040877 DSEQ9UL01 958 aa24.19■■□□□ 1.46
TARBP1-201ENST00000040877 RNF103-CHMP3A0A140T963 221 aa24.19■■□□□ 1.46
TARBP1-201ENST00000040877 FAM47DPA6NHR8 397 aa24.19■■□□□ 1.46
TARBP1-201ENST00000040877 ATICP31939 592 aa24.19■■□□□ 1.46
TARBP1-201ENST00000040877 STX3Q13277 289 aa24.19■■□□□ 1.46
TARBP1-201ENST00000040877 MTFR1Q15390 333 aa24.19■■□□□ 1.46
TARBP1-201ENST00000040877 FKBP1CQ5VVH2 108 aa24.19■■□□□ 1.46
TARBP1-201ENST00000040877 PRUNE1Q86TP1 453 aa24.19■■□□□ 1.46
TARBP1-201ENST00000040877 USP13Q92995 863 aaPredicted RBP24.19■■□□□ 1.46
TARBP1-201ENST00000040877 FAM161BQ96MY7 647 aa24.19■■□□□ 1.46
TARBP1-201ENST00000040877 CYP3A43Q9HB55 503 aa24.19■■□□□ 1.46
TARBP1-201ENST00000040877 ARRDC4Q8NCT1 418 aa24.19■■□□□ 1.46
TARBP1-201ENST00000040877 TPCN2Q8NHX9 752 aa24.19■■□□□ 1.46
TARBP1-201ENST00000040877 RANBP17Q9H2T7 1088 aaKnown RBP24.19■■□□□ 1.46
TARBP1-201ENST00000040877 KLK7P49862 253 aa24.19■■□□□ 1.46
TARBP1-201ENST00000040877 ANKS3Q6ZW76 656 aa24.19■■□□□ 1.46
TARBP1-201ENST00000040877 TMEM169Q96HH4 297 aa24.19■■□□□ 1.46
TARBP1-201ENST00000040877 TSC22D3Q99576 134 aa24.19■■□□□ 1.46
TARBP1-201ENST00000040877 ZSWIM1Q9BR11 485 aa24.19■■□□□ 1.46
TARBP1-201ENST00000040877 GTPBP10A4D1E9 387 aaKnown RBP24.18■■□□□ 1.46
TARBP1-201ENST00000040877 RAD51CO43502 376 aa24.18■■□□□ 1.46
TARBP1-201ENST00000040877 TOB1P50616 345 aaPredicted RBP24.18■■□□□ 1.46
TARBP1-201ENST00000040877 BFSP2Q13515 415 aa24.18■■□□□ 1.46
TARBP1-201ENST00000040877 NTRK3Q16288 839 aa24.18■■□□□ 1.46
TARBP1-201ENST00000040877 C10orf120Q5SQS8 335 aa24.18■■□□□ 1.46
TARBP1-201ENST00000040877 CENPPQ6IPU0 288 aa24.18■■□□□ 1.46
TARBP1-201ENST00000040877 TTI2Q6NXR4 508 aa24.18■■□□□ 1.46
TARBP1-201ENST00000040877 TRIM10Q9UDY6 481 aa24.18■■□□□ 1.46
TARBP1-201ENST00000040877 SALL3Q9BXA9 1300 aa24.18■■□□□ 1.46
TARBP1-201ENST00000040877 ZNF263O14978 683 aa24.18■■□□□ 1.46
TARBP1-201ENST00000040877 ATXN8OSP0DMR3 200 aa24.18■■□□□ 1.46
TARBP1-201ENST00000040877 ANO5Q75V66 913 aa24.18■■□□□ 1.46
TARBP1-201ENST00000040877 ZNF720Q7Z2F6 126 aa24.18■■□□□ 1.46
TARBP1-201ENST00000040877 KDELC2Q7Z4H8 507 aa24.18■■□□□ 1.46
TARBP1-201ENST00000040877 SLC13A5Q86YT5 568 aaPredicted RBP24.18■■□□□ 1.46
TARBP1-201ENST00000040877 CBWD2Q8IUF1 395 aa24.18■■□□□ 1.46
TARBP1-201ENST00000040877 WDR49Q8IV35 697 aa24.18■■□□□ 1.46
TARBP1-201ENST00000040877 IDI2Q9BXS1 227 aa24.18■■□□□ 1.46
TARBP1-201ENST00000040877 DEPDC5O75140 1603 aa24.18■■□□□ 1.46
TARBP1-201ENST00000040877 KRT4P19013 534 aa24.18■■□□□ 1.46
TARBP1-201ENST00000040877 AKT1P31749 480 aa24.18■■□□□ 1.46
TARBP1-201ENST00000040877 DSG3P32926 999 aa24.18■■□□□ 1.46
TARBP1-201ENST00000040877 COILP38432 576 aaPredicted RBP24.18■■□□□ 1.46
TARBP1-201ENST00000040877 EIF2AQ9BY44 585 aaKnown RBP24.18■■□□□ 1.46
TARBP1-201ENST00000040877 ASMTLO95671 621 aa24.18■■□□□ 1.46
TARBP1-201ENST00000040877 ARHGAP23Q9P227 1491 aa24.18■■□□□ 1.46
TARBP1-201ENST00000040877 PDK2Q15119 407 aa24.17■■□□□ 1.46
TARBP1-201ENST00000040877 ECT2Q9H8V3 914 aa24.17■■□□□ 1.46
TARBP1-201ENST00000040877 RSPH10B2B2RC85 870 aa24.17■■□□□ 1.46
TARBP1-201ENST00000040877 EGFRP00533 1210 aa24.17■■□□□ 1.46
TARBP1-201ENST00000040877 RSPH10BP0C881 870 aa24.17■■□□□ 1.46
TARBP1-201ENST00000040877 PTGER2P43116 358 aa24.17■■□□□ 1.46
TARBP1-201ENST00000040877 SLC11A2P49281 568 aa24.17■■□□□ 1.46
TARBP1-201ENST00000040877 PTK7Q13308 1070 aa24.17■■□□□ 1.46
TARBP1-201ENST00000040877 SKIV2LQ15477 1246 aaKnown RBP24.17■■□□□ 1.46
TARBP1-201ENST00000040877 CXorf38Q8TB03 319 aa24.17■■□□□ 1.46
TARBP1-201ENST00000040877 ELMO2Q96JJ3 720 aa24.17■■□□□ 1.46
TARBP1-201ENST00000040877 LSM8O95777 96 aaKnown RBP24.17■■□□□ 1.46
TARBP1-201ENST00000040877 KRT16P08779 473 aa24.17■■□□□ 1.46
TARBP1-201ENST00000040877 SHMT1P34896 483 aa24.17■■□□□ 1.46
TARBP1-201ENST00000040877 CLCN3P51790 818 aa24.17■■□□□ 1.46
TARBP1-201ENST00000040877 DEFB132Q7Z7B7 95 aa24.17■■□□□ 1.46
TARBP1-201ENST00000040877 CCNJLQ8IV13 435 aa24.17■■□□□ 1.46
TARBP1-201ENST00000040877 SPATC1LQ9H0A9 340 aa24.17■■□□□ 1.46
TARBP1-201ENST00000040877 CHMP2BQ9UQN3 213 aa24.17■■□□□ 1.46
TARBP1-201ENST00000040877 ANGPT2O15123 496 aa24.17■■□□□ 1.46
TARBP1-201ENST00000040877 ATMINO43313 823 aaPredicted RBP24.17■■□□□ 1.46
TARBP1-201ENST00000040877 NBPF12Q5TAG4 269 aaPredicted RBP24.17■■□□□ 1.46
TARBP1-201ENST00000040877 MEI1Q5TIA1 1274 aa24.17■■□□□ 1.46
TARBP1-201ENST00000040877 EFL1Q7Z2Z2 1120 aaKnown RBP24.17■■□□□ 1.46
TARBP1-201ENST00000040877 C20orf96Q9NUD7 363 aaPredicted RBP24.17■■□□□ 1.46
TARBP1-201ENST00000040877 FBXO21O94952 628 aa24.16■■□□□ 1.46
TARBP1-201ENST00000040877 ADGRA1Q86SQ6 560 aa24.16■■□□□ 1.46
TARBP1-201ENST00000040877 TFB1MQ8WVM0 346 aaKnown RBP24.16■■□□□ 1.46
TARBP1-201ENST00000040877 SLC24A3Q9HC58 644 aa24.16■■□□□ 1.46
TARBP1-201ENST00000040877 GPRC5CQ9NQ84 441 aa24.16■■□□□ 1.46
TARBP1-201ENST00000040877 STAU2Q9NUL3 570 aaKnown RBP eCLIP24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms