RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 NAGPAQ9UK23 515 aa23.45■■□□□ 1.34
HOXC8-201ENST00000040584 LRFN2Q9ULH4 789 aa23.45■■□□□ 1.34
HOXC8-201ENST00000040584 KPNA7A9QM74 516 aa23.44■■□□□ 1.34
HOXC8-201ENST00000040584 PODXLO00592 558 aa23.44■■□□□ 1.34
HOXC8-201ENST00000040584 TNFAIP3P21580 790 aa23.44■■□□□ 1.34
HOXC8-201ENST00000040584 PDE6CP51160 858 aa23.44■■□□□ 1.34
HOXC8-201ENST00000040584 ZNF132P52740 706 aa23.44■■□□□ 1.34
HOXC8-201ENST00000040584 YWHAEP62258 255 aaKnown RBP23.44■■□□□ 1.34
HOXC8-201ENST00000040584 IKBKEQ14164 716 aa23.44■■□□□ 1.34
HOXC8-201ENST00000040584 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.44■■□□□ 1.34
HOXC8-201ENST00000040584 RPUSD2Q8IZ73 545 aaKnown RBP23.44■■□□□ 1.34
HOXC8-201ENST00000040584 CAPZA3Q96KX2 299 aa23.44■■□□□ 1.34
HOXC8-201ENST00000040584 SEPT11Q9NVA2 429 aaKnown RBP23.44■■□□□ 1.34
HOXC8-201ENST00000040584 TDRD15B5MCY1 1934 aaKnown RBP23.43■■□□□ 1.34
HOXC8-201ENST00000040584 CHRNB2P17787 502 aa23.43■■□□□ 1.34
HOXC8-201ENST00000040584 PAFAH1B1P43034 410 aa23.43■■□□□ 1.34
HOXC8-201ENST00000040584 SV2CQ496J9 727 aa23.43■■□□□ 1.34
HOXC8-201ENST00000040584 C10orf76Q5T2E6 689 aa23.43■■□□□ 1.34
HOXC8-201ENST00000040584 MFSD5Q6N075 450 aa23.43■■□□□ 1.34
HOXC8-201ENST00000040584 CREG2Q8IUH2 290 aa23.43■■□□□ 1.34
HOXC8-201ENST00000040584 DDX1Q92499 740 aaKnown RBP23.43■■□□□ 1.34
HOXC8-201ENST00000040584 TTC3P53804 2025 aa23.43■■□□□ 1.34
HOXC8-201ENST00000040584 H3BQF6 201 aa23.43■■□□□ 1.34
HOXC8-201ENST00000040584 MMEP08473 750 aa23.43■■□□□ 1.34
HOXC8-201ENST00000040584 AARSP49588 968 aaKnown RBP eCLIP23.43■■□□□ 1.34
HOXC8-201ENST00000040584 GATMP50440 423 aa23.43■■□□□ 1.34
HOXC8-201ENST00000040584 BPIFB4P59827 614 aa23.43■■□□□ 1.34
HOXC8-201ENST00000040584 TUSC3Q13454 348 aa23.43■■□□□ 1.34
HOXC8-201ENST00000040584 UPP1Q16831 310 aa23.43■■□□□ 1.34
HOXC8-201ENST00000040584 ALKBH5Q6P6C2 394 aaKnown RBP23.43■■□□□ 1.34
HOXC8-201ENST00000040584 CRIPAKQ8N1N5 446 aa23.43■■□□□ 1.34
HOXC8-201ENST00000040584 URGCPQ8TCY9 931 aa23.43■■□□□ 1.34
HOXC8-201ENST00000040584 GDAP2Q9NXN4 497 aa23.43■■□□□ 1.34
HOXC8-201ENST00000040584 HMGXB4Q9UGU5 601 aa23.43■■□□□ 1.34
HOXC8-201ENST00000040584 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.43■■□□□ 1.34
HOXC8-201ENST00000040584 RPL9P32969 192 aaKnown RBP23.42■■□□□ 1.34
HOXC8-201ENST00000040584 ORC1Q13415 861 aa23.42■■□□□ 1.34
HOXC8-201ENST00000040584 SOWAHAQ2M3V2 549 aa23.42■■□□□ 1.34
HOXC8-201ENST00000040584 CCNI2Q6ZMN8 369 aaPredicted RBP23.42■■□□□ 1.34
HOXC8-201ENST00000040584 PALB2Q86YC2 1186 aa23.42■■□□□ 1.34
HOXC8-201ENST00000040584 ZNF280BQ86YH2 543 aa23.42■■□□□ 1.34
HOXC8-201ENST00000040584 ABI1Q8IZP0 508 aa23.42■■□□□ 1.34
HOXC8-201ENST00000040584 TMEM199Q8N511 208 aa23.42■■□□□ 1.34
HOXC8-201ENST00000040584 C3orf58Q8NDZ4 430 aa23.42■■□□□ 1.34
HOXC8-201ENST00000040584 MRPL45Q9BRJ2 306 aaKnown RBP23.42■■□□□ 1.34
HOXC8-201ENST00000040584 FAM170AA1A519 330 aa23.41■■□□□ 1.34
HOXC8-201ENST00000040584 B4GALT3O60512 393 aa23.41■■□□□ 1.34
HOXC8-201ENST00000040584 CILPO75339 1184 aa23.41■■□□□ 1.34
HOXC8-201ENST00000040584 DDHD2O94830 711 aa23.41■■□□□ 1.34
HOXC8-201ENST00000040584 MOCS3O95396 460 aa23.41■■□□□ 1.34
HOXC8-201ENST00000040584 GNA15P30679 374 aa23.41■■□□□ 1.34
HOXC8-201ENST00000040584 FMO1Q01740 532 aa23.41■■□□□ 1.34
HOXC8-201ENST00000040584 CDR2Q01850 454 aa23.41■■□□□ 1.34
HOXC8-201ENST00000040584 GLE1Q53GS7 698 aaKnown RBP23.41■■□□□ 1.34
HOXC8-201ENST00000040584 DNAAF5Q86Y56 855 aa23.41■■□□□ 1.34
HOXC8-201ENST00000040584 WHAMMQ8TF30 809 aa23.41■■□□□ 1.34
HOXC8-201ENST00000040584 TWNKQ96RR1 684 aa23.41■■□□□ 1.34
HOXC8-201ENST00000040584 OSBPL9Q96SU4 736 aa23.41■■□□□ 1.34
HOXC8-201ENST00000040584 TBC1D13Q9NVG8 400 aa23.41■■□□□ 1.34
HOXC8-201ENST00000040584 MICAL3Q7RTP6 2002 aa23.41■■□□□ 1.34
HOXC8-201ENST00000040584 ACRP10323 421 aa23.41■■□□□ 1.34
HOXC8-201ENST00000040584 CASD1Q96PB1 797 aa23.41■■□□□ 1.34
HOXC8-201ENST00000040584 PCDHB18PQ96TA0 734 aa23.41■■□□□ 1.34
HOXC8-201ENST00000040584 KANSL3Q9P2N6 904 aa23.41■■□□□ 1.34
HOXC8-201ENST00000040584 RAD23BP54727 409 aa23.4■■□□□ 1.34
HOXC8-201ENST00000040584 RNASELQ05823 741 aaKnown RBP23.4■■□□□ 1.34
HOXC8-201ENST00000040584 INCA1Q0VD86 236 aa23.4■■□□□ 1.34
HOXC8-201ENST00000040584 CCDC181Q5TID7 509 aa23.4■■□□□ 1.34
HOXC8-201ENST00000040584 NPAS4Q8IUM7 802 aa23.4■■□□□ 1.34
HOXC8-201ENST00000040584 COG1Q8WTW3 980 aa23.4■■□□□ 1.34
HOXC8-201ENST00000040584 DDX27Q96GQ7 796 aaKnown RBP23.4■■□□□ 1.34
HOXC8-201ENST00000040584 ELOVL4Q9GZR5 314 aa23.4■■□□□ 1.34
HOXC8-201ENST00000040584 FAM124BQ9H5Z6 455 aaPredicted RBP23.4■■□□□ 1.34
HOXC8-201ENST00000040584 BARX2Q9UMQ3 279 aaPredicted RBP23.4■■□□□ 1.34
HOXC8-201ENST00000040584 CAPN6Q9Y6Q1 641 aa23.4■■□□□ 1.34
HOXC8-201ENST00000040584 ALPK3Q96L96 1907 aa23.39■■□□□ 1.34
HOXC8-201ENST00000040584 TMCO5BA8MYB1 307 aa23.39■■□□□ 1.34
HOXC8-201ENST00000040584 THAP12O43422 761 aa23.39■■□□□ 1.34
HOXC8-201ENST00000040584 B3GAT3O94766 335 aa23.39■■□□□ 1.34
HOXC8-201ENST00000040584 UPP2O95045 317 aa23.39■■□□□ 1.34
HOXC8-201ENST00000040584 SSTR3P32745 418 aaPredicted RBP23.39■■□□□ 1.34
HOXC8-201ENST00000040584 NDST1P52848 882 aa23.39■■□□□ 1.34
HOXC8-201ENST00000040584 PAN2Q504Q3 1202 aaKnown RBP23.39■■□□□ 1.34
HOXC8-201ENST00000040584 ZNF677Q86XU0 584 aa23.39■■□□□ 1.34
HOXC8-201ENST00000040584 TAS2R14Q9NYV8 317 aa23.39■■□□□ 1.34
HOXC8-201ENST00000040584 VPS18Q9P253 973 aa23.39■■□□□ 1.34
HOXC8-201ENST00000040584 ATP8B3O60423 1300 aa23.39■■□□□ 1.33
HOXC8-201ENST00000040584 ERICH4A6NGS2 130 aa23.39■■□□□ 1.33
HOXC8-201ENST00000040584 PDE2AO00408 941 aaPredicted RBP23.39■■□□□ 1.33
HOXC8-201ENST00000040584 CYB561D2O14569 222 aa23.39■■□□□ 1.33
HOXC8-201ENST00000040584 HUS1O60921 280 aa23.39■■□□□ 1.33
HOXC8-201ENST00000040584 DSC1Q08554 894 aa23.39■■□□□ 1.33
HOXC8-201ENST00000040584 GOLGA6L1Q8N7Z2 621 aa23.39■■□□□ 1.33
HOXC8-201ENST00000040584 SLC4A11Q8NBS3 891 aa23.39■■□□□ 1.33
HOXC8-201ENST00000040584 APPL2Q8NEU8 664 aa23.39■■□□□ 1.33
HOXC8-201ENST00000040584 ZNF606Q8WXB4 792 aa23.39■■□□□ 1.33
HOXC8-201ENST00000040584 UROC1Q96N76 676 aa23.39■■□□□ 1.33
HOXC8-201ENST00000040584 PACSIN1Q9BY11 444 aa23.39■■□□□ 1.33
HOXC8-201ENST00000040584 PRKAG2Q9UGJ0 569 aa23.39■■□□□ 1.33
HOXC8-201ENST00000040584 NME7Q9Y5B8 376 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms