RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Ppp1r36D3Z0R2 411 aa12.15□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Zc3h7aE9PWW6 970 aaKnown RBP12.15□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Tnfrsf18O35714 228 aa12.15□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Birc5O70201 140 aa12.15□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Hsd17b2P51658 381 aa12.15□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Tarbp2P97473 365 aa12.15□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Nsun2Q1HFZ0 757 aaKnown RBP12.15□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Nt5dc3Q3UHB1 546 aa12.15□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Ugt3a1Q3UP75 523 aa12.15□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Gm29609Q3UU56 907 aa12.15□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Mks1Q5SW45 561 aa12.15□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Slc9c1Q6UJY2 1175 aa12.15□□□□□ -0.46
Col9a1-202ENSMUST00000088349 AmphQ7TQF7 686 aa12.15□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Crybg3Q80W49 1005 aa12.15□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Dupd1Q8BK84 215 aa12.15□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Gtf3c2Q8BL74 907 aa12.15□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Pak4Q8BTW9 593 aa12.15□□□□□ -0.46
Col9a1-202ENSMUST00000088349 RnpepQ8VCT3 650 aaKnown RBP12.15□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Arl8bQ9CQW2 186 aa12.15□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Rex1bdQ9CYZ6 169 aa12.15□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Ankef1Q9D2J7 775 aa12.15□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Abcb11Q9QY30 1321 aa12.15□□□□□ -0.46
Col9a1-202ENSMUST00000088349 PtproE9Q612 1226 aa12.15□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Pdcd2P46718 343 aa12.15□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Kpnb1P70168 876 aaKnown RBP12.15□□□□□ -0.46
Col9a1-202ENSMUST00000088349 FerP70451 823 aa12.15□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Serping1P97290 504 aa12.15□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Mark3Q03141 753 aa12.15□□□□□ -0.46
Col9a1-202ENSMUST00000088349 GmpsQ3THK7 693 aa12.15□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Cyp2j11Q3UNV2 504 aa12.15□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Luc7l3Q5SUF2 432 aaKnown RBP12.15□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Gpatch2lQ6PE65 482 aa12.15□□□□□ -0.46
Col9a1-202ENSMUST00000088349 SrlQ7TQ48 910 aa12.15□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Rtp1Q8C8C1 263 aa12.15□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Ccdc80Q8R2G6 949 aa12.15□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Cables1Q9ESJ1 568 aa12.15□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Kifc1Q9QWT9 674 aa12.15□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Plod1Q9R0E2 728 aa12.15□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Tcp11x2A2AEI7 503 aa12.14□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Lipo2D3YY49 398 aa12.14□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Gm3460E9QAI8 215 aa12.14□□□□□ -0.47
Col9a1-202ENSMUST00000088349 NumblO08919 604 aa12.14□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Cd70O55237 195 aa12.14□□□□□ -0.47
Col9a1-202ENSMUST00000088349 PrkceP16054 737 aa12.14□□□□□ -0.47
Col9a1-202ENSMUST00000088349 BtkP35991 659 aa12.14□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Lipo3Q3UT41 399 aa12.14□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Oog3Q3UWY1 500 aa12.14□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Gm11437Q5QR91 290 aa12.14□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Foxd4Q60688 444 aa12.14□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Capn3Q64691 821 aa12.14□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Kif11Q6P9P6 1052 aa12.14□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Sugp1Q8CH02 643 aaKnown RBP12.14□□□□□ -0.47
Col9a1-202ENSMUST00000088349 DolkQ8R2Y3 534 aa12.14□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Snap47Q8R570 413 aa12.14□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Cyp39a1Q9JKJ9 470 aa12.14□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Gabbr1Q9WV18 960 aa12.14□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Zscan4-ps1A0A1C7CYV3 506 aa12.14□□□□□ -0.47
Col9a1-202ENSMUST00000088349 MipepA6H611 711 aa12.14□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Zscan4dA7KBS4 506 aa12.14□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Srpk1O70551 648 aaKnown RBP12.14□□□□□ -0.47
Col9a1-202ENSMUST00000088349 PrkchP23298 683 aa12.14□□□□□ -0.47
Col9a1-202ENSMUST00000088349 VcpQ01853 806 aaKnown RBP12.14□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Grb7Q03160 535 aa12.14□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Trim72Q1XH17 477 aa12.14□□□□□ -0.47
Col9a1-202ENSMUST00000088349 9130409I23RikQ3TS87 320 aa12.14□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Slc17a7Q3TXX4 560 aa12.14□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Zscan4fQ3URS2 506 aa12.14□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Garnl3Q3V0G7 1038 aa12.14□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Trpm4Q7TN37 1213 aa12.14□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Zscan4cQ80VJ6 506 aa12.14□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Rell1Q8K2J7 272 aa12.14□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Cttnbp2nlQ99LJ0 638 aa12.14□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Anxa8O35640 327 aa12.14□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Fcer2P20693 331 aa12.14□□□□□ -0.47
Col9a1-202ENSMUST00000088349 RarbP22605 482 aa12.14□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Gja8P28236 440 aa12.14□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Gnl1P36916 607 aa12.14□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Plk1Q07832 603 aa12.14□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Znf112Q0VAW7 879 aa12.14□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Nt5c2Q3V1L4 560 aa12.14□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Dpysl3Q62188 570 aa12.14□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Chn2Q80XD1 332 aa12.14□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Impg2Q80XH2 1243 aa12.14□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Tmco6Q8BQX5 494 aa12.14□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Kbtbd13Q8C828 458 aa12.14□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Znf467Q8JZL0 594 aa12.14□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Snapc2Q91XA5 359 aa12.14□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Mphosph6Q9D1Q1 161 aa12.14□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Polr3cQ9D483 533 aa12.14□□□□□ -0.47
Col9a1-202ENSMUST00000088349 PrccQ9EQC8 491 aaKnown RBP12.14□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Rnf25Q9QZR0 456 aa12.14□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Asb1Q9WV74 336 aa12.14□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Gsta4P24472 222 aa12.13□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Sesn2P58043 480 aa12.13□□□□□ -0.47
Col9a1-202ENSMUST00000088349 YwhagP61982 247 aaKnown RBP12.13□□□□□ -0.47
Col9a1-202ENSMUST00000088349 SnrpfP62307 86 aaKnown RBP12.13□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Smad1P70340 465 aa12.13□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Gsdmc4Q3TR54 480 aa12.13□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Pik3r5Q5SW28 871 aa12.13□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Hbs1lQ69ZS7 682 aa12.13□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 18.9 ms