RNA–Protein interactions for RNA: YLR164W

SHH4, Transcript of Putative alternate subunit of succinate dehydrogenase (SDH), yeastyeast

Gene SHH4, Length 507 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH4YLR164W YPT31P38555 223 aaKnown RBP8.04□□□□□ -1.12
SHH4YLR164W TMA23Q03525 211 aa8.04□□□□□ -1.12
SHH4YLR164W AVO2Q04749 426 aa8.04□□□□□ -1.12
SHH4YLR164W YLR179CQ06252 201 aaKnown RBP8.04□□□□□ -1.12
SHH4YLR164W RRP15Q06511 250 aaPredicted RBP8.04□□□□□ -1.12
SHH4YLR164W CTR3Q06686 241 aa8.04□□□□□ -1.12
SHH4YLR164W POS5Q06892 414 aa8.04□□□□□ -1.12
SHH4YLR164W SDO1Q07953 250 aaKnown RBP8.04□□□□□ -1.12
SHH4YLR164W IRC23Q08416 157 aa8.04□□□□□ -1.12
SHH4YLR164W RPL14AP36105 138 aaKnown RBP8.03□□□□□ -1.12
SHH4YLR164W RPL14BP38754 138 aaKnown RBP8.03□□□□□ -1.12
SHH4YLR164W YJL163CP46996 555 aa8.03□□□□□ -1.12
SHH4YLR164W SSU72P53538 206 aaPredicted RBP8.03□□□□□ -1.12
SHH4YLR164W MRP2P10663 115 aaPredicted RBP8.02□□□□□ -1.13
SHH4YLR164W DAL3P32459 195 aa8.02□□□□□ -1.13
SHH4YLR164W YBR292CP38357 123 aa8.02□□□□□ -1.13
SHH4YLR164W YGR018CP53211 109 aa8.02□□□□□ -1.13
SHH4YLR164W BOR1P53838 576 aa8.02□□□□□ -1.13
SHH4YLR164W YML122CQ03207 126 aa8.02□□□□□ -1.13
SHH4YLR164W TRP4P07285 380 aaPredicted RBP8.01□□□□□ -1.13
SHH4YLR164W PHO85P17157 305 aa8.01□□□□□ -1.13
SHH4YLR164W YPS1P32329 569 aa8.01□□□□□ -1.13
SHH4YLR164W RAD23P32628 398 aaKnown RBP8.01□□□□□ -1.13
SHH4YLR164W YAR068WP39564 161 aa8.01□□□□□ -1.13
SHH4YLR164W NOP16P40007 231 aaKnown RBP8.01□□□□□ -1.13
SHH4YLR164W GPP2P40106 250 aaKnown RBP8.01□□□□□ -1.13
SHH4YLR164W YIL024CP40543 189 aa8.01□□□□□ -1.13
SHH4YLR164W AIR2Q12476 344 aaKnown RBP8.01□□□□□ -1.13
SHH4YLR164W TOM40P23644 387 aaKnown RBP8□□□□□ -1.13
SHH4YLR164W YCR022CP25620 114 aa8□□□□□ -1.13
SHH4YLR164W LDS1P31379 325 aa8□□□□□ -1.13
SHH4YLR164W SRB6P32570 121 aa8□□□□□ -1.13
SHH4YLR164W YFL054CP43549 646 aa8□□□□□ -1.13
SHH4YLR164W BNA1P47096 177 aa8□□□□□ -1.13
SHH4YLR164W PUS4P48567 403 aaKnown RBP8□□□□□ -1.13
SHH4YLR164W SHH3Q04487 196 aa8□□□□□ -1.13
SHH4YLR164W PBP4Q07362 185 aaKnown RBP8□□□□□ -1.13
SHH4YLR164W PAA1Q12447 191 aaKnown RBP8□□□□□ -1.13
SHH4YLR164W PIS1P06197 220 aaKnown RBP7.99□□□□□ -1.13
SHH4YLR164W QCR9P22289 66 aa7.99□□□□□ -1.13
SHH4YLR164W CNB1P25296 175 aa7.99□□□□□ -1.13
SHH4YLR164W SHB17P36136 271 aaKnown RBP7.99□□□□□ -1.13
SHH4YLR164W DER1P38307 211 aa7.99□□□□□ -1.13
SHH4YLR164W RTC3P38804 111 aaPredicted RBP7.99□□□□□ -1.13
SHH4YLR164W BDH1P39714 382 aa7.99□□□□□ -1.13
SHH4YLR164W SNO1Q03144 224 aa7.99□□□□□ -1.13
SHH4YLR164W YMR253CQ04835 414 aa7.99□□□□□ -1.13
SHH4YLR164W RXT3Q07458 294 aa7.99□□□□□ -1.13
SHH4YLR164W RKI1Q12189 258 aa7.99□□□□□ -1.13
SHH4YLR164W RTG1P32607 177 aa7.98□□□□□ -1.13
SHH4YLR164W MRPL38P35996 138 aaPredicted RBP7.98□□□□□ -1.13
SHH4YLR164W SHG1P38337 142 aa7.98□□□□□ -1.13
SHH4YLR164W TAX4P47030 604 aa7.98□□□□□ -1.13
SHH4YLR164W MIC27P50945 234 aa7.98□□□□□ -1.13
SHH4YLR164W LST7P53237 242 aa7.98□□□□□ -1.13
SHH4YLR164W YOR352WQ08816 343 aa7.98□□□□□ -1.13
SHH4YLR164W PCC1Q3E833 88 aa7.98□□□□□ -1.13
SHH4YLR164W RIB5P38145 238 aa7.97□□□□□ -1.13
SHH4YLR164W YBL071CP38185 102 aa7.97□□□□□ -1.13
SHH4YLR164W CSH1P38287 376 aa7.97□□□□□ -1.13
SHH4YLR164W PRE3P38624 215 aa7.97□□□□□ -1.13
SHH4YLR164W PTC7P38797 343 aa7.97□□□□□ -1.13
SHH4YLR164W RIB4P50861 169 aaPredicted RBP7.97□□□□□ -1.13
SHH4YLR164W YPL108WQ02872 168 aaPredicted RBP7.97□□□□□ -1.13
SHH4YLR164W SRL1Q08673 210 aa7.97□□□□□ -1.13
SHH4YLR164W RAD28Q12021 506 aa7.97□□□□□ -1.13
SHH4YLR164W ERV2Q12284 196 aa7.97□□□□□ -1.13
SHH4YLR164W SME1Q12330 94 aaPredicted RBP7.97□□□□□ -1.13
SHH4YLR164W TY1A-LR4P0C2I8 440 aaKnown RBP7.96□□□□□ -1.14
SHH4YLR164W TY1A-DR6P0CX70 440 aa7.96□□□□□ -1.14
SHH4YLR164W TY1A-ER1P0CX71 440 aa7.96□□□□□ -1.14
SHH4YLR164W TY1A-LR2P0CX72 440 aa7.96□□□□□ -1.14
SHH4YLR164W TY1A-PLP0CX73 440 aa7.96□□□□□ -1.14
SHH4YLR164W TY1A-JR1P0CX74 440 aa7.96□□□□□ -1.14
SHH4YLR164W TY1A-LR3P0CX75 440 aa7.96□□□□□ -1.14
SHH4YLR164W TY1A-ML2P0CX76 440 aa7.96□□□□□ -1.14
SHH4YLR164W SMD3P43321 101 aaKnown RBP7.96□□□□□ -1.14
SHH4YLR164W LOC1P43586 204 aaPredicted RBP7.96□□□□□ -1.14
SHH4YLR164W PAU4P53427 120 aa7.96□□□□□ -1.14
SHH4YLR164W TY1A-GR1Q12085 440 aa7.96□□□□□ -1.14
SHH4YLR164W TY1A-PR3Q6Q5H1 440 aaKnown RBP7.96□□□□□ -1.14
SHH4YLR164W TY1A-OLQ92392 440 aaKnown RBP7.96□□□□□ -1.14
SHH4YLR164W CCW14O13547 238 aa7.95□□□□□ -1.14
SHH4YLR164W RPL15AP05748 204 aaKnown RBP7.95□□□□□ -1.14
SHH4YLR164W ILV5P06168 395 aaKnown RBP7.95□□□□□ -1.14
SHH4YLR164W SUA7P29055 345 aaPredicted RBP7.95□□□□□ -1.14
SHH4YLR164W FPR2P32472 135 aa7.95□□□□□ -1.14
SHH4YLR164W ECM25P32525 599 aa7.95□□□□□ -1.14
SHH4YLR164W RPS0AP32905 252 aaKnown RBP7.95□□□□□ -1.14
SHH4YLR164W MIA40P36046 403 aa7.95□□□□□ -1.14
SHH4YLR164W ATG27P46989 271 aa7.95□□□□□ -1.14
SHH4YLR164W DSK2P48510 373 aa7.95□□□□□ -1.14
SHH4YLR164W YAP1802P53309 568 aa7.95□□□□□ -1.14
SHH4YLR164W RPL15BP54780 204 aaPredicted RBP7.95□□□□□ -1.14
SHH4YLR164W TIM11P81449 96 aaPredicted RBP7.95□□□□□ -1.14
SHH4YLR164W INO2P26798 304 aa7.94□□□□□ -1.14
SHH4YLR164W YCR041WP37265 110 aa7.94□□□□□ -1.14
SHH4YLR164W TRS20P38334 175 aa7.94□□□□□ -1.14
SHH4YLR164W RTS2P40962 232 aa7.94□□□□□ -1.14
SHH4YLR164W CAF40P53829 373 aa7.94□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 404.6 ms