RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Mov10P23249 1004 aaKnown RBP17.27■□□□□ 0.35
Shh-201ENSMUST00000002708 VdrP48281 422 aa17.27■□□□□ 0.35
Shh-201ENSMUST00000002708 Hcls1P49710 486 aaKnown RBP17.27■□□□□ 0.35
Shh-201ENSMUST00000002708 Irf6P97431 467 aa17.27■□□□□ 0.35
Shh-201ENSMUST00000002708 Runx2Q08775 607 aa17.27■□□□□ 0.35
Shh-201ENSMUST00000002708 Tmem63bQ3TWI9 832 aa17.27■□□□□ 0.35
Shh-201ENSMUST00000002708 Plppr4Q7TME0 766 aa17.27■□□□□ 0.35
Shh-201ENSMUST00000002708 Ush1gQ80T11 461 aa17.27■□□□□ 0.35
Shh-201ENSMUST00000002708 Mrpl58Q8R035 206 aa17.27■□□□□ 0.35
Shh-201ENSMUST00000002708 NelfcdQ922L6 591 aa17.27■□□□□ 0.35
Shh-201ENSMUST00000002708 Tmem174Q9DCX7 243 aa17.27■□□□□ 0.35
Shh-201ENSMUST00000002708 Dgcr8Q9EQM6 773 aa17.27■□□□□ 0.35
Shh-201ENSMUST00000002708 SktA2AQ25 1946 aaKnown RBP17.27■□□□□ 0.35
Shh-201ENSMUST00000002708 AspgA0JNU3 564 aa17.26■□□□□ 0.35
Shh-201ENSMUST00000002708 Itpripl1A2ASA8 547 aa17.26■□□□□ 0.35
Shh-201ENSMUST00000002708 Uchl4P58321 233 aa17.26■□□□□ 0.35
Shh-201ENSMUST00000002708 Ptgs2Q05769 604 aa17.26■□□□□ 0.35
Shh-201ENSMUST00000002708 Dzip3Q7TPV2 1204 aa17.26■□□□□ 0.35
Shh-201ENSMUST00000002708 Frmd4aQ8BIE6 1020 aa17.26■□□□□ 0.35
Shh-201ENSMUST00000002708 Hsdl1Q8BTX9 330 aa17.26■□□□□ 0.35
Shh-201ENSMUST00000002708 Dnali1Q8BVN8 258 aa17.26■□□□□ 0.35
Shh-201ENSMUST00000002708 Il33Q8BVZ5 266 aa17.26■□□□□ 0.35
Shh-201ENSMUST00000002708 Vta1Q9CR26 309 aa17.26■□□□□ 0.35
Shh-201ENSMUST00000002708 Terb2Q9D494 218 aa17.26■□□□□ 0.35
Shh-201ENSMUST00000002708 Cyp39a1Q9JKJ9 470 aa17.26■□□□□ 0.35
Shh-201ENSMUST00000002708 Trpc5Q9QX29 975 aa17.26■□□□□ 0.35
Shh-201ENSMUST00000002708 IqccA2ADZ8 418 aa17.26■□□□□ 0.35
Shh-201ENSMUST00000002708 Ttc17E9PVB5 1198 aa17.26■□□□□ 0.35
Shh-201ENSMUST00000002708 Dusp8O09112 663 aa17.26■□□□□ 0.35
Shh-201ENSMUST00000002708 Fgf15O35622 218 aa17.26■□□□□ 0.35
Shh-201ENSMUST00000002708 Ly9Q01965 654 aa17.26■□□□□ 0.35
Shh-201ENSMUST00000002708 Neto2Q8BNJ6 525 aa17.26■□□□□ 0.35
Shh-201ENSMUST00000002708 Trerf1Q8BXJ2 1205 aa17.26■□□□□ 0.35
Shh-201ENSMUST00000002708 Ccser1Q8C0C4 895 aa17.26■□□□□ 0.35
Shh-201ENSMUST00000002708 Prpf31Q8CCF0 499 aaKnown RBP17.26■□□□□ 0.35
Shh-201ENSMUST00000002708 Pde6cQ91ZQ1 861 aa17.26■□□□□ 0.35
Shh-201ENSMUST00000002708 Slc12a9Q99MR3 914 aa17.26■□□□□ 0.35
Shh-201ENSMUST00000002708 Subh2bvQ9D9Z7 123 aa17.26■□□□□ 0.35
Shh-201ENSMUST00000002708 Rsrc1Q9DBU6 334 aa17.26■□□□□ 0.35
Shh-201ENSMUST00000002708 Adrm1Q9JKV1 407 aa17.26■□□□□ 0.35
Shh-201ENSMUST00000002708 Cdr2lA2A6T1 465 aa17.25■□□□□ 0.35
Shh-201ENSMUST00000002708 Gm6583E9Q8Z1 469 aa17.25■□□□□ 0.35
Shh-201ENSMUST00000002708 Myl2P51667 166 aa17.25■□□□□ 0.35
Shh-201ENSMUST00000002708 Hbs1lQ69ZS7 682 aa17.25■□□□□ 0.35
Shh-201ENSMUST00000002708 Cdc14aQ6GQT0 603 aa17.25■□□□□ 0.35
Shh-201ENSMUST00000002708 Orai3Q6P8G8 290 aa17.25■□□□□ 0.35
Shh-201ENSMUST00000002708 C2cd5Q7TPS5 1016 aaKnown RBP17.25■□□□□ 0.35
Shh-201ENSMUST00000002708 Slitrk1Q810C1 696 aa17.25■□□□□ 0.35
Shh-201ENSMUST00000002708 Trim68Q8K243 485 aa17.25■□□□□ 0.35
Shh-201ENSMUST00000002708 Castor1Q9CWQ8 331 aa17.25■□□□□ 0.35
Shh-201ENSMUST00000002708 Atp6v1g2Q9WTT4 118 aa17.25■□□□□ 0.35
Shh-201ENSMUST00000002708 Asb1Q9WV74 336 aa17.25■□□□□ 0.35
Shh-201ENSMUST00000002708 Sgk1Q9WVC6 431 aa17.25■□□□□ 0.35
Shh-201ENSMUST00000002708 Card9A2AIV8 536 aa17.25■□□□□ 0.35
Shh-201ENSMUST00000002708 Mocs3A2BDX3 460 aaKnown RBP17.25■□□□□ 0.35
Shh-201ENSMUST00000002708 Prom1O54990 867 aa17.25■□□□□ 0.35
Shh-201ENSMUST00000002708 EpoP07321 192 aa17.25■□□□□ 0.35
Shh-201ENSMUST00000002708 Tgfb2P27090 414 aa17.25■□□□□ 0.35
Shh-201ENSMUST00000002708 Kif5aP33175 1027 aa17.25■□□□□ 0.35
Shh-201ENSMUST00000002708 Gbp1Q01514 589 aa17.25■□□□□ 0.35
Shh-201ENSMUST00000002708 EnahQ03173 802 aa17.25■□□□□ 0.35
Shh-201ENSMUST00000002708 Myl6Q60605 151 aaKnown RBP17.25■□□□□ 0.35
Shh-201ENSMUST00000002708 Acvrl1Q61288 502 aa17.25■□□□□ 0.35
Shh-201ENSMUST00000002708 Nudt16Q6P3D0 195 aa17.25■□□□□ 0.35
Shh-201ENSMUST00000002708 Tdpoz2Q717B2 364 aa17.25■□□□□ 0.35
Shh-201ENSMUST00000002708 MgarpQ8VI64 283 aa17.25■□□□□ 0.35
Shh-201ENSMUST00000002708 Rin1Q921Q7 763 aa17.25■□□□□ 0.35
Shh-201ENSMUST00000002708 Tmem68Q9D850 329 aa17.25■□□□□ 0.35
Shh-201ENSMUST00000002708 Cib2Q9Z309 187 aa17.25■□□□□ 0.35
Shh-201ENSMUST00000002708 Tldc2A2ACG1 198 aa17.25■□□□□ 0.35
Shh-201ENSMUST00000002708 Itga9B8JK39 1036 aa17.25■□□□□ 0.35
Shh-201ENSMUST00000002708 Lonrf1D3YY23 762 aa17.25■□□□□ 0.35
Shh-201ENSMUST00000002708 GclmO09172 274 aaKnown RBP17.25■□□□□ 0.35
Shh-201ENSMUST00000002708 Klf1P46099 358 aa17.25■□□□□ 0.35
Shh-201ENSMUST00000002708 Cav1P49817 178 aa17.25■□□□□ 0.35
Shh-201ENSMUST00000002708 Pde1bQ01065 535 aa17.25■□□□□ 0.35
Shh-201ENSMUST00000002708 Grb7Q03160 535 aa17.25■□□□□ 0.35
Shh-201ENSMUST00000002708 Gm4952Q5FW57 296 aa17.25■□□□□ 0.35
Shh-201ENSMUST00000002708 Spata24Q6P926 205 aa17.25■□□□□ 0.35
Shh-201ENSMUST00000002708 6820408C15RikQ8BJX2 354 aa17.25■□□□□ 0.35
Shh-201ENSMUST00000002708 Hectd2Q8CDU6 774 aa17.25■□□□□ 0.35
Shh-201ENSMUST00000002708 Rpp40Q8R1F9 363 aa17.25■□□□□ 0.35
Shh-201ENSMUST00000002708 Sec63Q8VHE0 760 aaKnown RBP17.25■□□□□ 0.35
Shh-201ENSMUST00000002708 Ptdss1Q99LH2 473 aaKnown RBP17.25■□□□□ 0.35
Shh-201ENSMUST00000002708 AticQ9CWJ9 592 aaKnown RBP17.25■□□□□ 0.35
Shh-201ENSMUST00000002708 Iqcj-Schip1A0A088MLT8 559 aa17.24■□□□□ 0.35
Shh-201ENSMUST00000002708 Gm11985A0A1B0GS61 206 aa17.24■□□□□ 0.35
Shh-201ENSMUST00000002708 Schip1P0DPB4 484 aa17.24■□□□□ 0.35
Shh-201ENSMUST00000002708 Aimp1P31230 310 aaKnown RBP17.24■□□□□ 0.35
Shh-201ENSMUST00000002708 Cdk16Q04735 496 aa17.24■□□□□ 0.35
Shh-201ENSMUST00000002708 GsapQ3TCV3 858 aa17.24■□□□□ 0.35
Shh-201ENSMUST00000002708 Nt5dc3Q3UHB1 546 aa17.24■□□□□ 0.35
Shh-201ENSMUST00000002708 Grb10Q60760 621 aa17.24■□□□□ 0.35
Shh-201ENSMUST00000002708 Sh3gl3Q62421 347 aa17.24■□□□□ 0.35
Shh-201ENSMUST00000002708 Atl2Q6PA06 583 aa17.24■□□□□ 0.35
Shh-201ENSMUST00000002708 Znf76Q8BMU0 568 aa17.24■□□□□ 0.35
Shh-201ENSMUST00000002708 Anapc7Q9WVM3 565 aa17.24■□□□□ 0.35
Shh-201ENSMUST00000002708 Gm44503E9PYU5 387 aa17.24■□□□□ 0.35
Shh-201ENSMUST00000002708 Serpinb3aG3X9V8 387 aa17.24■□□□□ 0.35
Shh-201ENSMUST00000002708 Impa1O55023 277 aa17.24■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 38.4 ms