RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Dhtkd1A2ATU0 921 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Krt36B1AQ75 473 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 SgceO70258 437 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Psma3O70435 255 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Rps6ka3P18654 740 aaKnown RBP9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Mat2aQ3THS6 395 aaKnown RBP9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Tubal3Q3UX10 446 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Srbd1Q497V5 1015 aaKnown RBP9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Fam169aQ5XG69 665 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Utf1Q6J1H4 339 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Pias2Q8C5D8 621 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Rtn1Q8K0T0 780 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Cxxc5Q91WA4 317 aaKnown RBP9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Pcdhga6Q91XY2 932 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Uckl1Q91YL3 548 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Chordc1Q9D1P4 331 aaKnown RBP9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Zbtb32Q9JKD9 465 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Srd5a3Q9WUP4 330 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Dyrk1bQ9Z188 629 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Pde8bE9Q4S1 865 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Gm15292L7N231 93 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 MaffO54791 156 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 ByslO54825 436 aaKnown RBP9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Hsf2P38533 535 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Ifit1bl2Q3U687 466 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Hsd3b5Q61694 373 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Epn1Q80VP1 575 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Csgalnact1Q8BJQ9 530 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Ift80Q8K057 777 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Asb2Q8K0L0 634 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 ClyblQ8R4N0 338 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Asxl2Q8BZ32 1370 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Gm4869A0A1B0GSG7 984 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Otud4B2RRE7 1107 aaKnown RBP9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Casp8O89110 480 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Nr2f2P43135 414 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 LtbrP50284 415 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 DmpkP54265 631 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Mc1rQ01727 315 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Rac2Q05144 192 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Grid2ipQ0QWG9 1203 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Mcm10Q0VBD2 885 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Ano7Q14AT5 859 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Tex52Q3TTI8 308 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Prmt9Q3U3W5 846 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Trpc5osQ3UHV4 110 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 TceancQ3US16 359 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Q8CIL4 281 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Pcdhgb4Q91XX6 912 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Rgs1Q9JL25 209 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Srcin1Q9QWI6 1250 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Krt71Q9R0H5 524 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Lrrc73B2RWC4 316 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 DgkdE9PUQ8 1220 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Mtnd3P03899 115 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Ercc5P35689 1170 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 AcadmP45952 421 aaKnown RBP9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Rad23bP54728 416 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Ppp1r13lQ5I1X5 824 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Cyfip2Q5SQX6 1253 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Kcnip4Q6PHZ8 250 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Olfr293Q7TS10 336 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Fmo2Q8K2I3 535 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Lrrc8cQ8R502 803 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Pcdhb13Q91Y06 796 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Dnajc5bQ9CQ94 199 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Aif1lQ9EQX4 150 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Gm5415E9PXF3 478 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Sult3a2G5E904 293 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Pot1bH7BX60 640 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 IkbkbO88351 757 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Cdo1P60334 200 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Pstpip1P97814 415 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Esyt1Q3U7R1 1092 aaKnown RBP9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Lrrc8bQ5DU41 803 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Haus6Q6NV99 933 aaKnown RBP9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Rtl3Q6P1Y1 553 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Dzip3Q7TPV2 1204 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Luzp2Q8BGY3 345 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Zcchc3Q8BPK2 400 aaKnown RBP9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Gpr61Q8C010 449 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Plcl2Q8K394 1128 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Snapc2Q91XA5 359 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Card14Q99KF0 999 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Naalad2Q9CZR2 740 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 EurlQ9D7G4 290 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Cnga3Q9JJZ8 631 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Phtf1Q9QZ09 761 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Hipk2Q9QZR5 1196 aa9.35□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Tceal7A3KGA4 98 aa9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Adamts3E9Q287 1204 aa9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 InhbaQ04998 424 aa9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Itga7Q61738 1179 aa9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Rhbdf1Q6PIX5 856 aa9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Q8BGN9 141 aa9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Trmt10aQ8C1Z8 328 aaKnown RBP9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Map2k7Q8CE90 535 aa9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 MafaQ8CF90 359 aa9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Dis3l2Q8CI75 870 aaKnown RBP9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Coq6Q8R1S0 476 aa9.34□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 29.2 ms