RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 CDCA2Q69YH5 1023 aaPredicted RBP14.78□□□□□ -0.04
USH1C-201ENST00000005226 USP37Q86T82 979 aa14.78□□□□□ -0.04
USH1C-201ENST00000005226 RCOR2Q8IZ40 523 aa14.78□□□□□ -0.04
USH1C-201ENST00000005226 ZNF606Q8WXB4 792 aa14.78□□□□□ -0.04
USH1C-201ENST00000005226 PDCD2LQ9BRP1 358 aa14.78□□□□□ -0.04
USH1C-201ENST00000005226 WDR83Q9BRX9 315 aaKnown RBP14.78□□□□□ -0.04
USH1C-201ENST00000005226 NTPCRQ9BSD7 190 aaKnown RBP14.78□□□□□ -0.04
USH1C-201ENST00000005226 ZWILCHQ9H900 591 aa14.78□□□□□ -0.04
USH1C-201ENST00000005226 CYLDQ9NQC7 956 aa14.78□□□□□ -0.04
USH1C-201ENST00000005226 FBXO6Q9NRD1 293 aaPredicted RBP14.78□□□□□ -0.04
USH1C-201ENST00000005226 RABGEF1Q9UJ41 708 aa14.78□□□□□ -0.04
USH1C-201ENST00000005226 SMG5Q9UPR3 1016 aaKnown RBP14.78□□□□□ -0.04
USH1C-201ENST00000005226 LRRC42Q9Y546 428 aa14.78□□□□□ -0.04
USH1C-201ENST00000005226 ZBED4O75132 1171 aa14.78□□□□□ -0.04
USH1C-201ENST00000005226 TJP3O95049 919 aa14.78□□□□□ -0.04
USH1C-201ENST00000005226 BRD2P25440 801 aaKnown RBP14.78□□□□□ -0.04
USH1C-201ENST00000005226 BPIFB4P59827 614 aa14.78□□□□□ -0.04
USH1C-201ENST00000005226 MCCD1P59942 119 aaPredicted RBP14.78□□□□□ -0.04
USH1C-201ENST00000005226 SEPT7Q16181 437 aaKnown RBP14.78□□□□□ -0.04
USH1C-201ENST00000005226 C3orf62Q6ZUJ4 267 aa14.78□□□□□ -0.04
USH1C-201ENST00000005226 CENPUQ71F23 418 aa14.78□□□□□ -0.04
USH1C-201ENST00000005226 NIPA1Q7RTP0 329 aa14.78□□□□□ -0.04
USH1C-201ENST00000005226 ZNF677Q86XU0 584 aa14.78□□□□□ -0.04
USH1C-201ENST00000005226 SAMD3Q8N6K7 520 aa14.78□□□□□ -0.04
USH1C-201ENST00000005226 MOV10L1Q9BXT6 1211 aaKnown RBP14.78□□□□□ -0.04
USH1C-201ENST00000005226 PARVAQ9NVD7 372 aa14.78□□□□□ -0.04
USH1C-201ENST00000005226 HEY2Q9UBP5 337 aa14.78□□□□□ -0.04
USH1C-201ENST00000005226 RIPK3Q9Y572 518 aa14.78□□□□□ -0.04
USH1C-201ENST00000005226 TMEM191CA6NGB0 347 aa14.77□□□□□ -0.04
USH1C-201ENST00000005226 SPDYE5A6NIY4 337 aa14.77□□□□□ -0.04
USH1C-201ENST00000005226 EXTL3O43909 919 aa14.77□□□□□ -0.04
USH1C-201ENST00000005226 ATP5HO75947 161 aa14.77□□□□□ -0.04
USH1C-201ENST00000005226 STBD1O95210 358 aa14.77□□□□□ -0.04
USH1C-201ENST00000005226 CST3P01034 146 aaPredicted RBP14.77□□□□□ -0.04
USH1C-201ENST00000005226 TMEM191BP0C7N4 346 aa14.77□□□□□ -0.04
USH1C-201ENST00000005226 GRIK3Q13003 919 aa14.77□□□□□ -0.04
USH1C-201ENST00000005226 DCUN1D2Q6PH85 259 aa14.77□□□□□ -0.04
USH1C-201ENST00000005226 CLNKQ7Z7G1 428 aa14.77□□□□□ -0.04
USH1C-201ENST00000005226 RHPN2Q8IUC4 686 aa14.77□□□□□ -0.04
USH1C-201ENST00000005226 CADM1Q9BY67 442 aaKnown RBP14.77□□□□□ -0.04
USH1C-201ENST00000005226 ZFATQ9P243 1243 aa14.77□□□□□ -0.04
USH1C-201ENST00000005226 PSMC3IPQ9P2W1 217 aaPredicted RBP14.77□□□□□ -0.04
USH1C-201ENST00000005226 TJP2Q9UDY2 1190 aa14.77□□□□□ -0.04
USH1C-201ENST00000005226 AGO2Q9UKV8 859 aaKnown RBP14.77□□□□□ -0.04
USH1C-201ENST00000005226 SYNPO2Q9UMS6 1093 aa14.77□□□□□ -0.04
USH1C-201ENST00000005226 PCDHA10Q9Y5I2 948 aa14.77□□□□□ -0.04
USH1C-201ENST00000005226 A6NHS1 94 aa14.77□□□□□ -0.05
USH1C-201ENST00000005226 POTEJP0CG39 1038 aa14.77□□□□□ -0.05
USH1C-201ENST00000005226 CETN2P41208 172 aa14.77□□□□□ -0.05
USH1C-201ENST00000005226 CTCFP49711 727 aaPredicted RBP14.77□□□□□ -0.05
USH1C-201ENST00000005226 JAK3P52333 1124 aa14.77□□□□□ -0.05
USH1C-201ENST00000005226 VCPP55072 806 aaKnown RBP14.77□□□□□ -0.05
USH1C-201ENST00000005226 BAATQ14032 418 aaPredicted RBP14.77□□□□□ -0.05
USH1C-201ENST00000005226 OASLQ15646 514 aaKnown RBP14.77□□□□□ -0.05
USH1C-201ENST00000005226 CCDC142Q17RM4 750 aa14.77□□□□□ -0.05
USH1C-201ENST00000005226 CTC1Q2NKJ3 1217 aa14.77□□□□□ -0.05
USH1C-201ENST00000005226 BBS9Q3SYG4 887 aa14.77□□□□□ -0.05
USH1C-201ENST00000005226 MEX3CQ5U5Q3 659 aaKnown RBP14.77□□□□□ -0.05
USH1C-201ENST00000005226 PHF13Q86YI8 300 aaPredicted RBP14.77□□□□□ -0.05
USH1C-201ENST00000005226 TDRPQ86YL5 185 aa14.77□□□□□ -0.05
USH1C-201ENST00000005226 DTX3LQ8TDB6 740 aa14.77□□□□□ -0.05
USH1C-201ENST00000005226 PYROXD1Q8WU10 500 aa14.77□□□□□ -0.05
USH1C-201ENST00000005226 INPP5DQ92835 1189 aa14.77□□□□□ -0.05
USH1C-201ENST00000005226 TTC25Q96NG3 672 aa14.77□□□□□ -0.05
USH1C-201ENST00000005226 TIPINQ9BVW5 301 aa14.77□□□□□ -0.05
USH1C-201ENST00000005226 TARS2Q9BW92 718 aaKnown RBP14.77□□□□□ -0.05
USH1C-201ENST00000005226 IP6K2Q9UHH9 426 aa14.77□□□□□ -0.05
USH1C-201ENST00000005226 CORO1CQ9ULV4 474 aaPredicted RBP14.77□□□□□ -0.05
USH1C-201ENST00000005226 hCG_1818297A0A087WSY0 165 aa14.76□□□□□ -0.05
USH1C-201ENST00000005226 ITGBL1O95965 494 aaPredicted RBP14.76□□□□□ -0.05
USH1C-201ENST00000005226 EDN1P05305 212 aa14.76□□□□□ -0.05
USH1C-201ENST00000005226 GARTP22102 1010 aa14.76□□□□□ -0.05
USH1C-201ENST00000005226 GEMIN4P57678 1058 aaKnown RBP14.76□□□□□ -0.05
USH1C-201ENST00000005226 LMNB2Q03252 620 aa14.76□□□□□ -0.05
USH1C-201ENST00000005226 PSMD6Q15008 389 aa14.76□□□□□ -0.05
USH1C-201ENST00000005226 HIF1AQ16665 826 aa14.76□□□□□ -0.05
USH1C-201ENST00000005226 MCF2L2Q86YR7 1114 aa14.76□□□□□ -0.05
USH1C-201ENST00000005226 ZNF276Q8N554 614 aa14.76□□□□□ -0.05
USH1C-201ENST00000005226 PAFAH2Q99487 392 aa14.76□□□□□ -0.05
USH1C-201ENST00000005226 DEFB129Q9H1M3 183 aa14.76□□□□□ -0.05
USH1C-201ENST00000005226 PXMP2Q9NR77 195 aa14.76□□□□□ -0.05
USH1C-201ENST00000005226 RBAKQ9NYW8 714 aaPredicted RBP14.76□□□□□ -0.05
USH1C-201ENST00000005226 H0YIN7 160 aa14.76□□□□□ -0.05
USH1C-201ENST00000005226 ZC3H11AO75152 810 aaKnown RBP eCLIP14.76□□□□□ -0.05
USH1C-201ENST00000005226 PTPN4P29074 926 aa14.76□□□□□ -0.05
USH1C-201ENST00000005226 KRT76Q01546 638 aa14.76□□□□□ -0.05
USH1C-201ENST00000005226 MORF4L2Q15014 288 aa14.76□□□□□ -0.05
USH1C-201ENST00000005226 RGS9BPQ6ZS82 235 aa14.76□□□□□ -0.05
USH1C-201ENST00000005226 TTC7BQ86TV6 843 aa14.76□□□□□ -0.05
USH1C-201ENST00000005226 CCDC60Q8IWA6 550 aaPredicted RBP14.76□□□□□ -0.05
USH1C-201ENST00000005226 FBXO36Q8NEA4 188 aa14.76□□□□□ -0.05
USH1C-201ENST00000005226 ASAP3Q8TDY4 903 aa14.76□□□□□ -0.05
USH1C-201ENST00000005226 RBM41Q96IZ5 413 aaKnown RBP14.76□□□□□ -0.05
USH1C-201ENST00000005226 SCINQ9Y6U3 715 aa14.76□□□□□ -0.05
USH1C-201ENST00000005226 COL11A2P13942 1736 aaPredicted RBP14.76□□□□□ -0.05
USH1C-201ENST00000005226 THSD7AQ9UPZ6 1657 aa14.76□□□□□ -0.05
USH1C-201ENST00000005226 TTLL13PA6NNM8 815 aa14.75□□□□□ -0.05
USH1C-201ENST00000005226 PLA2G6O60733 806 aa14.75□□□□□ -0.05
USH1C-201ENST00000005226 KRT36O76013 467 aa14.75□□□□□ -0.05
USH1C-201ENST00000005226 CD48P09326 243 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms