RNA–Protein interactions for RNA: YNL278W

CAF120, Transcript of Part of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF120, Length 3,183 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF120YNL278W YLL067W-AP0CY01 160 aa2.35□□□□□ -2.03
CAF120YNL278W TIR1P10863 254 aa2.35□□□□□ -2.03
CAF120YNL278W SNC2P33328 115 aa2.35□□□□□ -2.03
CAF120YNL278W MTR2P34232 184 aaKnown RBP2.35□□□□□ -2.03
CAF120YNL278W SOR1P35497 357 aaKnown RBP2.35□□□□□ -2.03
CAF120YNL278W TIF34P40217 347 aaKnown RBP2.35□□□□□ -2.03
CAF120YNL278W BUL1P48524 976 aa2.35□□□□□ -2.03
CAF120YNL278W MNN10P50108 393 aaKnown RBP2.35□□□□□ -2.03
CAF120YNL278W HEM25Q07534 307 aa2.35□□□□□ -2.03
CAF120YNL278W SOR2Q07786 357 aa2.35□□□□□ -2.03
CAF120YNL278W UBI4P0CG63 381 aaKnown RBP2.35□□□□□ -2.03
CAF120YNL278W BGL2P15703 313 aaKnown RBP2.35□□□□□ -2.03
CAF120YNL278W LSB5P25369 354 aa2.35□□□□□ -2.03
CAF120YNL278W TRX3P25372 127 aa2.35□□□□□ -2.03
CAF120YNL278W ARO2P28777 376 aaKnown RBP2.35□□□□□ -2.03
CAF120YNL278W SHE1P38200 338 aa2.35□□□□□ -2.03
CAF120YNL278W YHL037CP38733 133 aa2.35□□□□□ -2.03
CAF120YNL278W LYS1P38998 373 aaRIP-Chip data2.35□□□□□ -2.03not detected
CAF120YNL278W DLS1P40366 167 aa2.35□□□□□ -2.03
CAF120YNL278W TAD2P47058 250 aa2.35□□□□□ -2.03
CAF120YNL278W LST7P53237 242 aa2.35□□□□□ -2.03
CAF120YNL278W ERP1Q05359 219 aaKnown RBP2.35□□□□□ -2.03
CAF120YNL278W YHC1Q05900 231 aaKnown RBP2.35□□□□□ -2.03
CAF120YNL278W ANT1Q06497 328 aa2.35□□□□□ -2.03
CAF120YNL278W ENB1Q08299 606 aa2.35□□□□□ -2.03
CAF120YNL278W FDH1Q08911 376 aa2.35□□□□□ -2.03
CAF120YNL278W COA6Q3E846 104 aa2.35□□□□□ -2.03
CAF120YNL278W YEL009C-AA0A023PZF2 135 aa2.34□□□□□ -2.03
CAF120YNL278W YER190C-BP0CX94 160 aa2.34□□□□□ -2.03
CAF120YNL278W YEL077W-AP0CX95 160 aa2.34□□□□□ -2.03
CAF120YNL278W YGR296C-BP0CX96 160 aa2.34□□□□□ -2.03
CAF120YNL278W YPL283W-BP0CX97 160 aa2.34□□□□□ -2.03
CAF120YNL278W YPR204C-AP0CX98 160 aa2.34□□□□□ -2.03
CAF120YNL278W ERG24P32462 438 aaKnown RBP2.34□□□□□ -2.03
CAF120YNL278W YNK1P36010 153 aaKnown RBP2.34□□□□□ -2.03
CAF120YNL278W PAU24P38155 120 aa2.34□□□□□ -2.03
CAF120YNL278W YBR013CP38215 129 aa2.34□□□□□ -2.03
CAF120YNL278W GPI15P53961 229 aa2.34□□□□□ -2.03
CAF120YNL278W PBP4Q07362 185 aaKnown RBP2.34□□□□□ -2.03
CAF120YNL278W YPL264CQ08980 353 aa2.34□□□□□ -2.03
CAF120YNL278W MCT1Q12283 360 aa2.34□□□□□ -2.03
CAF120YNL278W YOR343CQ12484 108 aa2.34□□□□□ -2.03
CAF120YNL278W VMA9Q3E7B6 73 aa2.34□□□□□ -2.03
CAF120YNL278W RPL9AP05738 191 aaKnown RBP2.34□□□□□ -2.04
CAF120YNL278W SPT15P13393 240 aaKnown RBP2.34□□□□□ -2.04
CAF120YNL278W PEX34P25584 144 aa2.34□□□□□ -2.04
CAF120YNL278W OMA1P36163 345 aa2.34□□□□□ -2.04
CAF120YNL278W YHL044WP38727 235 aa2.34□□□□□ -2.04
CAF120YNL278W PCL5P38794 229 aa2.34□□□□□ -2.04
CAF120YNL278W ASP1P38986 381 aaPredicted RBP2.34□□□□□ -2.04
CAF120YNL278W SAS2P40963 338 aa2.34□□□□□ -2.04
CAF120YNL278W TES1P41903 349 aaKnown RBP2.34□□□□□ -2.04
CAF120YNL278W RPL9BP51401 191 aaKnown RBP2.34□□□□□ -2.04
CAF120YNL278W YIF1P53845 314 aaKnown RBP2.34□□□□□ -2.04
CAF120YNL278W HSK3P69852 69 aa2.34□□□□□ -2.04
CAF120YNL278W SCS7Q03529 384 aa2.34□□□□□ -2.04
CAF120YNL278W PIN3Q06449 215 aa2.34□□□□□ -2.04
CAF120YNL278W CYC7P00045 113 aa2.33□□□□□ -2.04
CAF120YNL278W RAD52P06778 471 aaKnown RBP2.33□□□□□ -2.04
CAF120YNL278W PPH21P23594 369 aa2.33□□□□□ -2.04
CAF120YNL278W MXR2P25566 168 aa2.33□□□□□ -2.04
CAF120YNL278W COQ3P27680 312 aa2.33□□□□□ -2.04
CAF120YNL278W TIM12P32830 109 aa2.33□□□□□ -2.04
CAF120YNL278W LAG1P38703 411 aa2.33□□□□□ -2.04
CAF120YNL278W MDM31P38880 579 aa2.33□□□□□ -2.04
CAF120YNL278W TIM13P53299 105 aa2.33□□□□□ -2.04
CAF120YNL278W MRX11Q03079 207 aa2.33□□□□□ -2.04
CAF120YNL278W SHH3Q04487 196 aa2.33□□□□□ -2.04
CAF120YNL278W LOA1Q06508 300 aa2.33□□□□□ -2.04
CAF120YNL278W RDL1Q12305 139 aaKnown RBP2.33□□□□□ -2.04
CAF120YNL278W SUS1Q6WNK7 96 aa2.33□□□□□ -2.04
CAF120YNL278W RPS22AP0C0W1 130 aaKnown RBP2.33□□□□□ -2.04
CAF120YNL278W RPS2P25443 254 aaKnown RBP2.33□□□□□ -2.04
CAF120YNL278W SRB6P32570 121 aa2.33□□□□□ -2.04
CAF120YNL278W INM1P38710 295 aa2.33□□□□□ -2.04
CAF120YNL278W YHR035WP38769 630 aa2.33□□□□□ -2.04
CAF120YNL278W XPT1P47165 209 aa2.33□□□□□ -2.04
CAF120YNL278W ERG26P53199 349 aaKnown RBP2.33□□□□□ -2.04
CAF120YNL278W SWS2P53937 143 aa2.33□□□□□ -2.04
CAF120YNL278W RCE1Q03530 315 aa2.33□□□□□ -2.04
CAF120YNL278W ATG10Q07879 167 aa2.33□□□□□ -2.04
CAF120YNL278W IGO2Q9P305 131 aa2.33□□□□□ -2.04
CAF120YNL278W RAS2P01120 322 aaKnown RBP2.33□□□□□ -2.04
CAF120YNL278W OPI3P05375 206 aa2.33□□□□□ -2.04
CAF120YNL278W YBR292CP38357 123 aa2.33□□□□□ -2.04
CAF120YNL278W OST3P48439 350 aa2.33□□□□□ -2.04
CAF120YNL278W AIM11P87275 137 aa2.33□□□□□ -2.04
CAF120YNL278W COF1Q03048 143 aaKnown RBP2.33□□□□□ -2.04
CAF120YNL278W ISD11Q6Q560 94 aa2.33□□□□□ -2.04
CAF120YNL278W YPL229WQ99395 206 aa2.33□□□□□ -2.04
CAF120YNL278W PBI2P0CT04 75 aaKnown RBP2.32□□□□□ -2.04
CAF120YNL278W YCR007CP25354 239 aa2.32□□□□□ -2.04
CAF120YNL278W SRY1P36007 326 aa2.32□□□□□ -2.04
CAF120YNL278W ECM33P38248 429 aaKnown RBP2.32□□□□□ -2.04
CAF120YNL278W ARC40P38328 384 aaKnown RBP2.32□□□□□ -2.04
CAF120YNL278W PEX22P39718 180 aa2.32□□□□□ -2.04
CAF120YNL278W LCB3P47013 409 aa2.32□□□□□ -2.04
CAF120YNL278W YMR166CQ03829 368 aa2.32□□□□□ -2.04
CAF120YNL278W UTP15Q04305 513 aaKnown RBP2.32□□□□□ -2.04
CAF120YNL278W LIP2Q06005 328 aa2.32□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 8.6 ms