RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Adcy6Q01341 1165 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Dpcr1Q3TNW5 500 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Defa-rs10Q64263 91 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Cfap97Q6ZPR1 541 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Olfr1046Q7TR79 316 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Stk38lQ7TSE6 464 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Ublcp1Q8BGR9 318 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Anks1bQ8BIZ1 1259 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Art3Q8R2G4 371 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Olfr385Q8VGT1 312 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Vps36Q91XD6 386 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Pde6cQ91ZQ1 861 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Ctnnbl1Q9CWL8 563 aaKnown RBP7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Pds5aQ6A026 1332 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Myl4P09541 193 aaKnown RBP7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Irf8P23611 424 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Aff3P51827 1254 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Myo1fP70248 1099 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Tubb5P99024 444 aaKnown RBP7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Tmem109Q3UBX0 243 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Yipf3Q3UDR8 347 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Zcchc2Q69ZB8 1166 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 AarsQ8BGQ7 968 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Taf2Q8C176 1104 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Rassf9Q8K342 435 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Atg13Q91YI1 516 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Epm2aQ9WUA5 330 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Slc12a7Q9WVL3 1083 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Fam129cD3YZB0 591 aa7.29□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Gm17535J3KMR8 224 aa7.29□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Vmn2r1O70410 912 aa7.29□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Vamp7P70280 220 aa7.29□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Znf354cQ571J5 560 aa7.29□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Cd6Q61003 665 aa7.29□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Ovgp1Q62010 721 aa7.29□□□□□ -1.24
Bdnf-201ENSMUST00000053317 PrcpQ7TMR0 491 aa7.29□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Zdhhc19Q810M5 347 aa7.29□□□□□ -1.24
Bdnf-201ENSMUST00000053317 GnsQ8BFR4 544 aa7.29□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Enox1Q8BHR2 643 aaKnown RBP7.29□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Adgrg3Q8R0T6 542 aa7.29□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Pcdhb19Q91Y01 801 aa7.29□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Chst12Q99LL3 419 aa7.29□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Trmt11Q9CWH5 460 aa7.29□□□□□ -1.24
Bdnf-201ENSMUST00000053317 AticQ9CWJ9 592 aaKnown RBP7.29□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Acsl3Q9CZW4 720 aaKnown RBP7.29□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Rilpl1Q9JJC6 406 aa7.29□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Cpsf3Q9QXK7 684 aa7.29□□□□□ -1.24
Bdnf-201ENSMUST00000053317 SufuQ9Z0P7 484 aa7.29□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Gm5580A0A0N4SVP8 411 aa7.29□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Zscan4-ps2A0A1C7CYU6 506 aa7.29□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Tldc2A2ACG1 198 aa7.29□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Tatdn2B7ZNL9 783 aaKnown RBP7.29□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Gna15P30678 374 aa7.29□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Ctnnd1P30999 938 aaKnown RBP7.29□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Slc26a2Q62273 739 aa7.29□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Rbm12b2Q66JV4 834 aaKnown RBP7.29□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Ccdc25Q78PG9 208 aa7.29□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Mib1Q80SY4 1006 aa7.29□□□□□ -1.24
Bdnf-201ENSMUST00000053317 HhatQ8BMT9 499 aa7.29□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Samd7Q8C8Y5 445 aa7.29□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Q8VDP2 222 aa7.29□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Osbpl1aQ91XL9 950 aa7.29□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Cmtr1Q9DBC3 837 aa7.29□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Vmn1r65Q9EPS7 332 aa7.29□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Cntn6Q9JMB8 1028 aa7.29□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Padi3Q9Z184 664 aa7.29□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Uso1Q9Z1Z0 959 aaKnown RBP7.29□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Gm28919A0A087WP35 240 aa7.29□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Prdm12A2AJ77 365 aa7.29□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Vmn2r63E9Q0K5 859 aa7.29□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Gm9268E9Q0M3 861 aa7.29□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Vmn2r62K7N712 859 aa7.29□□□□□ -1.24
Bdnf-201ENSMUST00000053317 DtnbO70585 659 aa7.29□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Abcb1bP06795 1276 aa7.29□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Ms4a1P19437 291 aa7.29□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Ercc5P35689 1170 aa7.29□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Cd163Q2VLH6 1121 aa7.29□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Usp13Q5BKP2 858 aa7.29□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Cyfip2Q5SQX6 1253 aa7.29□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Tas2r134Q7TQB0 298 aa7.29□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Q922C1 641 aa7.29□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Lztr1Q9CQ33 837 aa7.29□□□□□ -1.24
Bdnf-201ENSMUST00000053317 KynuQ9CXF0 464 aa7.29□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Kank3Q9Z1P7 791 aa7.29□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Sept3Q9Z1S5 350 aa7.29□□□□□ -1.24
Bdnf-201ENSMUST00000053317 A0A286YCQ6 122 aa7.28□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Lmo2P25801 158 aa7.28□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Adssl1P28650 457 aa7.28□□□□□ -1.24
Bdnf-201ENSMUST00000053317 rp9P97762 213 aa7.28□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Afg1lQ3V384 480 aa7.28□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Lrfn2Q80TG9 788 aa7.28□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Ttc26Q8BS45 554 aa7.28□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Etf1Q8BWY3 437 aaKnown RBP7.28□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Cpa5Q8R4H4 436 aa7.28□□□□□ -1.24
Bdnf-201ENSMUST00000053317 4930519G04RikQ9CPT7 205 aa7.28□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Erp44Q9D1Q6 406 aa7.28□□□□□ -1.24
Bdnf-201ENSMUST00000053317 IqcdQ9D3V1 458 aa7.28□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Drap1Q9D6N5 205 aa7.28□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Rnf6Q9DBU5 667 aa7.28□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Gm4846B2RWH8 538 aa7.28□□□□□ -1.24
Retrieved 100 of 22,080 RNA–protein pairs in 37.5 ms